RNA–Protein interactions for RNA: ENST00000583211.5

LIMD2-211, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-211ENST00000583211 CFAP100Q494V2 611 aa22.31■■□□□ 1.16
LIMD2-211ENST00000583211 CDC37L1Q7L3B6 337 aa22.31■■□□□ 1.16
LIMD2-211ENST00000583211 GGA3Q9NZ52 723 aa22.31■■□□□ 1.16
LIMD2-211ENST00000583211 DOCK2Q92608 1830 aa22.3■■□□□ 1.16
LIMD2-211ENST00000583211 SPDYE2BA6NHP3 402 aa22.3■■□□□ 1.16
LIMD2-211ENST00000583211 LDHBP07195 334 aaKnown RBP22.3■■□□□ 1.16
LIMD2-211ENST00000583211 SPDYE6P0CI01 402 aa22.3■■□□□ 1.16
LIMD2-211ENST00000583211 TEKT1Q969V4 418 aa22.3■■□□□ 1.16
LIMD2-211ENST00000583211 MYO1BO43795 1136 aa22.29■■□□□ 1.16
LIMD2-211ENST00000583211 CRKP46108 304 aa22.29■■□□□ 1.16
LIMD2-211ENST00000583211 APLP1P51693 650 aa22.29■■□□□ 1.16
LIMD2-211ENST00000583211 RBM5P52756 815 aaKnown RBP eCLIP22.29■■□□□ 1.16
LIMD2-211ENST00000583211 ANGEL2Q5VTE6 544 aaKnown RBP22.29■■□□□ 1.16
LIMD2-211ENST00000583211 SPTY2D1Q68D10 685 aaPredicted RBP22.29■■□□□ 1.16
LIMD2-211ENST00000583211 PRDX5P30044 214 aa22.28■■□□□ 1.16
LIMD2-211ENST00000583211 HHIPL2Q6UWX4 724 aa22.28■■□□□ 1.16
LIMD2-211ENST00000583211 KRT26Q7Z3Y9 468 aa22.28■■□□□ 1.16
LIMD2-211ENST00000583211 SULF1Q8IWU6 871 aa22.28■■□□□ 1.16
LIMD2-211ENST00000583211 GCC1Q96CN9 775 aa22.28■■□□□ 1.16
LIMD2-211ENST00000583211 PRMT6Q96LA8 375 aaPredicted RBP22.28■■□□□ 1.16
LIMD2-211ENST00000583211 RWDD1Q9H446 243 aaPredicted RBP22.28■■□□□ 1.16
LIMD2-211ENST00000583211 ASTN2O75129 1339 aaPredicted RBP22.28■■□□□ 1.16
LIMD2-211ENST00000583211 IRX6P78412 446 aaPredicted RBP22.27■■□□□ 1.16
LIMD2-211ENST00000583211 PI16Q6UXB8 463 aa22.27■■□□□ 1.16
LIMD2-211ENST00000583211 ZDHHC15Q96MV8 337 aa22.27■■□□□ 1.16
LIMD2-211ENST00000583211 GLIS2Q9BZE0 524 aaPredicted RBP22.27■■□□□ 1.16
LIMD2-211ENST00000583211 ABCF2Q9UG63 623 aa22.27■■□□□ 1.16
LIMD2-211ENST00000583211 IGSF3O75054 1194 aa22.26■■□□□ 1.15
LIMD2-211ENST00000583211 APOBEC3FQ8IUX4 373 aaKnown RBP22.26■■□□□ 1.15
LIMD2-211ENST00000583211 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.26■■□□□ 1.15
LIMD2-211ENST00000583211 SMARCA5O60264 1052 aaPredicted RBP22.25■■□□□ 1.15
LIMD2-211ENST00000583211 ERICH6Q7L0X2 663 aa22.25■■□□□ 1.15
LIMD2-211ENST00000583211 USP48Q86UV5 1035 aa22.25■■□□□ 1.15
LIMD2-211ENST00000583211 PCDHAC2Q9Y5I4 1007 aa22.25■■□□□ 1.15
LIMD2-211ENST00000583211 MYH7P12883 1935 aa22.24■■□□□ 1.15
LIMD2-211ENST00000583211 TRAF5O00463 557 aa22.24■■□□□ 1.15
LIMD2-211ENST00000583211 DZIP1Q86YF9 867 aaKnown RBP22.24■■□□□ 1.15
LIMD2-211ENST00000583211 SLF2Q8IX21 1173 aa22.24■■□□□ 1.15
LIMD2-211ENST00000583211 ADM5C9JUS6 153 aa22.23■■□□□ 1.15
LIMD2-211ENST00000583211 SPDYE2Q495Y8 402 aa22.23■■□□□ 1.15
LIMD2-211ENST00000583211 BCL11AQ9H165 835 aa22.23■■□□□ 1.15
LIMD2-211ENST00000583211 SNRKQ9NRH2 765 aa22.23■■□□□ 1.15
LIMD2-211ENST00000583211 CYP2E1P05181 493 aaPredicted RBP22.22■■□□□ 1.15
LIMD2-211ENST00000583211 ZAP70P43403 619 aa22.22■■□□□ 1.15
LIMD2-211ENST00000583211 DIXDC1Q155Q3 683 aa22.22■■□□□ 1.15
LIMD2-211ENST00000583211 APOBEC3HQ6NTF7 200 aaKnown RBP22.22■■□□□ 1.15
LIMD2-211ENST00000583211 TBC1D9Q6ZT07 1266 aa22.22■■□□□ 1.15
LIMD2-211ENST00000583211 CREBZFQ9NS37 354 aa22.22■■□□□ 1.15
LIMD2-211ENST00000583211 LRP2BPQ9P2M1 347 aa22.22■■□□□ 1.15
LIMD2-211ENST00000583211 ZBTB47Q9UFB7 747 aaPredicted RBP22.22■■□□□ 1.15
LIMD2-211ENST00000583211 DAGLAQ9Y4D2 1042 aa22.22■■□□□ 1.15
LIMD2-211ENST00000583211 TMEM88BA6NKF7 163 aa22.21■■□□□ 1.15
LIMD2-211ENST00000583211 ATP5JP18859 108 aa22.21■■□□□ 1.15
LIMD2-211ENST00000583211 GSTO1P78417 241 aa22.21■■□□□ 1.15
LIMD2-211ENST00000583211 MECOMQ03112 1051 aa22.21■■□□□ 1.15
LIMD2-211ENST00000583211 SMC5Q8IY18 1101 aa22.21■■□□□ 1.15
LIMD2-211ENST00000583211 FAM163AQ96GL9 167 aaPredicted RBP22.21■■□□□ 1.15
LIMD2-211ENST00000583211 GPATCH3Q96I76 525 aa22.21■■□□□ 1.15
LIMD2-211ENST00000583211 RAI14Q9P0K7 980 aa22.21■■□□□ 1.15
LIMD2-211ENST00000583211 PPP2R3BQ9Y5P8 575 aa22.21■■□□□ 1.15
LIMD2-211ENST00000583211 GAKO14976 1311 aa22.21■■□□□ 1.15
LIMD2-211ENST00000583211 CLRN2A0PK11 232 aa22.2■■□□□ 1.14
LIMD2-211ENST00000583211 CENPBP07199 599 aaPredicted RBP22.2■■□□□ 1.14
LIMD2-211ENST00000583211 TNFAIP1Q13829 316 aa22.2■■□□□ 1.14
LIMD2-211ENST00000583211 NSUN4Q96CB9 384 aaKnown RBP22.2■■□□□ 1.14
LIMD2-211ENST00000583211 TDRD3Q9H7E2 651 aaKnown RBP22.2■■□□□ 1.14
LIMD2-211ENST00000583211 ZNF70Q9UC06 446 aaPredicted RBP22.2■■□□□ 1.14
LIMD2-211ENST00000583211 AOX1Q06278 1338 aa22.2■■□□□ 1.14
LIMD2-211ENST00000583211 IGHDP01880 384 aa22.19■■□□□ 1.14
LIMD2-211ENST00000583211 FMR1Q06787 632 aaKnown RBP eCLIP22.19■■□□□ 1.14
LIMD2-211ENST00000583211 TTF1Q15361 905 aaPredicted RBP22.19■■□□□ 1.14
LIMD2-211ENST00000583211 TMED8Q6PL24 325 aaPredicted RBP22.19■■□□□ 1.14
LIMD2-211ENST00000583211 CDCA5Q96FF9 252 aa22.19■■□□□ 1.14
LIMD2-211ENST00000583211 VEZTQ9HBM0 779 aa22.19■■□□□ 1.14
LIMD2-211ENST00000583211 ECHDC1Q9NTX5 307 aa22.19■■□□□ 1.14
LIMD2-211ENST00000583211 CDK5RAP2Q96SN8 1893 aa22.18■■□□□ 1.14
LIMD2-211ENST00000583211 PAPPA2Q9BXP8 1791 aa22.18■■□□□ 1.14
LIMD2-211ENST00000583211 MROH7-TTC4A0A0A0MT08 1334 aa22.18■■□□□ 1.14
LIMD2-211ENST00000583211 CELF2O95319 508 aaKnown RBP22.18■■□□□ 1.14
LIMD2-211ENST00000583211 LDHCP07864 332 aa22.18■■□□□ 1.14
LIMD2-211ENST00000583211 ANKRD45Q5TZF3 282 aa22.18■■□□□ 1.14
LIMD2-211ENST00000583211 FKBP1CQ5VVH2 108 aa22.18■■□□□ 1.14
LIMD2-211ENST00000583211 CST9Q5W186 159 aa22.18■■□□□ 1.14
LIMD2-211ENST00000583211 DEFB129Q9H1M3 183 aa22.18■■□□□ 1.14
LIMD2-211ENST00000583211 TMOD2Q9NZR1 351 aa22.18■■□□□ 1.14
LIMD2-211ENST00000583211 FOCADQ5VW36 1801 aa22.17■■□□□ 1.14
LIMD2-211ENST00000583211 TTC41PQ6P2S7 1318 aa22.17■■□□□ 1.14
LIMD2-211ENST00000583211 TNNI2P48788 182 aa22.17■■□□□ 1.14
LIMD2-211ENST00000583211 ZNF384Q8TF68 577 aa22.17■■□□□ 1.14
LIMD2-211ENST00000583211 PIH1D3Q9NQM4 214 aaKnown RBP22.17■■□□□ 1.14
LIMD2-211ENST00000583211 SCAF8Q9UPN6 1271 aaKnown RBP22.17■■□□□ 1.14
LIMD2-211ENST00000583211 AK9Q5TCS8 1911 aa22.17■■□□□ 1.14
LIMD2-211ENST00000583211 DLK2Q6UY11 383 aa22.16■■□□□ 1.14
LIMD2-211ENST00000583211 HAUS7Q99871 368 aa22.16■■□□□ 1.14
LIMD2-211ENST00000583211 ZNF408Q9H9D4 720 aa22.16■■□□□ 1.14
LIMD2-211ENST00000583211 NDUFB9Q9Y6M9 179 aa22.16■■□□□ 1.14
LIMD2-211ENST00000583211 GPR75-ASB3A0A0A6YYF3 556 aa22.15■■□□□ 1.14
LIMD2-211ENST00000583211 MAP3K12Q12852 859 aa22.15■■□□□ 1.14
LIMD2-211ENST00000583211 NAA16Q6N069 864 aaPredicted RBP22.15■■□□□ 1.14
LIMD2-211ENST00000583211 CDC42EP5Q6NZY7 148 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms