RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 CTSBP07858 339 aa6.57□□□□□ -1.36
VAPA-206ENST00000583475 XRCC5P13010 732 aaKnown RBP6.57□□□□□ -1.36
VAPA-206ENST00000583475 ZNF157P51786 506 aaPredicted RBP6.57□□□□□ -1.36
VAPA-206ENST00000583475 EXOSC6Q5RKV6 272 aaKnown RBP6.57□□□□□ -1.36
VAPA-206ENST00000583475 NPAS4Q8IUM7 802 aa6.57□□□□□ -1.36
VAPA-206ENST00000583475 TMPRSS13Q9BYE2 586 aa6.57□□□□□ -1.36
VAPA-206ENST00000583475 RNF208Q9H0X6 261 aa6.57□□□□□ -1.36
VAPA-206ENST00000583475 ZFYVE1Q9HBF4 777 aa6.57□□□□□ -1.36
VAPA-206ENST00000583475 CYP11A1P05108 521 aa6.56□□□□□ -1.36
VAPA-206ENST00000583475 MAOBP27338 520 aa6.56□□□□□ -1.36
VAPA-206ENST00000583475 POU4F3Q15319 338 aa6.56□□□□□ -1.36
VAPA-206ENST00000583475 CCDC27Q2M243 656 aa6.56□□□□□ -1.36
VAPA-206ENST00000583475 ARMC10Q8N2F6 343 aa6.56□□□□□ -1.36
VAPA-206ENST00000583475 FAM46AQ96IP4 442 aaKnown RBP6.56□□□□□ -1.36
VAPA-206ENST00000583475 CEP41Q9BYV8 373 aa6.56□□□□□ -1.36
VAPA-206ENST00000583475 RNF19AQ9NV58 838 aa6.56□□□□□ -1.36
VAPA-206ENST00000583475 PRPF40AO75400 957 aaKnown RBP6.55□□□□□ -1.36
VAPA-206ENST00000583475 ECEL1O95672 775 aa6.55□□□□□ -1.36
VAPA-206ENST00000583475 EAPPQ56P03 285 aaPredicted RBP6.55□□□□□ -1.36
VAPA-206ENST00000583475 SMG8Q8ND04 991 aaKnown RBP6.55□□□□□ -1.36
VAPA-206ENST00000583475 DDX54Q8TDD1 881 aaKnown RBP6.55□□□□□ -1.36
VAPA-206ENST00000583475 SRCIN1Q9C0H9 1055 aa6.55□□□□□ -1.36
VAPA-206ENST00000583475 SUGCTQ9HAC7 445 aa6.55□□□□□ -1.36
VAPA-206ENST00000583475 AKAP2Q9Y2D5 859 aa6.55□□□□□ -1.36
VAPA-206ENST00000583475 GSTT1P30711 240 aa6.54□□□□□ -1.36
VAPA-206ENST00000583475 PREPP48147 710 aa6.54□□□□□ -1.36
VAPA-206ENST00000583475 NUTM2GQ5VZR2 741 aa6.54□□□□□ -1.36
VAPA-206ENST00000583475 ANKRD34AQ69YU3 496 aa6.54□□□□□ -1.36
VAPA-206ENST00000583475 PRR23CQ6ZRP0 262 aa6.54□□□□□ -1.36
VAPA-206ENST00000583475 C12orf49Q9H741 205 aa6.54□□□□□ -1.36
VAPA-206ENST00000583475 TMEM39AQ9NV64 488 aa6.54□□□□□ -1.36
VAPA-206ENST00000583475 SPG7Q9UQ90 795 aa6.54□□□□□ -1.36
VAPA-206ENST00000583475 TIAF1O95411 115 aa6.53□□□□□ -1.36
VAPA-206ENST00000583475 AP3B2Q13367 1082 aa6.53□□□□□ -1.36
VAPA-206ENST00000583475 FBXO33Q7Z6M2 555 aa6.53□□□□□ -1.36
VAPA-206ENST00000583475 C12orf50Q8NA57 414 aaPredicted RBP6.53□□□□□ -1.36
VAPA-206ENST00000583475 FRMD6Q96NE9 622 aa6.53□□□□□ -1.36
VAPA-206ENST00000583475 DUSP9Q99956 384 aaKnown RBP6.53□□□□□ -1.36
VAPA-206ENST00000583475 CYP4F12Q9HCS2 524 aa6.53□□□□□ -1.36
VAPA-206ENST00000583475 ZBTB7CA1YPR0 619 aa6.52□□□□□ -1.37
VAPA-206ENST00000583475 SART1O43290 800 aaKnown RBP6.52□□□□□ -1.37
VAPA-206ENST00000583475 DRD2P14416 443 aa6.52□□□□□ -1.37
VAPA-206ENST00000583475 GNA15P30679 374 aa6.52□□□□□ -1.37
VAPA-206ENST00000583475 TAGLNQ01995 201 aaKnown RBP6.52□□□□□ -1.37
VAPA-206ENST00000583475 UVSSAQ2YD98 709 aa6.52□□□□□ -1.37
VAPA-206ENST00000583475 PRSS36Q5K4E3 855 aa6.52□□□□□ -1.37
VAPA-206ENST00000583475 FDX2Q6P4F2 183 aa6.52□□□□□ -1.37
VAPA-206ENST00000583475 STK35Q8TDR2 534 aa6.52□□□□□ -1.37
VAPA-206ENST00000583475 ANKRD24Q8TF21 1146 aa6.52□□□□□ -1.37
VAPA-206ENST00000583475 MYRFLQ96LU7 910 aa6.52□□□□□ -1.37
VAPA-206ENST00000583475 NECAB3Q96P71 396 aaPredicted RBP6.52□□□□□ -1.37
VAPA-206ENST00000583475 CORO1BQ9BR76 489 aa6.52□□□□□ -1.37
VAPA-206ENST00000583475 FAM8A1Q9UBU6 413 aa6.52□□□□□ -1.37
VAPA-206ENST00000583475 GPN3Q9UHW5 284 aaPredicted RBP6.52□□□□□ -1.37
VAPA-206ENST00000583475 RAXQ9Y2V3 346 aa6.52□□□□□ -1.37
VAPA-206ENST00000583475 AK5Q9Y6K8 562 aa6.52□□□□□ -1.37
VAPA-206ENST00000583475 DHX15O43143 795 aaKnown RBP6.51□□□□□ -1.37
VAPA-206ENST00000583475 ERCC3P19447 782 aa6.51□□□□□ -1.37
VAPA-206ENST00000583475 FGD1P98174 961 aa6.51□□□□□ -1.37
VAPA-206ENST00000583475 PPP2R3AQ06190 1150 aa6.51□□□□□ -1.37
VAPA-206ENST00000583475 SOX4Q06945 474 aaPredicted RBP6.51□□□□□ -1.37
VAPA-206ENST00000583475 PDZD3Q86UT5 571 aa6.51□□□□□ -1.37
VAPA-206ENST00000583475 FAM20CQ8IXL6 584 aa6.51□□□□□ -1.37
VAPA-206ENST00000583475 UTP4Q969X6 686 aaKnown RBP6.51□□□□□ -1.37
VAPA-206ENST00000583475 PARP2Q9UGN5 583 aa6.51□□□□□ -1.37
VAPA-206ENST00000583475 PPM1HQ9ULR3 514 aa6.51□□□□□ -1.37
VAPA-206ENST00000583475 ENC1O14682 589 aa6.5□□□□□ -1.37
VAPA-206ENST00000583475 USP17L7P0C7H9 530 aa6.5□□□□□ -1.37
VAPA-206ENST00000583475 BMP3P12645 472 aa6.5□□□□□ -1.37
VAPA-206ENST00000583475 ARNTP27540 789 aa6.5□□□□□ -1.37
VAPA-206ENST00000583475 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.5□□□□□ -1.37
VAPA-206ENST00000583475 C2CD4AQ8NCU7 369 aaPredicted RBP6.5□□□□□ -1.37
VAPA-206ENST00000583475 CCDC86Q9H6F5 360 aaKnown RBP6.5□□□□□ -1.37
VAPA-206ENST00000583475 AOC2O75106 756 aa6.49□□□□□ -1.37
VAPA-206ENST00000583475 FBXO24O75426 580 aa6.49□□□□□ -1.37
VAPA-206ENST00000583475 GSTP1P09211 210 aaKnown RBP6.49□□□□□ -1.37
VAPA-206ENST00000583475 LIG1P18858 919 aa6.49□□□□□ -1.37
VAPA-206ENST00000583475 BMP6P22004 513 aa6.49□□□□□ -1.37
VAPA-206ENST00000583475 NME2P22392 152 aa6.49□□□□□ -1.37
VAPA-206ENST00000583475 EIF4BP23588 611 aaKnown RBP6.49□□□□□ -1.37
VAPA-206ENST00000583475 HP1BP3Q5SSJ5 553 aaPredicted RBP6.49□□□□□ -1.37
VAPA-206ENST00000583475 TPTE2Q6XPS3 522 aa6.49□□□□□ -1.37
VAPA-206ENST00000583475 CLEC10AQ8IUN9 316 aa6.49□□□□□ -1.37
VAPA-206ENST00000583475 WDR89Q96FK6 387 aaPredicted RBP6.49□□□□□ -1.37
VAPA-206ENST00000583475 ZC3H12CQ9C0D7 883 aaKnown RBP6.49□□□□□ -1.37
VAPA-206ENST00000583475 CEP44Q9C0F1 390 aa6.49□□□□□ -1.37
VAPA-206ENST00000583475 RAD18Q9NS91 495 aa6.49□□□□□ -1.37
VAPA-206ENST00000583475 STOML1Q9UBI4 398 aa6.49□□□□□ -1.37
VAPA-206ENST00000583475 SYNGAP1Q96PV0 1343 aa6.49□□□□□ -1.37
VAPA-206ENST00000583475 ZNF862O60290 1169 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 PAGE1O75459 146 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 ADH5P11766 374 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 DAB2P98082 770 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 ZNF252P-AS1Q0IIN9 211 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 PDE3AQ14432 1141 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 SGO2Q562F6 1265 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 AKAP4Q5JQC9 854 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 SULF2Q8IWU5 870 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 TRIM42Q8IWZ5 723 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 FAM83CQ9BQN1 747 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms