RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 PPP2R3BQ9Y5P8 575 aa13.2□□□□□ -0.3
SUPT4H1-204ENST00000580947 PNMA6EA0A0J9YXQ4 647 aa13.19□□□□□ -0.3
SUPT4H1-204ENST00000580947 SRGAP3O43295 1099 aa13.19□□□□□ -0.3
SUPT4H1-204ENST00000580947 CA12O43570 354 aa13.19□□□□□ -0.3
SUPT4H1-204ENST00000580947 CRKP46108 304 aa13.19□□□□□ -0.3
SUPT4H1-204ENST00000580947 CHAF1AQ13111 956 aaPredicted RBP13.19□□□□□ -0.3
SUPT4H1-204ENST00000580947 MAP3K11Q16584 847 aa13.19□□□□□ -0.3
SUPT4H1-204ENST00000580947 DZIP1LQ8IYY4 767 aaKnown RBP13.19□□□□□ -0.3
SUPT4H1-204ENST00000580947 CSRNP1Q96S65 589 aa13.19□□□□□ -0.3
SUPT4H1-204ENST00000580947 CEP126Q9P2H0 1117 aa13.19□□□□□ -0.3
SUPT4H1-204ENST00000580947 ZNF70Q9UC06 446 aaPredicted RBP13.19□□□□□ -0.3
SUPT4H1-204ENST00000580947 FZD1Q9UP38 647 aa13.19□□□□□ -0.3
SUPT4H1-204ENST00000580947 CDK5RAP2Q96SN8 1893 aa13.19□□□□□ -0.3
SUPT4H1-204ENST00000580947 GNAI2P04899 355 aa13.18□□□□□ -0.3
SUPT4H1-204ENST00000580947 ADORA1P30542 326 aa13.18□□□□□ -0.3
SUPT4H1-204ENST00000580947 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
SUPT4H1-204ENST00000580947 TEPSINQ96N21 525 aa13.18□□□□□ -0.3
SUPT4H1-204ENST00000580947 BEGAINQ9BUH8 593 aa13.18□□□□□ -0.3
SUPT4H1-204ENST00000580947 MRIQ9BWK5 157 aa13.18□□□□□ -0.3
SUPT4H1-204ENST00000580947 TDRD3Q9H7E2 651 aaKnown RBP13.18□□□□□ -0.3
SUPT4H1-204ENST00000580947 SUGT1Q9Y2Z0 365 aa13.18□□□□□ -0.3
SUPT4H1-204ENST00000580947 HTTP42858 3142 aa13.18□□□□□ -0.3
SUPT4H1-204ENST00000580947 DOCK2Q92608 1830 aa13.18□□□□□ -0.3
SUPT4H1-204ENST00000580947 MYO1BO43795 1136 aa13.17□□□□□ -0.3
SUPT4H1-204ENST00000580947 PHKA1P46020 1223 aa13.17□□□□□ -0.3
SUPT4H1-204ENST00000580947 RBM5P52756 815 aaKnown RBP eCLIP13.17□□□□□ -0.3
SUPT4H1-204ENST00000580947 RASA3Q14644 834 aa13.17□□□□□ -0.3
SUPT4H1-204ENST00000580947 NBPF12Q5TAG4 269 aaPredicted RBP13.17□□□□□ -0.3
SUPT4H1-204ENST00000580947 APOBEC3HQ6NTF7 200 aaKnown RBP13.17□□□□□ -0.3
SUPT4H1-204ENST00000580947 ZDHHC15Q96MV8 337 aa13.17□□□□□ -0.3
SUPT4H1-204ENST00000580947 VEZTQ9HBM0 779 aa13.17□□□□□ -0.3
SUPT4H1-204ENST00000580947 SAGE1Q9NXZ1 904 aa13.17□□□□□ -0.3
SUPT4H1-204ENST00000580947 SALL1Q9NSC2 1324 aa13.16□□□□□ -0.3
SUPT4H1-204ENST00000580947 NF2P35240 595 aa13.16□□□□□ -0.3
SUPT4H1-204ENST00000580947 TFCP2Q12800 502 aa13.16□□□□□ -0.3
SUPT4H1-204ENST00000580947 POLA2Q14181 598 aa13.16□□□□□ -0.3
SUPT4H1-204ENST00000580947 WDR66Q8TBY9 1149 aa13.16□□□□□ -0.3
SUPT4H1-204ENST00000580947 RNF186Q9NXI6 227 aa13.16□□□□□ -0.3
SUPT4H1-204ENST00000580947 ANGEL1Q9UNK9 670 aaKnown RBP13.16□□□□□ -0.3
SUPT4H1-204ENST00000580947 MAST2Q6P0Q8 1798 aa13.16□□□□□ -0.3
SUPT4H1-204ENST00000580947 FOCADQ5VW36 1801 aa13.16□□□□□ -0.3
SUPT4H1-204ENST00000580947 A0A1B0GUL7 405 aa13.15□□□□□ -0.3
SUPT4H1-204ENST00000580947 SEMA3EO15041 775 aa13.15□□□□□ -0.3
SUPT4H1-204ENST00000580947 ZBTB7BO15156 539 aaPredicted RBP13.15□□□□□ -0.3
SUPT4H1-204ENST00000580947 FRAT2O75474 233 aaPredicted RBP13.15□□□□□ -0.3
SUPT4H1-204ENST00000580947 TIMM10P62072 90 aa13.15□□□□□ -0.3
SUPT4H1-204ENST00000580947 PRKG1Q13976 671 aa13.15□□□□□ -0.3
SUPT4H1-204ENST00000580947 TTLL12Q14166 644 aaPredicted RBP13.15□□□□□ -0.3
SUPT4H1-204ENST00000580947 CCDC102BQ68D86 513 aa13.15□□□□□ -0.3
SUPT4H1-204ENST00000580947 HHIPL2Q6UWX4 724 aa13.15□□□□□ -0.3
SUPT4H1-204ENST00000580947 ARMC9Q7Z3E5 817 aa13.15□□□□□ -0.3
SUPT4H1-204ENST00000580947 SSH3Q8TE77 659 aa13.15□□□□□ -0.3
SUPT4H1-204ENST00000580947 TEKT1Q969V4 418 aa13.15□□□□□ -0.3
SUPT4H1-204ENST00000580947 CLMNQ96JQ2 1002 aa13.15□□□□□ -0.3
SUPT4H1-204ENST00000580947 MAST3O60307 1309 aa13.14□□□□□ -0.31
SUPT4H1-204ENST00000580947 PDS5AQ29RF7 1337 aaKnown RBP13.14□□□□□ -0.31
SUPT4H1-204ENST00000580947 UNCXA6NJT0 531 aa13.14□□□□□ -0.31
SUPT4H1-204ENST00000580947 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
SUPT4H1-204ENST00000580947 USP2O75604 605 aaPredicted RBP13.14□□□□□ -0.31
SUPT4H1-204ENST00000580947 PRDX5P30044 214 aa13.14□□□□□ -0.31
SUPT4H1-204ENST00000580947 TNFAIP1Q13829 316 aa13.14□□□□□ -0.31
SUPT4H1-204ENST00000580947 RASGRF1Q13972 1273 aa13.14□□□□□ -0.31
SUPT4H1-204ENST00000580947 SUPT20HL1Q3ZLR7 823 aa13.14□□□□□ -0.31
SUPT4H1-204ENST00000580947 FKBP1CQ5VVH2 108 aa13.14□□□□□ -0.31
SUPT4H1-204ENST00000580947 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
SUPT4H1-204ENST00000580947 TMEM39BQ9GZU3 492 aa13.14□□□□□ -0.31
SUPT4H1-204ENST00000580947 PTPRFP10586 1907 aa13.13□□□□□ -0.31
SUPT4H1-204ENST00000580947 RFX7Q2KHR2 1363 aa13.13□□□□□ -0.31
SUPT4H1-204ENST00000580947 RPAP1Q9BWH6 1393 aaPredicted RBP13.13□□□□□ -0.31
SUPT4H1-204ENST00000580947 TM4SF4P48230 202 aa13.13□□□□□ -0.31
SUPT4H1-204ENST00000580947 CACNB3P54284 484 aa13.13□□□□□ -0.31
SUPT4H1-204ENST00000580947 DIXDC1Q155Q3 683 aa13.13□□□□□ -0.31
SUPT4H1-204ENST00000580947 SPRYD7Q5W111 196 aa13.13□□□□□ -0.31
SUPT4H1-204ENST00000580947 XAGE2Q96GT9 111 aa13.13□□□□□ -0.31
SUPT4H1-204ENST00000580947 C1orf115Q9H7X2 142 aa13.13□□□□□ -0.31
SUPT4H1-204ENST00000580947 DAGLAQ9Y4D2 1042 aa13.13□□□□□ -0.31
SUPT4H1-204ENST00000580947 CENPFP49454 3210 aa13.13□□□□□ -0.31
SUPT4H1-204ENST00000580947 PHIPQ8WWQ0 1821 aa13.12□□□□□ -0.31
SUPT4H1-204ENST00000580947 TCP10L2B9ZVM9 353 aa13.12□□□□□ -0.31
SUPT4H1-204ENST00000580947 PPP1R12BO60237 982 aaPredicted RBP13.12□□□□□ -0.31
SUPT4H1-204ENST00000580947 TRPA1O75762 1119 aa13.12□□□□□ -0.31
SUPT4H1-204ENST00000580947 ATP8B2P98198 1209 aa13.12□□□□□ -0.31
SUPT4H1-204ENST00000580947 FAM83AQ86UY5 434 aa13.12□□□□□ -0.31
SUPT4H1-204ENST00000580947 GNL3LQ9NVN8 582 aaKnown RBP13.12□□□□□ -0.31
SUPT4H1-204ENST00000580947 DENND2AQ9ULE3 1009 aa13.12□□□□□ -0.31
SUPT4H1-204ENST00000580947 AKAP2Q9Y2D5 859 aa13.12□□□□□ -0.31
SUPT4H1-204ENST00000580947 GJA5P36382 358 aa13.11□□□□□ -0.31
SUPT4H1-204ENST00000580947 MKRN3Q13064 507 aaKnown RBP13.11□□□□□ -0.31
SUPT4H1-204ENST00000580947 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.11□□□□□ -0.31
SUPT4H1-204ENST00000580947 ITPRIPQ8IWB1 547 aa13.11□□□□□ -0.31
SUPT4H1-204ENST00000580947 FTSJ3Q8IY81 847 aaKnown RBP13.11□□□□□ -0.31
SUPT4H1-204ENST00000580947 PANK1Q8TE04 598 aa13.11□□□□□ -0.31
SUPT4H1-204ENST00000580947 ZNF384Q8TF68 577 aa13.11□□□□□ -0.31
SUPT4H1-204ENST00000580947 WNK4Q96J92 1243 aa13.11□□□□□ -0.31
SUPT4H1-204ENST00000580947 NOP58Q9Y2X3 529 aaKnown RBP13.11□□□□□ -0.31
SUPT4H1-204ENST00000580947 SIPA1L1O43166 1804 aa13.11□□□□□ -0.31
SUPT4H1-204ENST00000580947 GAKO14976 1311 aa13.11□□□□□ -0.31
SUPT4H1-204ENST00000580947 LDHBP07195 334 aaKnown RBP13.1□□□□□ -0.31
SUPT4H1-204ENST00000580947 ZBTB48P10074 688 aaPredicted RBP13.1□□□□□ -0.31
SUPT4H1-204ENST00000580947 ARID4AP29374 1257 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms