RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 ACTN4O43707 911 aaKnown RBP12.1□□□□□ -0.47
SEC22B-201ENST00000578049 RHOXF2BP0C7M4 288 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 U2AF2P26368 475 aaKnown RBP eCLIP12.1□□□□□ -0.472e-7■■■□□ 14.7
SEC22B-201ENST00000578049 USHBP1Q8N6Y0 703 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 KIAA1524Q8TCG1 905 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 XAGE3Q8WTP9 111 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 RHOXF2Q9BQY4 288 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 CABP5Q9NP86 173 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 IFT20Q8IY31 132 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 CBX8Q9HC52 389 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 ZBTB16Q05516 673 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 DTHD1Q6ZMT9 781 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 KRBA2Q6ZNG9 492 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 LEO1Q8WVC0 666 aaPredicted RBP12.09□□□□□ -0.47
SEC22B-201ENST00000578049 LRRC2Q9BYS8 371 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 SLC4A4Q9Y6R1 1079 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 NPATQ14207 1427 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 ZEB2O60315 1214 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 DHX37Q8IY37 1157 aaKnown RBP12.09□□□□□ -0.47
SEC22B-201ENST00000578049 GTF3C6Q969F1 213 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 NKIRAS1Q9NYS0 192 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 PPFIA4O75335 1185 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 NLRP12P59046 1061 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 EIF4A2Q14240 407 aaKnown RBP12.09□□□□□ -0.47
SEC22B-201ENST00000578049 DAAM2Q86T65 1068 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 CSRNP2Q9H175 543 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 MAP3K5Q99683 1374 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 MRFAP1L1Q96HT8 127 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 NUCKS1Q9H1E3 243 aaKnown RBP12.09□□□□□ -0.47
SEC22B-201ENST00000578049 GOLGA6CA6NDK9 693 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 ATP5J2-PTCD1G3V325 749 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 GOLGA6DP0CG33 693 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 C8orf74Q6P047 294 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 GOLGA6AQ9NYA3 693 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 PLCH2O75038 1416 aa12.09□□□□□ -0.47
SEC22B-201ENST00000578049 PLCG2P16885 1265 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 FCHSD1Q86WN1 690 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 DRC1Q96MC2 740 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 KCNH3Q9ULD8 1083 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 STX8Q9UNK0 236 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 ATP2C2O75185 946 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 DEXIO95424 95 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 CYP7A1P22680 504 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 SH3BGRP55822 239 aaPredicted RBP12.08□□□□□ -0.48
SEC22B-201ENST00000578049 APOBRQ0VD83 1088 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 PPIP5K1Q6PFW1 1433 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 PHACTR2O75167 634 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 MTMR3Q13615 1198 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 URB2Q14146 1524 aaKnown RBP12.08□□□□□ -0.48
SEC22B-201ENST00000578049 NDC80O14777 642 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 PAK2Q13177 524 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 MSH6P52701 1360 aa12.08□□□□□ -0.48
SEC22B-201ENST00000578049 TSPY3P0CV98 308 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 TSPY8P0CW00 308 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 SF3B2Q13435 895 aaKnown RBP12.07□□□□□ -0.48
SEC22B-201ENST00000578049 LMNTD2Q8IXW0 634 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 CCDC84Q86UT8 332 aaPredicted RBP12.07□□□□□ -0.48
SEC22B-201ENST00000578049 CARD6Q9BX69 1037 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 SNX14Q9Y5W7 946 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 NAPAP54920 295 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 MSANTD4Q8NCY6 345 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 GLT8D2Q9H1C3 349 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 WHAMMP3Q1A5X7 153 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 SELENOSQ9BQE4 189 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 STK24Q9Y6E0 443 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 MXRA7P84157 204 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 TBC1D8BQ0IIM8 1120 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 ELF2Q15723 593 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 PPP2R5EQ16537 467 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 CFAP57Q96MR6 1250 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 IMPG2Q9BZV3 1241 aa12.07□□□□□ -0.48
SEC22B-201ENST00000578049 KIAA0232Q92628 1395 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 A0A1B0GVL5 298 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 DDX21Q9NR30 783 aaKnown RBP eCLIP12.06□□□□□ -0.48
SEC22B-201ENST00000578049 CNNM4Q6P4Q7 775 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 INTS8Q75QN2 995 aaKnown RBP12.06□□□□□ -0.48
SEC22B-201ENST00000578049 CACNA2D3Q8IZS8 1091 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 TSPYL6Q8N831 410 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 CAPZA3Q96KX2 299 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 BCL2L12Q9HB09 334 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 RAPGEF6Q8TEU7 1601 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 GOLGA6BA6NDN3 693 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 RPGRQ92834 1020 aaKnown RBP12.06□□□□□ -0.48
SEC22B-201ENST00000578049 NOX5Q96PH1 765 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 ZRANB1Q9UGI0 708 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 SLC27A2O14975 620 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 ATP11AP98196 1134 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 HSP90AA4PQ58FG1 418 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 RAB11FIP4Q86YS3 637 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 MED4Q9NPJ6 270 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 ATP6V0A2Q9Y487 856 aa12.06□□□□□ -0.48
SEC22B-201ENST00000578049 CCDC65Q8IXS2 484 aa12.05□□□□□ -0.48
SEC22B-201ENST00000578049 IFT81Q8WYA0 676 aa12.05□□□□□ -0.48
SEC22B-201ENST00000578049 TNNQ9UQP3 1299 aa12.05□□□□□ -0.48
SEC22B-201ENST00000578049 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.05□□□□□ -0.48
SEC22B-201ENST00000578049 CFAP43Q8NDM7 1665 aa12.05□□□□□ -0.48
SEC22B-201ENST00000578049 EFCAB8A8MWE9 144 aa12.05□□□□□ -0.48
SEC22B-201ENST00000578049 SEL1L2Q5TEA6 688 aa12.05□□□□□ -0.48
SEC22B-201ENST00000578049 PSDA5PKW4 1024 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms