RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 KLHDC4Q8TBB5 520 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 EDC4Q6P2E9 1401 aaKnown RBP14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 GOLGA6L10A0A0M3HER8 536 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 CUTAO60888 179 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 SLC5A1P13866 664 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 ADKP55263 362 aaKnown RBP14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 SLC39A6Q13433 755 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 CFAP58Q5T655 872 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 SLC9C2Q5TAH2 1124 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 PROSER2Q86WR7 435 aaPredicted RBP14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 CNNM2Q9H8M5 875 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
PCDHGB3-201ENST00000576222 DBNDD2Q9BQY9 259 aa14.86□□□□□ -0.03
PCDHGB3-201ENST00000576222 C11orf57Q6ZUT1 292 aaPredicted RBP14.86□□□□□ -0.03
PCDHGB3-201ENST00000576222 RAB34Q9BZG1 259 aa14.86□□□□□ -0.03
PCDHGB3-201ENST00000576222 STRN4Q9NRL3 753 aa14.86□□□□□ -0.03
PCDHGB3-201ENST00000576222 EXOC1Q9NV70 894 aa14.86□□□□□ -0.03
PCDHGB3-201ENST00000576222 TNNI3KQ59H18 835 aa14.86□□□□□ -0.03
PCDHGB3-201ENST00000576222 FPGT-TNNI3KV9GXZ4 949 aa14.86□□□□□ -0.03
PCDHGB3-201ENST00000576222 SEC31AO94979 1220 aaKnown RBP14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 CLCN6P51797 869 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 MYSM1Q5VVJ2 828 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 CYP26C1Q6V0L0 522 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 GIGYF2Q6Y7W6 1299 aaKnown RBP14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 TMTC1Q8IUR5 882 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 A0A0D9SFI3 127 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 POLR2DO15514 142 aaKnown RBP14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 STARD3NLO95772 234 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 CALML4Q96GE6 196 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 VPS16Q9H269 839 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 PLXNC1O60486 1568 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 ZNF853P0CG23 659 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 ATP2B2Q01814 1243 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 RABEP2Q9H5N1 569 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 RILPL1Q5EBL4 403 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 IFT81Q8WYA0 676 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 RABGGTAQ92696 567 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 PCDHA7Q9UN72 937 aa14.85□□□□□ -0.03
PCDHGB3-201ENST00000576222 HOXB7P09629 217 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 HNRNPH2P55795 449 aaKnown RBP14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 RBM6P78332 1123 aaKnown RBP14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 PRPF4BQ13523 1007 aaKnown RBP14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 IQUBQ8NA54 791 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 DESI2Q9BSY9 194 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 NAA30Q147X3 362 aaPredicted RBP14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 TMEM266Q2M3C6 531 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 MSL1Q68DK7 614 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 KBTBD3Q8NAB2 608 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 MMRN2Q9H8L6 949 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 ARHGEF5Q12774 1597 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 LARGE1O95461 756 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 PFKFB1P16118 471 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 IFNL2Q8IZJ0 200 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 MAP4K1Q92918 833 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 USP5P45974 858 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 TRIM14Q14142 442 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 MKNK2Q9HBH9 465 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 DDX21Q9NR30 783 aaKnown RBP eCLIP14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 SEC63Q9UGP8 760 aaKnown RBP14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 TRMT112Q9UI30 125 aaKnown RBP14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 NDUFB9Q9Y6M9 179 aa14.84□□□□□ -0.03
PCDHGB3-201ENST00000576222 PLA2R1Q13018 1463 aa14.83□□□□□ -0.03
PCDHGB3-201ENST00000576222 TTC37Q6PGP7 1564 aa14.83□□□□□ -0.03
PCDHGB3-201ENST00000576222 MACROD2A1Z1Q3 448 aa14.83□□□□□ -0.03
PCDHGB3-201ENST00000576222 GOLGA6BA6NDN3 693 aa14.83□□□□□ -0.03
PCDHGB3-201ENST00000576222 A6NNZ2 444 aa14.83□□□□□ -0.03
PCDHGB3-201ENST00000576222 PPP1R12BO60237 982 aaPredicted RBP14.83□□□□□ -0.03
PCDHGB3-201ENST00000576222 KIF5BP33176 963 aa14.83□□□□□ -0.03
PCDHGB3-201ENST00000576222 TIMM10P62072 90 aa14.83□□□□□ -0.03
PCDHGB3-201ENST00000576222 TUBB8Q3ZCM7 444 aa14.83□□□□□ -0.03
PCDHGB3-201ENST00000576222 EDC3Q96F86 508 aaKnown RBP14.83□□□□□ -0.03
PCDHGB3-201ENST00000576222 PTCH1Q13635 1447 aa14.83□□□□□ -0.04
PCDHGB3-201ENST00000576222 UQCRFS1P1P0C7P4 283 aa14.83□□□□□ -0.04
PCDHGB3-201ENST00000576222 KRT9P35527 623 aa14.83□□□□□ -0.04
PCDHGB3-201ENST00000576222 PNOCQ13519 176 aa14.83□□□□□ -0.04
PCDHGB3-201ENST00000576222 TRMT44Q8IYL2 757 aaKnown RBP14.83□□□□□ -0.04
PCDHGB3-201ENST00000576222 SCLT1Q96NL6 688 aa14.83□□□□□ -0.04
PCDHGB3-201ENST00000576222 SUCLG2Q96I99 432 aa14.83□□□□□ -0.04
PCDHGB3-201ENST00000576222 PDE11AQ9HCR9 933 aa14.83□□□□□ -0.04
PCDHGB3-201ENST00000576222 PFKFB2O60825 505 aa14.83□□□□□ -0.04
PCDHGB3-201ENST00000576222 PNMA6AP0CW24 399 aaPredicted RBP14.83□□□□□ -0.04
PCDHGB3-201ENST00000576222 IFI16Q16666 785 aaKnown RBP14.83□□□□□ -0.04
PCDHGB3-201ENST00000576222 CPLX4Q7Z7G2 160 aa14.83□□□□□ -0.04
PCDHGB3-201ENST00000576222 A0A087WWV3 80 aa14.82□□□□□ -0.04
PCDHGB3-201ENST00000576222 POSTNQ15063 836 aa14.82□□□□□ -0.04
PCDHGB3-201ENST00000576222 ESR2Q92731 530 aa14.82□□□□□ -0.04
PCDHGB3-201ENST00000576222 TAOK3Q9H2K8 898 aa14.82□□□□□ -0.04
PCDHGB3-201ENST00000576222 RRP15Q9Y3B9 282 aaKnown RBP14.82□□□□□ -0.04
PCDHGB3-201ENST00000576222 ANKRD62A6NC57 917 aa14.82□□□□□ -0.04
PCDHGB3-201ENST00000576222 GPTP24298 496 aa14.82□□□□□ -0.04
PCDHGB3-201ENST00000576222 NDUFA8P51970 172 aa14.82□□□□□ -0.04
PCDHGB3-201ENST00000576222 EAF2Q96CJ1 260 aaPredicted RBP14.82□□□□□ -0.04
PCDHGB3-201ENST00000576222 CABP5Q9NP86 173 aa14.82□□□□□ -0.04
PCDHGB3-201ENST00000576222 ZSCAN20P17040 1043 aaPredicted RBP14.82□□□□□ -0.04
PCDHGB3-201ENST00000576222 KRT40Q6A162 431 aa14.82□□□□□ -0.04
PCDHGB3-201ENST00000576222 SYNRGQ9UMZ2 1314 aa14.82□□□□□ -0.04
PCDHGB3-201ENST00000576222 ARID5BQ14865 1188 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 SLF1Q9BQI6 1058 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 PRDM11Q9NQV5 511 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms