RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 C16orf71Q8IYS4 520 aaPredicted RBP12.68□□□□□ -0.38
CCDC47-203ENST00000580986 SPATA5Q8NB90 893 aa12.68□□□□□ -0.38
CCDC47-203ENST00000580986 HAUS7Q99871 368 aa12.68□□□□□ -0.38
CCDC47-203ENST00000580986 SCUBE2Q9NQ36 999 aa12.68□□□□□ -0.38
CCDC47-203ENST00000580986 RNF181Q9P0P0 153 aa12.68□□□□□ -0.38
CCDC47-203ENST00000580986 HMG20BQ9P0W2 317 aa12.68□□□□□ -0.38
CCDC47-203ENST00000580986 MAST2Q6P0Q8 1798 aa12.68□□□□□ -0.38
CCDC47-203ENST00000580986 FRAT2O75474 233 aaPredicted RBP12.67□□□□□ -0.38
CCDC47-203ENST00000580986 RPS12P25398 132 aaKnown RBP12.67□□□□□ -0.38
CCDC47-203ENST00000580986 EIF6P56537 245 aaKnown RBP12.67□□□□□ -0.38
CCDC47-203ENST00000580986 TNIP1Q15025 636 aa12.67□□□□□ -0.38
CCDC47-203ENST00000580986 TTF1Q15361 905 aaPredicted RBP12.67□□□□□ -0.38
CCDC47-203ENST00000580986 DACT2Q5SW24 774 aa12.67□□□□□ -0.38
CCDC47-203ENST00000580986 TTLL5Q6EMB2 1281 aa12.67□□□□□ -0.38
CCDC47-203ENST00000580986 OTUD7AQ8TE49 926 aaPredicted RBP12.67□□□□□ -0.38
CCDC47-203ENST00000580986 RFX7Q2KHR2 1363 aa12.67□□□□□ -0.38
CCDC47-203ENST00000580986 CXCL9Q07325 125 aa12.66□□□□□ -0.38
CCDC47-203ENST00000580986 SCARF1Q14162 830 aa12.66□□□□□ -0.38
CCDC47-203ENST00000580986 CIAPIN1Q6FI81 312 aa12.66□□□□□ -0.38
CCDC47-203ENST00000580986 GPC2Q8N158 579 aa12.66□□□□□ -0.38
CCDC47-203ENST00000580986 AGBL3Q8NEM8 1001 aa12.66□□□□□ -0.38
CCDC47-203ENST00000580986 MAST3O60307 1309 aa12.65□□□□□ -0.38
CCDC47-203ENST00000580986 GTF2IP78347 998 aa12.65□□□□□ -0.38
CCDC47-203ENST00000580986 SPTY2D1Q68D10 685 aaPredicted RBP12.65□□□□□ -0.38
CCDC47-203ENST00000580986 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
CCDC47-203ENST00000580986 DPF2Q92785 391 aa12.65□□□□□ -0.38
CCDC47-203ENST00000580986 GMLQ99445 158 aa12.65□□□□□ -0.38
CCDC47-203ENST00000580986 MRIQ9BWK5 157 aa12.65□□□□□ -0.38
CCDC47-203ENST00000580986 PSMD14O00487 310 aa12.64□□□□□ -0.39
CCDC47-203ENST00000580986 CYP2E1P05181 493 aaPredicted RBP12.64□□□□□ -0.39
CCDC47-203ENST00000580986 ZAP70P43403 619 aa12.64□□□□□ -0.39
CCDC47-203ENST00000580986 HDLBPQ00341 1268 aaKnown RBP12.64□□□□□ -0.39
CCDC47-203ENST00000580986 MFSD14BQ5SR56 506 aa12.64□□□□□ -0.39
CCDC47-203ENST00000580986 TTC22Q5TAA0 569 aa12.64□□□□□ -0.39
CCDC47-203ENST00000580986 DPY19L2Q6NUT2 758 aa12.64□□□□□ -0.39
CCDC47-203ENST00000580986 L3MBTL3Q96JM7 780 aaPredicted RBP12.64□□□□□ -0.39
CCDC47-203ENST00000580986 BOLA2Q9H3K6 86 aa12.64□□□□□ -0.39
CCDC47-203ENST00000580986 PAG1Q9NWQ8 432 aa12.64□□□□□ -0.39
CCDC47-203ENST00000580986 WDR90Q96KV7 1748 aa12.64□□□□□ -0.39
CCDC47-203ENST00000580986 MYH7P12883 1935 aa12.64□□□□□ -0.39
CCDC47-203ENST00000580986 ZNF541Q9H0D2 1346 aa12.63□□□□□ -0.39
CCDC47-203ENST00000580986 SCN4AP35499 1836 aa12.63□□□□□ -0.39
CCDC47-203ENST00000580986 AK9Q5TCS8 1911 aa12.63□□□□□ -0.39
CCDC47-203ENST00000580986 GLTPD2A6NH11 291 aa12.63□□□□□ -0.39
CCDC47-203ENST00000580986 RAD17O75943 681 aa12.63□□□□□ -0.39
CCDC47-203ENST00000580986 LRRFIP1Q32MZ4 808 aaKnown RBP12.63□□□□□ -0.39
CCDC47-203ENST00000580986 BMP2KLQ5H9B9 411 aa12.63□□□□□ -0.39
CCDC47-203ENST00000580986 PI16Q6UXB8 463 aa12.63□□□□□ -0.39
CCDC47-203ENST00000580986 KBTBD3Q8NAB2 608 aa12.63□□□□□ -0.39
CCDC47-203ENST00000580986 EVI5LQ96CN4 794 aa12.63□□□□□ -0.39
CCDC47-203ENST00000580986 IQSEC3Q9UPP2 1182 aaPredicted RBP12.63□□□□□ -0.39
CCDC47-203ENST00000580986 POTEFA5A3E0 1075 aa12.62□□□□□ -0.39
CCDC47-203ENST00000580986 CHAF1AQ13111 956 aaPredicted RBP12.62□□□□□ -0.39
CCDC47-203ENST00000580986 TSHZ3Q63HK5 1081 aa12.62□□□□□ -0.39
CCDC47-203ENST00000580986 CNTROBQ8N137 903 aa12.62□□□□□ -0.39
CCDC47-203ENST00000580986 CERS5Q8N5B7 392 aa12.62□□□□□ -0.39
CCDC47-203ENST00000580986 KCNQ5Q9NR82 932 aa12.62□□□□□ -0.39
CCDC47-203ENST00000580986 TTLL13PA6NNM8 815 aa12.61□□□□□ -0.39
CCDC47-203ENST00000580986 GOLIM4O00461 696 aa12.61□□□□□ -0.39
CCDC47-203ENST00000580986 LDHBP07195 334 aaKnown RBP12.61□□□□□ -0.39
CCDC47-203ENST00000580986 ZFYP08048 801 aaPredicted RBP12.61□□□□□ -0.39
CCDC47-203ENST00000580986 GSPT1P15170 499 aaKnown RBP12.61□□□□□ -0.39
CCDC47-203ENST00000580986 ZNF280AP59817 542 aaPredicted RBP12.61□□□□□ -0.39
CCDC47-203ENST00000580986 MAP3K12Q12852 859 aa12.61□□□□□ -0.39
CCDC47-203ENST00000580986 ZSCAN25Q6NSZ9 544 aa12.61□□□□□ -0.39
CCDC47-203ENST00000580986 ERICH6Q7L0X2 663 aa12.61□□□□□ -0.39
CCDC47-203ENST00000580986 CERS3Q8IU89 383 aa12.61□□□□□ -0.39
CCDC47-203ENST00000580986 SLF2Q8IX21 1173 aa12.61□□□□□ -0.39
CCDC47-203ENST00000580986 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
CCDC47-203ENST00000580986 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
CCDC47-203ENST00000580986 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC47-203ENST00000580986 SERPINA10Q9UK55 444 aa12.61□□□□□ -0.39
CCDC47-203ENST00000580986 MYO5AQ9Y4I1 1855 aaKnown RBP12.61□□□□□ -0.39
CCDC47-203ENST00000580986 SEC24BO95487 1268 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 PRDX5P30044 214 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 GSTO1P78417 241 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 HHIPL2Q6UWX4 724 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 OGFOD1Q8N543 542 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 MTMR14Q8NCE2 650 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 NSUN4Q96CB9 384 aaKnown RBP12.6□□□□□ -0.39
CCDC47-203ENST00000580986 BCL11AQ9H165 835 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 ANTXR1Q9H6X2 564 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 PIH1D3Q9NQM4 214 aaKnown RBP12.6□□□□□ -0.39
CCDC47-203ENST00000580986 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 LRP2BPQ9P2M1 347 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 ABCF2Q9UG63 623 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 HDAC9Q9UKV0 1011 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 PCDHB13Q9Y5F0 798 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 ECM29Q5VYK3 1845 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 GAKO14976 1311 aa12.6□□□□□ -0.39
CCDC47-203ENST00000580986 HIP1O00291 1037 aa12.59□□□□□ -0.39
CCDC47-203ENST00000580986 MAP4K4O95819 1239 aaPredicted RBP12.59□□□□□ -0.39
CCDC47-203ENST00000580986 USP17L8P0C7I0 530 aa12.59□□□□□ -0.39
CCDC47-203ENST00000580986 SCNN1DP51172 638 aa12.59□□□□□ -0.39
CCDC47-203ENST00000580986 UBE3CQ15386 1083 aa12.59□□□□□ -0.39
CCDC47-203ENST00000580986 DZIP1Q86YF9 867 aaKnown RBP12.59□□□□□ -0.39
CCDC47-203ENST00000580986 GPRC5DQ9NZD1 345 aa12.59□□□□□ -0.39
CCDC47-203ENST00000580986 MYH2Q9UKX2 1941 aa12.58□□□□□ -0.39
CCDC47-203ENST00000580986 IQCA1LA6NCM1 817 aa12.58□□□□□ -0.4
CCDC47-203ENST00000580986 IDH1O75874 414 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms