RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 GPAA1O43292 621 aa16.6■□□□□ 0.25
CDK5RAP3-219ENST00000580670 DZIP1Q86YF9 867 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-219ENST00000580670 VPS33BQ9H267 617 aa16.6■□□□□ 0.25
CDK5RAP3-219ENST00000580670 IGSF3O75054 1194 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 GRIK5Q16478 980 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 LARGE2Q8N3Y3 721 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 ZNF384Q8TF68 577 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 MAP4K1Q92918 833 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 AIDAQ96BJ3 306 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 TAOK3Q9H2K8 898 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 CCDC88AQ3V6T2 1871 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 MAST2Q6P0Q8 1798 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 HSPA4P34932 840 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 VPS53Q5VIR6 699 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 TMED8Q6PL24 325 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 ADGRA1Q86SQ6 560 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 KCNQ5Q9NR82 932 aa16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 RBM8AQ9Y5S9 174 aaKnown RBP16.59■□□□□ 0.25
CDK5RAP3-219ENST00000580670 ARFGEF1Q9Y6D6 1849 aa16.58■□□□□ 0.24
CDK5RAP3-219ENST00000580670 MBD4O95243 580 aa16.58■□□□□ 0.24
CDK5RAP3-219ENST00000580670 HSPD1P10809 573 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-219ENST00000580670 MIGA1Q8NAN2 632 aa16.58■□□□□ 0.24
CDK5RAP3-219ENST00000580670 SYT17Q9BSW7 474 aa16.58■□□□□ 0.24
CDK5RAP3-219ENST00000580670 DSCC1Q9BVC3 393 aa16.58■□□□□ 0.24
CDK5RAP3-219ENST00000580670 NFKBIEO00221 500 aa16.57■□□□□ 0.24
CDK5RAP3-219ENST00000580670 IARSP41252 1262 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-219ENST00000580670 GSTO1P78417 241 aa16.57■□□□□ 0.24
CDK5RAP3-219ENST00000580670 ARMT1Q9H993 441 aa16.57■□□□□ 0.24
CDK5RAP3-219ENST00000580670 MAGEB6P1A0A0J9YX57 407 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 USP17L3A6NCW0 530 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 USP17L4A6NCW7 530 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 YDJCA8MPS7 323 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 STRIP1Q5VSL9 837 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 USP17L1Q7RTZ2 530 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 CERS5Q8N5B7 392 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 STRBPQ96SI9 672 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 KIF2CQ99661 725 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 MXD3Q9BW11 206 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 PALD1Q9ULE6 856 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 SUGT1Q9Y2Z0 365 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 U3KPZ7 1027 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 SCN9AQ15858 1988 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 NECTIN1Q15223 517 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 NIM1KQ8IY84 436 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 LCORLQ8N3X6 602 aa16.56■□□□□ 0.24
CDK5RAP3-219ENST00000580670 LTBP3Q9NS15 1303 aa16.55■□□□□ 0.24
CDK5RAP3-219ENST00000580670 COL4A5P29400 1685 aa16.55■□□□□ 0.24
CDK5RAP3-219ENST00000580670 SOCS7O14512 581 aa16.55■□□□□ 0.24
CDK5RAP3-219ENST00000580670 DIXDC1Q155Q3 683 aa16.55■□□□□ 0.24
CDK5RAP3-219ENST00000580670 GOLGB1Q14789 3259 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-219ENST00000580670 F8W031 263 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 FOXP2O15409 715 aa16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 LDHCP07864 332 aa16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 ANAPC15P60006 121 aa16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 FKBP1AP62942 108 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 RASSF7Q02833 373 aa16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 DACT2Q5SW24 774 aa16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 CREB3L3Q68CJ9 461 aa16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 RIOK1Q9BRS2 568 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 APPP05067 770 aa16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 GNAT2P19087 354 aa16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 DYNLL1P63167 89 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 NBR1Q14596 966 aa16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 RNF20Q5VTR2 975 aa16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 SLF2Q8IX21 1173 aa16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 RASEFQ8IZ41 740 aa16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 AATFQ9NY61 560 aaKnown RBP eCLIP16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 ZNRF3Q9ULT6 936 aa16.54■□□□□ 0.24
CDK5RAP3-219ENST00000580670 MYH2Q9UKX2 1941 aa16.53■□□□□ 0.24
CDK5RAP3-219ENST00000580670 PATL2C9JE40 543 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-219ENST00000580670 SLC27A2O14975 620 aa16.53■□□□□ 0.24
CDK5RAP3-219ENST00000580670 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-219ENST00000580670 JDP2Q8WYK2 163 aa16.53■□□□□ 0.24
CDK5RAP3-219ENST00000580670 TTF2Q9UNY4 1162 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-219ENST00000580670 SNX14Q9Y5W7 946 aa16.53■□□□□ 0.24
CDK5RAP3-219ENST00000580670 SLC4A4Q9Y6R1 1079 aa16.53■□□□□ 0.24
CDK5RAP3-219ENST00000580670 MROH7-TTC4A0A0A0MT08 1334 aa16.53■□□□□ 0.24
CDK5RAP3-219ENST00000580670 PRKAB2O43741 272 aa16.52■□□□□ 0.24
CDK5RAP3-219ENST00000580670 RAD17O75943 681 aa16.52■□□□□ 0.24
CDK5RAP3-219ENST00000580670 KCNB2Q92953 911 aa16.52■□□□□ 0.24
CDK5RAP3-219ENST00000580670 NOL10Q9BSC4 688 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP3-219ENST00000580670 CTNNA3Q9UI47 895 aa16.52■□□□□ 0.24
CDK5RAP3-219ENST00000580670 ZNF646O15015 1829 aaPredicted RBP16.52■□□□□ 0.23
CDK5RAP3-219ENST00000580670 BAG3O95817 575 aa16.51■□□□□ 0.23
CDK5RAP3-219ENST00000580670 FGAP02671 866 aa16.51■□□□□ 0.23
CDK5RAP3-219ENST00000580670 RABEP1Q15276 862 aa16.51■□□□□ 0.23
CDK5RAP3-219ENST00000580670 ARHGAP27Q6ZUM4 889 aa16.51■□□□□ 0.23
CDK5RAP3-219ENST00000580670 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
CDK5RAP3-219ENST00000580670 GSG1L2A8MUP6 293 aa16.51■□□□□ 0.23
CDK5RAP3-219ENST00000580670 SCNN1DP51172 638 aa16.51■□□□□ 0.23
CDK5RAP3-219ENST00000580670 KIAA0825Q8IV33 1275 aa16.51■□□□□ 0.23
CDK5RAP3-219ENST00000580670 FAM163AQ96GL9 167 aaPredicted RBP16.51■□□□□ 0.23
CDK5RAP3-219ENST00000580670 PSME4Q14997 1843 aa16.51■□□□□ 0.23
CDK5RAP3-219ENST00000580670 PSMD14O00487 310 aa16.5■□□□□ 0.23
CDK5RAP3-219ENST00000580670 BTDP43251 543 aa16.5■□□□□ 0.23
CDK5RAP3-219ENST00000580670 ALX1Q15699 326 aa16.5■□□□□ 0.23
CDK5RAP3-219ENST00000580670 IFNL3Q8IZI9 196 aa16.5■□□□□ 0.23
CDK5RAP3-219ENST00000580670 DDRGK1Q96HY6 314 aa16.5■□□□□ 0.23
CDK5RAP3-219ENST00000580670 CRNKL1Q9BZJ0 848 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms