RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 ZC3H12CQ9C0D7 883 aaKnown RBP3.25□□□□□ -1.89
CTC1-207ENST00000580299 HMX1Q9NP08 348 aaPredicted RBP3.25□□□□□ -1.89
CTC1-207ENST00000580299 COG5Q9UP83 839 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 SCAF8Q9UPN6 1271 aaKnown RBP3.25□□□□□ -1.89
CTC1-207ENST00000580299 KCNH4Q9UQ05 1017 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 CSADQ9Y600 493 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 FAM208BQ5VWN6 2430 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 PHIPQ8WWQ0 1821 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 SPEF2Q9C093 1822 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 MYO3BQ8WXR4 1341 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.24□□□□□ -1.89
CTC1-207ENST00000580299 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.24□□□□□ -1.89
CTC1-207ENST00000580299 NBPF26B4DH59 902 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 ERC2O15083 957 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 A1BGP04217 495 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 U2AF1L5P0DN76 240 aaPredicted RBP3.24□□□□□ -1.89
CTC1-207ENST00000580299 ELNP15502 786 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 GJA5P36382 358 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 KCNQ1P51787 676 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 U2AF1Q01081 240 aaKnown RBP eCLIP3.24□□□□□ -1.89
CTC1-207ENST00000580299 TEFQ10587 303 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 IRF5Q13568 498 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 EIF4A2Q14240 407 aaKnown RBP3.24□□□□□ -1.89
CTC1-207ENST00000580299 ST3GAL2Q16842 350 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 NBPF9Q3BBW0 867 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 KIF6Q6ZMV9 814 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 PPP1R42Q7Z4L9 355 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 RIC3Q7Z5B4 369 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 FAM43AQ8N2R8 423 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 MICALL1Q8N3F8 863 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 MTMR14Q8NCE2 650 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 HERVK_113Q902F9 699 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 PRDM12Q9H4Q4 367 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 ELP3Q9H9T3 547 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 CPA4Q9UI42 421 aa3.24□□□□□ -1.89
CTC1-207ENST00000580299 NSFL1CQ9UNZ2 370 aaKnown RBP3.24□□□□□ -1.89
CTC1-207ENST00000580299 TRANK1O15050 2925 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 PFASO15067 1338 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 PTPRFP10586 1907 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 LOC105371045A0A1W2PR82 267 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 USP17L3A6NCW0 530 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 USP17L4A6NCW7 530 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 WNT10BO00744 389 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 TNPO2O14787 897 aaKnown RBP3.23□□□□□ -1.89
CTC1-207ENST00000580299 RNMTO43148 476 aaKnown RBP3.23□□□□□ -1.89
CTC1-207ENST00000580299 MYO1BO43795 1136 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 GTPBP6O43824 516 aaPredicted RBP3.23□□□□□ -1.89
CTC1-207ENST00000580299 GABBR2O75899 941 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 SASH1O94885 1247 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 HMGCRP04035 888 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 CHRM1P11229 460 aaPredicted RBP3.23□□□□□ -1.89
CTC1-207ENST00000580299 SSTR3P32745 418 aaPredicted RBP3.23□□□□□ -1.89
CTC1-207ENST00000580299 FLT3LGP49771 235 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 TFF2Q03403 129 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 SNAPC2Q13487 334 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 GRAPQ13588 217 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 PKN1Q16512 942 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 LRRC26Q2I0M4 334 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 C9orf50Q5SZB4 431 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 C17orf99Q6UX52 265 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 CCDC129Q6ZRS4 1044 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 USP17L1Q7RTZ2 530 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 SLC51AQ86UW1 340 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 GRAPLQ8TC17 118 aaPredicted RBP3.23□□□□□ -1.89
CTC1-207ENST00000580299 COA7Q96BR5 231 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 MS4A4AQ96JQ5 239 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 CNTNAP3BQ96NU0 1288 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 PHOX2BQ99453 314 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 PARK7Q99497 189 aaKnown RBP3.23□□□□□ -1.89
CTC1-207ENST00000580299 CNTNAP3Q9BZ76 1288 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 DEFB129Q9H1M3 183 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 PRDM5Q9NQX1 630 aaPredicted RBP3.23□□□□□ -1.89
CTC1-207ENST00000580299 OGDHLQ9ULD0 1010 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 ZFHX2Q9C0A1 2572 aaPredicted RBP3.23□□□□□ -1.89
CTC1-207ENST00000580299 FAM186AA6NE01 2351 aa3.23□□□□□ -1.89
CTC1-207ENST00000580299 MAP1BP46821 2468 aaKnown RBP3.22□□□□□ -1.89
CTC1-207ENST00000580299 COL3A1P02461 1466 aaPredicted RBP3.22□□□□□ -1.89
CTC1-207ENST00000580299 MYBBP1AQ9BQG0 1328 aaKnown RBP3.22□□□□□ -1.89
CTC1-207ENST00000580299 XIRP2A4UGR9 3374 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 TPRP12270 2363 aaKnown RBP3.22□□□□□ -1.89
CTC1-207ENST00000580299 BTBD19C9JJ37 291 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 DCXO43602 365 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 GPTP24298 496 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 TNFAIP1Q13829 316 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 RAB30Q15771 203 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 PARP10Q53GL7 1025 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 ZNF790Q6PG37 636 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 CCDC174Q6PII3 467 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 DGLUCYQ7Z3D6 616 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 PODNQ7Z5L7 613 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 RASEFQ8IZ41 740 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 SPOCK2Q92563 424 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 FBXW7Q969H0 707 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 KCNQ5Q9NR82 932 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 DACH1Q9UI36 760 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 MSRAQ9UJ68 235 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 GABRQQ9UN88 632 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 FZD1Q9UP38 647 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 COL4A4P53420 1690 aaPredicted RBP3.22□□□□□ -1.89
CTC1-207ENST00000580299 ACACBO00763 2458 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms