RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ATP2B4P23634 1241 aa15.11■□□□□ 0.01
CDK5RAP3-217ENST00000580287 DOK7Q18PE1 504 aa15.11■□□□□ 0.01
CDK5RAP3-217ENST00000580287 MCTP1Q6DN14 999 aa15.11■□□□□ 0.01
CDK5RAP3-217ENST00000580287 MYO5AQ9Y4I1 1855 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 RFX7Q2KHR2 1363 aa15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 GOLGA6L22H0YM25 854 aa15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 BAG4O95429 457 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 ZFYP08048 801 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 DPP8Q6V1X1 898 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 ARMT1Q9H993 441 aa15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 CD209Q9NNX6 404 aa15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 C21orf2O43822 256 aa15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 CYP21A2P08686 494 aa15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 DPEP1P16444 411 aa15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 HAND2P61296 217 aa15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 NUCB2P80303 420 aa15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 FOXD4L6Q3SYB3 417 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 FOXD4L3Q6VB84 417 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 SLC16A10Q8TF71 515 aa15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 JAKMIP1Q96N16 626 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-217ENST00000580287 PRKAB2O43741 272 aa15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 NCLP19338 710 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 CASTP20810 708 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 CYP7A1P22680 504 aa15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 UBE3CQ15386 1083 aa15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 GRPEL1Q9HAV7 217 aa15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 A0A1B0GUL6 1792 aa15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 MBD4O95243 580 aa15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 APPP05067 770 aa15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 LRRFIP1Q32MZ4 808 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 TDRD7Q8NHU6 1098 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 CWC22Q9HCG8 908 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 KCNQ5Q9NR82 932 aa15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 COL11A2P13942 1736 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-217ENST00000580287 FGAP02671 866 aa15.08■□□□□ 0
CDK5RAP3-217ENST00000580287 KCNA3P22001 575 aa15.08■□□□□ 0
CDK5RAP3-217ENST00000580287 MCM2P49736 904 aa15.08■□□□□ 0
CDK5RAP3-217ENST00000580287 ZSCAN25Q6NSZ9 544 aa15.08■□□□□ 0
CDK5RAP3-217ENST00000580287 ZNF804AQ7Z570 1209 aa15.08■□□□□ 0
CDK5RAP3-217ENST00000580287 LCORLQ8N3X6 602 aa15.08■□□□□ 0
CDK5RAP3-217ENST00000580287 ARAP2Q8WZ64 1704 aa15.08■□□□□ 0
CDK5RAP3-217ENST00000580287 DYNLL1P63167 89 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-217ENST00000580287 MECOMQ03112 1051 aa15.08■□□□□ 0
CDK5RAP3-217ENST00000580287 STYK1Q6J9G0 422 aa15.08■□□□□ 0
CDK5RAP3-217ENST00000580287 AIDAQ96BJ3 306 aa15.08■□□□□ 0
CDK5RAP3-217ENST00000580287 MXD3Q9BW11 206 aa15.08■□□□□ 0
CDK5RAP3-217ENST00000580287 DDX49Q9Y6V7 483 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-217ENST00000580287 FBXW7Q969H0 707 aa15.07■□□□□ 0
CDK5RAP3-217ENST00000580287 STRBPQ96SI9 672 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-217ENST00000580287 ZC3H12CQ9C0D7 883 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-217ENST00000580287 ZDHHC9Q9Y397 364 aa15.07■□□□□ 0
CDK5RAP3-217ENST00000580287 ZKSCAN1P17029 563 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-217ENST00000580287 STOX1Q6ZVD7 989 aa15.07■□□□□ 0
CDK5RAP3-217ENST00000580287 DBNDD1Q9H9R9 158 aa15.07■□□□□ 0
CDK5RAP3-217ENST00000580287 DIXDC1Q155Q3 683 aa15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 STK11IPQ8N1F8 1099 aa15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 C7orf43Q8WVR3 580 aa15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 NSUN4Q96CB9 384 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 MTFR1LQ9H019 292 aa15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 TMX4Q9H1E5 349 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 SMIM22K7EJ46 135 aa15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 EPB41L2O43491 1005 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 BRD2P25440 801 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 GTF2IP78347 998 aa15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 NAA16Q6N069 864 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 SDR42E1Q8WUS8 393 aa15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 CNKSR1Q969H4 720 aa15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 DSCC1Q9BVC3 393 aa15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-217ENST00000580287 TMC4Q7Z404 712 aa15.05■□□□□ 0
CDK5RAP3-217ENST00000580287 KCNB2Q92953 911 aa15.05■□□□□ 0
CDK5RAP3-217ENST00000580287 INCENPQ9NQS7 918 aa15.05■□□□□ 0
CDK5RAP3-217ENST00000580287 SEMA3EO15041 775 aa15.05■□□□□ -0
CDK5RAP3-217ENST00000580287 CLCN1P35523 988 aa15.05■□□□□ -0
CDK5RAP3-217ENST00000580287 ILDR2Q71H61 639 aa15.05■□□□□ -0
CDK5RAP3-217ENST00000580287 LRRC2Q9BYS8 371 aa15.05■□□□□ -0
CDK5RAP3-217ENST00000580287 SLX4Q8IY92 1834 aa15.05■□□□□ -0
CDK5RAP3-217ENST00000580287 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 C15orf52Q6ZUT6 534 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 CHST3Q7LGC8 479 aa15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 NKX2-3Q8TAU0 364 aa15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 NAP1L5Q96NT1 182 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 EPB41L4AQ9HCS5 686 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 AATFQ9NY61 560 aaKnown RBP eCLIP15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 C10orf71Q711Q0 1435 aa15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 F8W031 263 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 IL1R1P14778 569 aa15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 POLD1P28340 1107 aa15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 MRE11P49959 708 aa15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 RNF20Q5VTR2 975 aa15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 CAVIN1Q6NZI2 390 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 TTLL6Q8N841 843 aa15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 RBM27Q9P2N5 1060 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-217ENST00000580287 PRPF40AO75400 957 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-217ENST00000580287 AK2P54819 239 aa15.03■□□□□ -0
CDK5RAP3-217ENST00000580287 MFSD14BQ5SR56 506 aa15.03■□□□□ -0
CDK5RAP3-217ENST00000580287 SLC4A4Q9Y6R1 1079 aa15.03■□□□□ -0
CDK5RAP3-217ENST00000580287 LDHBP07195 334 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-217ENST00000580287 PTMSP20962 102 aa15.03■□□□□ -0
CDK5RAP3-217ENST00000580287 AOC3Q16853 763 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms