RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 AIDAQ96BJ3 306 aa17.38■□□□□ 0.37
MKS1-211ENST00000581761 COL11A2P13942 1736 aaPredicted RBP17.38■□□□□ 0.37
MKS1-211ENST00000581761 COL1A1P02452 1464 aaPredicted RBP17.37■□□□□ 0.37
MKS1-211ENST00000581761 E7EWF7 191 aa17.37■□□□□ 0.37
MKS1-211ENST00000581761 SEMA3EO15041 775 aa17.37■□□□□ 0.37
MKS1-211ENST00000581761 HMGB1P09429 215 aaKnown RBP17.37■□□□□ 0.37
MKS1-211ENST00000581761 HIBADHP31937 336 aaKnown RBP17.37■□□□□ 0.37
MKS1-211ENST00000581761 DALRD3Q5D0E6 543 aaKnown RBP17.37■□□□□ 0.37
MKS1-211ENST00000581761 RAI14Q9P0K7 980 aa17.37■□□□□ 0.37
MKS1-211ENST00000581761 ANKIB1Q9P2G1 1089 aa17.37■□□□□ 0.37
MKS1-211ENST00000581761 LEMD3Q9Y2U8 911 aa17.37■□□□□ 0.37
MKS1-211ENST00000581761 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.37■□□□□ 0.37
MKS1-211ENST00000581761 MBD4O95243 580 aa17.36■□□□□ 0.37
MKS1-211ENST00000581761 FGAP02671 866 aa17.36■□□□□ 0.37
MKS1-211ENST00000581761 TOB2Q14106 344 aaPredicted RBP17.36■□□□□ 0.37
MKS1-211ENST00000581761 CCDC83Q8IWF9 413 aa17.36■□□□□ 0.37
MKS1-211ENST00000581761 ZNF622Q969S3 477 aaKnown RBP eCLIP17.36■□□□□ 0.378e-7■■■□□ 15.6
MKS1-211ENST00000581761 ABCF2Q9UG63 623 aa17.36■□□□□ 0.37
MKS1-211ENST00000581761 TPCN1Q9ULQ1 816 aa17.36■□□□□ 0.37
MKS1-211ENST00000581761 XDHP47989 1333 aa17.36■□□□□ 0.37
MKS1-211ENST00000581761 DDX11L8A8MPP1 907 aa17.35■□□□□ 0.37
MKS1-211ENST00000581761 APPP05067 770 aa17.35■□□□□ 0.37
MKS1-211ENST00000581761 HAND2P61296 217 aa17.35■□□□□ 0.37
MKS1-211ENST00000581761 ME3Q16798 604 aa17.35■□□□□ 0.37
MKS1-211ENST00000581761 Q6ZUG5 572 aa17.35■□□□□ 0.37
MKS1-211ENST00000581761 DHX32Q7L7V1 743 aaKnown RBP17.35■□□□□ 0.37
MKS1-211ENST00000581761 STRBPQ96SI9 672 aaKnown RBP17.35■□□□□ 0.37
MKS1-211ENST00000581761 ARMT1Q9H993 441 aa17.35■□□□□ 0.37
MKS1-211ENST00000581761 SMC3Q9UQE7 1217 aa17.35■□□□□ 0.37
MKS1-211ENST00000581761 CYP7A1P22680 504 aa17.34■□□□□ 0.37
MKS1-211ENST00000581761 HOXA10P31260 410 aaPredicted RBP17.34■□□□□ 0.37
MKS1-211ENST00000581761 FGD1P98174 961 aa17.34■□□□□ 0.37
MKS1-211ENST00000581761 CHAF1AQ13111 956 aaPredicted RBP17.34■□□□□ 0.37
MKS1-211ENST00000581761 PKP1Q13835 747 aa17.34■□□□□ 0.37
MKS1-211ENST00000581761 PDS5AQ29RF7 1337 aaKnown RBP17.34■□□□□ 0.37
MKS1-211ENST00000581761 STYK1Q6J9G0 422 aa17.34■□□□□ 0.37
MKS1-211ENST00000581761 TTLL6Q8N841 843 aa17.34■□□□□ 0.37
MKS1-211ENST00000581761 MASTLQ96GX5 879 aa17.34■□□□□ 0.37
MKS1-211ENST00000581761 CRAMP1Q96RY5 1269 aa17.34■□□□□ 0.37
MKS1-211ENST00000581761 DLEC1Q9Y238 1755 aa17.34■□□□□ 0.37
MKS1-211ENST00000581761 IRS2Q9Y4H2 1338 aa17.33■□□□□ 0.36
MKS1-211ENST00000581761 ZNF213O14771 459 aa17.33■□□□□ 0.36
MKS1-211ENST00000581761 BBOX1O75936 387 aa17.33■□□□□ 0.36
MKS1-211ENST00000581761 NPR1P16066 1061 aa17.33■□□□□ 0.36
MKS1-211ENST00000581761 ATP2B4P23634 1241 aa17.33■□□□□ 0.36
MKS1-211ENST00000581761 GPSM2P81274 684 aa17.33■□□□□ 0.36
MKS1-211ENST00000581761 ARHGAP27Q6ZUM4 889 aa17.33■□□□□ 0.36
MKS1-211ENST00000581761 SLC51AQ86UW1 340 aa17.33■□□□□ 0.36
MKS1-211ENST00000581761 NECAB1Q8N987 351 aa17.33■□□□□ 0.36
MKS1-211ENST00000581761 ZDHHC9Q9Y397 364 aa17.33■□□□□ 0.36
MKS1-211ENST00000581761 LAMA4Q16363 1823 aa17.33■□□□□ 0.36
MKS1-211ENST00000581761 PATL2C9JE40 543 aaKnown RBP17.32■□□□□ 0.36
MKS1-211ENST00000581761 BRD1O95696 1058 aa17.32■□□□□ 0.36
MKS1-211ENST00000581761 GNAT2P19087 354 aa17.32■□□□□ 0.36
MKS1-211ENST00000581761 PTMSP20962 102 aa17.32■□□□□ 0.36
MKS1-211ENST00000581761 EXOSC10Q01780 885 aaKnown RBP17.32■□□□□ 0.36
MKS1-211ENST00000581761 ST3GAL1Q11201 340 aa17.32■□□□□ 0.36
MKS1-211ENST00000581761 ALX1Q15699 326 aa17.32■□□□□ 0.36
MKS1-211ENST00000581761 LCORLQ8N3X6 602 aa17.32■□□□□ 0.36
MKS1-211ENST00000581761 LRRC2Q9BYS8 371 aa17.32■□□□□ 0.36
MKS1-211ENST00000581761 ZMYM6O95789 1325 aa17.31■□□□□ 0.36
MKS1-211ENST00000581761 ZBTB22O15209 634 aa17.31■□□□□ 0.36
MKS1-211ENST00000581761 UFL1O94874 794 aa17.31■□□□□ 0.36
MKS1-211ENST00000581761 BAG4O95429 457 aaKnown RBP17.31■□□□□ 0.36
MKS1-211ENST00000581761 CLEC17AQ6ZS10 378 aa17.31■□□□□ 0.36
MKS1-211ENST00000581761 C15orf52Q6ZUT6 534 aaKnown RBP17.31■□□□□ 0.36
MKS1-211ENST00000581761 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
MKS1-211ENST00000581761 ZNF804AQ7Z570 1209 aa17.31■□□□□ 0.36
MKS1-211ENST00000581761 TXNRD3Q86VQ6 643 aa17.31■□□□□ 0.36
MKS1-211ENST00000581761 MIGA1Q8NAN2 632 aa17.31■□□□□ 0.36
MKS1-211ENST00000581761 C7orf43Q8WVR3 580 aa17.31■□□□□ 0.36
MKS1-211ENST00000581761 GGA1Q9UJY5 639 aa17.31■□□□□ 0.36
MKS1-211ENST00000581761 SLC4A4Q9Y6R1 1079 aa17.31■□□□□ 0.36
MKS1-211ENST00000581761 MYH13Q9UKX3 1938 aa17.31■□□□□ 0.36
MKS1-211ENST00000581761 MAGEB6P1A0A0J9YX57 407 aa17.3■□□□□ 0.36
MKS1-211ENST00000581761 GOLGA6L22H0YM25 854 aa17.3■□□□□ 0.36
MKS1-211ENST00000581761 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
MKS1-211ENST00000581761 GJB2P29033 226 aa17.3■□□□□ 0.36
MKS1-211ENST00000581761 STK3Q13188 491 aa17.3■□□□□ 0.36
MKS1-211ENST00000581761 FOXD4L5Q5VV16 416 aaPredicted RBP17.3■□□□□ 0.36
MKS1-211ENST00000581761 NAA16Q6N069 864 aaPredicted RBP17.3■□□□□ 0.36
MKS1-211ENST00000581761 RALYLQ86SE5 291 aaKnown RBP17.3■□□□□ 0.36
MKS1-211ENST00000581761 IFNL3Q8IZI9 196 aa17.3■□□□□ 0.36
MKS1-211ENST00000581761 NCOA7Q8NI08 942 aa17.3■□□□□ 0.36
MKS1-211ENST00000581761 FOXD4L4Q8WXT5 416 aaPredicted RBP17.3■□□□□ 0.36
MKS1-211ENST00000581761 BRF1Q92994 677 aa17.3■□□□□ 0.36
MKS1-211ENST00000581761 CNKSR1Q969H4 720 aa17.3■□□□□ 0.36
MKS1-211ENST00000581761 GPR101Q96P66 508 aaPredicted RBP17.3■□□□□ 0.36
MKS1-211ENST00000581761 NAPBQ9H115 298 aa17.3■□□□□ 0.36
MKS1-211ENST00000581761 EPB41L4AQ9HCS5 686 aaPredicted RBP17.3■□□□□ 0.36
MKS1-211ENST00000581761 ZNF219Q9P2Y4 722 aaPredicted RBP17.3■□□□□ 0.36
MKS1-211ENST00000581761 NSFL1CQ9UNZ2 370 aaKnown RBP17.3■□□□□ 0.36
MKS1-211ENST00000581761 SLX4Q8IY92 1834 aa17.29■□□□□ 0.36
MKS1-211ENST00000581761 C21orf2O43822 256 aa17.29■□□□□ 0.36
MKS1-211ENST00000581761 OLFM4Q6UX06 510 aa17.29■□□□□ 0.36
MKS1-211ENST00000581761 MB21D2Q8IYB1 491 aaPredicted RBP17.29■□□□□ 0.36
MKS1-211ENST00000581761 NACAP1Q9BZK3 213 aa17.29■□□□□ 0.36
MKS1-211ENST00000581761 WDR33Q9C0J8 1336 aaKnown RBP17.28■□□□□ 0.36
MKS1-211ENST00000581761 GSG1L2A8MUP6 293 aa17.28■□□□□ 0.36
MKS1-211ENST00000581761 PRKAB2O43741 272 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms