RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 PHKA1P46020 1223 aa11.31□□□□□ -0.6
BPTF-211ENST00000578307 HAND2P61296 217 aa11.31□□□□□ -0.6
BPTF-211ENST00000578307 PIP4K2BP78356 416 aa11.31□□□□□ -0.6
BPTF-211ENST00000578307 UBE3CQ15386 1083 aa11.31□□□□□ -0.6
BPTF-211ENST00000578307 FAM173BQ6P4H8 233 aa11.31□□□□□ -0.6
BPTF-211ENST00000578307 CHST3Q7LGC8 479 aa11.31□□□□□ -0.6
BPTF-211ENST00000578307 RALYLQ86SE5 291 aaKnown RBP11.31□□□□□ -0.6
BPTF-211ENST00000578307 NCOA7Q8NI08 942 aa11.31□□□□□ -0.6
BPTF-211ENST00000578307 ZNF622Q969S3 477 aaKnown RBP eCLIP11.31□□□□□ -0.6
BPTF-211ENST00000578307 PDLIM2Q96JY6 352 aa11.31□□□□□ -0.6
BPTF-211ENST00000578307 SPATA32Q96LK8 384 aa11.31□□□□□ -0.6
BPTF-211ENST00000578307 ZNF831Q5JPB2 1677 aa11.31□□□□□ -0.6
BPTF-211ENST00000578307 PTPDC1A2A3K4 754 aa11.3□□□□□ -0.6
BPTF-211ENST00000578307 GOLGA6L4A6NEF3 574 aa11.3□□□□□ -0.6
BPTF-211ENST00000578307 IGHMBP2P38935 993 aaKnown RBP11.3□□□□□ -0.6
BPTF-211ENST00000578307 CCT2P78371 535 aaKnown RBP11.3□□□□□ -0.6
BPTF-211ENST00000578307 HELBQ8NG08 1087 aaPredicted RBP11.3□□□□□ -0.6
BPTF-211ENST00000578307 DOCK2Q92608 1830 aa11.3□□□□□ -0.6
BPTF-211ENST00000578307 RTL9Q8NET4 1388 aa11.3□□□□□ -0.6
BPTF-211ENST00000578307 CCDC66A2RUB6 948 aa11.3□□□□□ -0.6
BPTF-211ENST00000578307 NTSR2O95665 410 aa11.3□□□□□ -0.6
BPTF-211ENST00000578307 PDIA3P30101 505 aaKnown RBP11.3□□□□□ -0.6
BPTF-211ENST00000578307 GTF2F1P35269 517 aaKnown RBP eCLIP11.3□□□□□ -0.66e-6■■■■□ 21.5
BPTF-211ENST00000578307 RESTQ13127 1097 aa11.3□□□□□ -0.6
BPTF-211ENST00000578307 PIH1D3Q9NQM4 214 aaKnown RBP11.3□□□□□ -0.6
BPTF-211ENST00000578307 GEMIN8Q9NWZ8 242 aaKnown RBP11.3□□□□□ -0.6
BPTF-211ENST00000578307 ZNF532Q9HCE3 1301 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 PRC1O43663 620 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 EVCP57679 992 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 TRDNQ13061 729 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 NAA16Q6N069 864 aaPredicted RBP11.29□□□□□ -0.6
BPTF-211ENST00000578307 SPATA5Q8NB90 893 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 SEC31BQ9NQW1 1179 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 CFAP45Q9UL16 551 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 WDR19Q8NEZ3 1342 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 CTDNEP1O95476 244 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 APPP05067 770 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 PDE6AP16499 860 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 FAM193AP78312 1265 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 UVSSAQ2YD98 709 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
BPTF-211ENST00000578307 MB21D2Q8IYB1 491 aaPredicted RBP11.29□□□□□ -0.6
BPTF-211ENST00000578307 LEO1Q8WVC0 666 aaPredicted RBP11.29□□□□□ -0.6
BPTF-211ENST00000578307 PRIMPOLQ96LW4 560 aa11.29□□□□□ -0.6
BPTF-211ENST00000578307 TFIP11Q9UBB9 837 aaKnown RBP11.29□□□□□ -0.6
BPTF-211ENST00000578307 KCNQ2O43526 872 aa11.28□□□□□ -0.6
BPTF-211ENST00000578307 DHX16O60231 1041 aaKnown RBP11.28□□□□□ -0.6
BPTF-211ENST00000578307 GABPB1Q06547 395 aaPredicted RBP11.28□□□□□ -0.6
BPTF-211ENST00000578307 MAP3K12Q12852 859 aa11.28□□□□□ -0.6
BPTF-211ENST00000578307 FAM98CQ17RN3 349 aaKnown RBP11.28□□□□□ -0.6
BPTF-211ENST00000578307 CLEC4GQ6UXB4 293 aa11.28□□□□□ -0.6
BPTF-211ENST00000578307 AIDAQ96BJ3 306 aa11.28□□□□□ -0.6
BPTF-211ENST00000578307 NCOA5Q9HCD5 579 aaKnown RBP11.28□□□□□ -0.6
BPTF-211ENST00000578307 SALL1Q9NSC2 1324 aa11.28□□□□□ -0.6
BPTF-211ENST00000578307 CHD4Q14839 1912 aa11.27□□□□□ -0.6
BPTF-211ENST00000578307 IRX5P78411 483 aaPredicted RBP11.27□□□□□ -0.6
BPTF-211ENST00000578307 GIMAP6Q6P9H5 292 aa11.27□□□□□ -0.6
BPTF-211ENST00000578307 MYRIPQ8NFW9 859 aa11.27□□□□□ -0.6
BPTF-211ENST00000578307 WWC3Q9ULE0 1092 aa11.27□□□□□ -0.6
BPTF-211ENST00000578307 KLF18A0A0U1RQI7 1052 aa11.27□□□□□ -0.61
BPTF-211ENST00000578307 TCRBV5S4A2TA0A5A2 114 aa11.27□□□□□ -0.61
BPTF-211ENST00000578307 RASGRF1Q13972 1273 aa11.27□□□□□ -0.61
BPTF-211ENST00000578307 CDC5LQ99459 802 aaKnown RBP11.27□□□□□ -0.61
BPTF-211ENST00000578307 NUP62CLQ9H1M0 184 aa11.27□□□□□ -0.61
BPTF-211ENST00000578307 CARMIL3Q8ND23 1372 aa11.27□□□□□ -0.61
BPTF-211ENST00000578307 CASZ1Q86V15 1759 aa11.27□□□□□ -0.61
BPTF-211ENST00000578307 FOSBP53539 338 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 NGLY1Q96IV0 654 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 GOLGA8BA8MQT2 603 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 CCDC192P0DO97 292 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 LIG1P18858 919 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 ANTXR2P58335 489 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 CHRNDQ07001 517 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 VPS72Q15906 364 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 MAP3K11Q16584 847 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 ATL3Q6DD88 541 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 MAGEB6Q8N7X4 407 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 LINC00116Q8NCU8 138 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 BICD2Q8TD16 824 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 ZNF396Q96N95 335 aaPredicted RBP11.26□□□□□ -0.61
BPTF-211ENST00000578307 C8orf37Q96NL8 207 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 STRBPQ96SI9 672 aaKnown RBP11.26□□□□□ -0.61
BPTF-211ENST00000578307 FEZ1Q99689 392 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 ARID3AQ99856 593 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 FUCA2Q9BTY2 467 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 GPHNQ9NQX3 736 aaPredicted RBP11.26□□□□□ -0.61
BPTF-211ENST00000578307 DDX19AQ9NUU7 478 aaKnown RBP11.26□□□□□ -0.61
BPTF-211ENST00000578307 CGNQ9P2M7 1197 aaKnown RBP11.26□□□□□ -0.61
BPTF-211ENST00000578307 CCDC39Q9UFE4 941 aa11.26□□□□□ -0.61
BPTF-211ENST00000578307 ZMYM6O95789 1325 aa11.25□□□□□ -0.61
BPTF-211ENST00000578307 PATL2C9JE40 543 aaKnown RBP11.25□□□□□ -0.61
BPTF-211ENST00000578307 SNAP23O00161 211 aa11.25□□□□□ -0.61
BPTF-211ENST00000578307 CPLX1O14810 134 aa11.25□□□□□ -0.61
BPTF-211ENST00000578307 PTMAP06454 111 aaKnown RBP11.25□□□□□ -0.61
BPTF-211ENST00000578307 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
BPTF-211ENST00000578307 ALX1Q15699 326 aa11.25□□□□□ -0.61
BPTF-211ENST00000578307 CREBRFQ8IUR6 639 aa11.25□□□□□ -0.61
BPTF-211ENST00000578307 ZKSCAN5Q9Y2L8 839 aa11.25□□□□□ -0.61
BPTF-211ENST00000578307 SCN7AQ01118 1682 aa11.25□□□□□ -0.61
BPTF-211ENST00000578307 A0A1B0GUL6 1792 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms