RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 LRP2BPQ9P2M1 347 aa33.74■■■□□ 2.99
CTDNEP1-210ENST00000574322 ST3GAL1Q11201 340 aa33.73■■■□□ 2.99
CTDNEP1-210ENST00000574322 TCEANC2Q96MN5 208 aa33.73■■■□□ 2.99
CTDNEP1-210ENST00000574322 XDHP47989 1333 aa33.73■■■□□ 2.99
CTDNEP1-210ENST00000574322 BAG4O95429 457 aaKnown RBP33.73■■■□□ 2.99
CTDNEP1-210ENST00000574322 CRAMP1Q96RY5 1269 aa33.73■■■□□ 2.99
CTDNEP1-210ENST00000574322 CD2APQ9Y5K6 639 aa33.73■■■□□ 2.99
CTDNEP1-210ENST00000574322 BBOX1O75936 387 aa33.72■■■□□ 2.99
CTDNEP1-210ENST00000574322 KLRK1P26718 216 aa33.72■■■□□ 2.99
CTDNEP1-210ENST00000574322 TMED8Q6PL24 325 aaPredicted RBP33.71■■■□□ 2.99
CTDNEP1-210ENST00000574322 Q6ZUG5 572 aa33.71■■■□□ 2.99
CTDNEP1-210ENST00000574322 CCDC83Q8IWF9 413 aa33.71■■■□□ 2.99
CTDNEP1-210ENST00000574322 IQSEC3Q9UPP2 1182 aaPredicted RBP33.71■■■□□ 2.99
CTDNEP1-210ENST00000574322 MYH13Q9UKX3 1938 aa33.71■■■□□ 2.99
CTDNEP1-210ENST00000574322 PATL2C9JE40 543 aaKnown RBP33.7■■■□□ 2.99
CTDNEP1-210ENST00000574322 IGSF3O75054 1194 aa33.7■■■□□ 2.99
CTDNEP1-210ENST00000574322 GNAT2P19087 354 aa33.7■■■□□ 2.99
CTDNEP1-210ENST00000574322 SMC3Q9UQE7 1217 aa33.7■■■□□ 2.99
CTDNEP1-210ENST00000574322 SRCAPQ6ZRS2 3230 aa33.7■■■□□ 2.99
CTDNEP1-210ENST00000574322 ZNF213O14771 459 aa33.7■■■□□ 2.98
CTDNEP1-210ENST00000574322 CACNA1SQ13698 1873 aa33.69■■■□□ 2.98
CTDNEP1-210ENST00000574322 MBD4O95243 580 aa33.68■■■□□ 2.98
CTDNEP1-210ENST00000574322 TMC4Q7Z404 712 aa33.68■■■□□ 2.98
CTDNEP1-210ENST00000574322 FHDC1Q9C0D6 1143 aaPredicted RBP33.68■■■□□ 2.98
CTDNEP1-210ENST00000574322 ANKRD31Q8N7Z5 1873 aa33.68■■■□□ 2.98
CTDNEP1-210ENST00000574322 WDR19Q8NEZ3 1342 aa33.68■■■□□ 2.98
CTDNEP1-210ENST00000574322 C2CD5Q86YS7 1000 aa33.67■■■□□ 2.98
CTDNEP1-210ENST00000574322 ANKIB1Q9P2G1 1089 aa33.67■■■□□ 2.98
CTDNEP1-210ENST00000574322 WDR33Q9C0J8 1336 aaKnown RBP33.67■■■□□ 2.98
CTDNEP1-210ENST00000574322 H0YIN7 160 aa33.67■■■□□ 2.98
CTDNEP1-210ENST00000574322 TGFB2P61812 414 aa33.67■■■□□ 2.98
CTDNEP1-210ENST00000574322 PDIA4P13667 645 aaKnown RBP33.66■■■□□ 2.98
CTDNEP1-210ENST00000574322 CHRNA5P30532 468 aa33.66■■■□□ 2.98
CTDNEP1-210ENST00000574322 ABCF2Q9UG63 623 aa33.66■■■□□ 2.98
CTDNEP1-210ENST00000574322 LRRC37AA6NMS7 1700 aa33.65■■■□□ 2.98
CTDNEP1-210ENST00000574322 GOLGA6L22H0YM25 854 aa33.65■■■□□ 2.98
CTDNEP1-210ENST00000574322 TXNRD3Q86VQ6 643 aa33.65■■■□□ 2.98
CTDNEP1-210ENST00000574322 NECAB1Q8N987 351 aa33.65■■■□□ 2.98
CTDNEP1-210ENST00000574322 CYP7A1P22680 504 aa33.65■■■□□ 2.98
CTDNEP1-210ENST00000574322 HAND2P61296 217 aa33.65■■■□□ 2.98
CTDNEP1-210ENST00000574322 MB21D2Q8IYB1 491 aaPredicted RBP33.65■■■□□ 2.98
CTDNEP1-210ENST00000574322 IFNL3Q8IZI9 196 aa33.65■■■□□ 2.98
CTDNEP1-210ENST00000574322 ARMT1Q9H993 441 aa33.65■■■□□ 2.98
CTDNEP1-210ENST00000574322 PODXL2Q9NZ53 605 aa33.65■■■□□ 2.98
CTDNEP1-210ENST00000574322 RAI14Q9P0K7 980 aa33.65■■■□□ 2.98
CTDNEP1-210ENST00000574322 KIF13BQ9NQT8 1826 aa33.64■■■□□ 2.98
CTDNEP1-210ENST00000574322 GSG1L2A8MUP6 293 aa33.64■■■□□ 2.98
CTDNEP1-210ENST00000574322 SRGNP10124 158 aa33.64■■■□□ 2.98
CTDNEP1-210ENST00000574322 EVCP57679 992 aa33.64■■■□□ 2.98
CTDNEP1-210ENST00000574322 NCOA7Q8NI08 942 aa33.64■■■□□ 2.98
CTDNEP1-210ENST00000574322 NBPF3Q9H094 633 aa33.64■■■□□ 2.98
CTDNEP1-210ENST00000574322 APPP05067 770 aa33.63■■■□□ 2.97
CTDNEP1-210ENST00000574322 ATP2B4P23634 1241 aa33.63■■■□□ 2.97
CTDNEP1-210ENST00000574322 BRF1Q92994 677 aa33.63■■■□□ 2.97
CTDNEP1-210ENST00000574322 GTF3C6Q969F1 213 aa33.63■■■□□ 2.97
CTDNEP1-210ENST00000574322 EPB41L4AQ9HCS5 686 aaPredicted RBP33.63■■■□□ 2.97
CTDNEP1-210ENST00000574322 DPEP1P16444 411 aa33.62■■■□□ 2.97
CTDNEP1-210ENST00000574322 GJB2P29033 226 aa33.62■■■□□ 2.97
CTDNEP1-210ENST00000574322 LCORLQ8N3X6 602 aa33.62■■■□□ 2.97
CTDNEP1-210ENST00000574322 SALL1Q9NSC2 1324 aa33.62■■■□□ 2.97
CTDNEP1-210ENST00000574322 TRAK2O60296 914 aa33.62■■■□□ 2.97
CTDNEP1-210ENST00000574322 NPR1P16066 1061 aa33.62■■■□□ 2.97
CTDNEP1-210ENST00000574322 GPSM2P81274 684 aa33.62■■■□□ 2.97
CTDNEP1-210ENST00000574322 MASTLQ96GX5 879 aa33.62■■■□□ 2.97
CTDNEP1-210ENST00000574322 SYT1P21579 422 aa33.61■■■□□ 2.97
CTDNEP1-210ENST00000574322 MCM5P33992 734 aa33.61■■■□□ 2.97
CTDNEP1-210ENST00000574322 NLGN2Q8NFZ4 835 aa33.61■■■□□ 2.97
CTDNEP1-210ENST00000574322 TDRD7Q8NHU6 1098 aaKnown RBP33.61■■■□□ 2.97
CTDNEP1-210ENST00000574322 ZNF622Q969S3 477 aaKnown RBP eCLIP33.61■■■□□ 2.97
CTDNEP1-210ENST00000574322 MAST2Q6P0Q8 1798 aa33.61■■■□□ 2.97
CTDNEP1-210ENST00000574322 PFKFB2O60825 505 aa33.6■■■□□ 2.97
CTDNEP1-210ENST00000574322 FGD1P98174 961 aa33.6■■■□□ 2.97
CTDNEP1-210ENST00000574322 SKOR2Q2VWA4 1001 aaPredicted RBP33.6■■■□□ 2.97
CTDNEP1-210ENST00000574322 ADGRA1Q86SQ6 560 aa33.6■■■□□ 2.97
CTDNEP1-210ENST00000574322 SYT17Q9BSW7 474 aa33.6■■■□□ 2.97
CTDNEP1-210ENST00000574322 NACAP1Q9BZK3 213 aa33.6■■■□□ 2.97
CTDNEP1-210ENST00000574322 STX6O43752 255 aa33.59■■■□□ 2.97
CTDNEP1-210ENST00000574322 ZNF384Q8TF68 577 aa33.59■■■□□ 2.97
CTDNEP1-210ENST00000574322 NSUN4Q96CB9 384 aaKnown RBP33.59■■■□□ 2.97
CTDNEP1-210ENST00000574322 ZNF274Q96GC6 653 aaPredicted RBP33.59■■■□□ 2.97
CTDNEP1-210ENST00000574322 RIOK1Q9BRS2 568 aaKnown RBP33.59■■■□□ 2.97
CTDNEP1-210ENST00000574322 NAPBQ9H115 298 aa33.59■■■□□ 2.97
CTDNEP1-210ENST00000574322 LTBP1Q14766 1721 aa33.59■■■□□ 2.97
CTDNEP1-210ENST00000574322 TIAM2Q8IVF5 1701 aa33.59■■■□□ 2.97
CTDNEP1-210ENST00000574322 NAA16Q6N069 864 aaPredicted RBP33.59■■■□□ 2.97
CTDNEP1-210ENST00000574322 ZNF804AQ7Z570 1209 aa33.59■■■□□ 2.97
CTDNEP1-210ENST00000574322 LRRC2Q9BYS8 371 aa33.59■■■□□ 2.97
CTDNEP1-210ENST00000574322 MAGEB6P1A0A0J9YX57 407 aa33.58■■■□□ 2.97
CTDNEP1-210ENST00000574322 GSE1Q14687 1217 aa33.58■■■□□ 2.97
CTDNEP1-210ENST00000574322 STYK1Q6J9G0 422 aa33.58■■■□□ 2.97
CTDNEP1-210ENST00000574322 RALYLQ86SE5 291 aaKnown RBP33.58■■■□□ 2.97
CTDNEP1-210ENST00000574322 TBC1D10CQ8IV04 446 aa33.58■■■□□ 2.97
CTDNEP1-210ENST00000574322 SP8Q8IXZ3 490 aa33.58■■■□□ 2.97
CTDNEP1-210ENST00000574322 SLC4A4Q9Y6R1 1079 aa33.58■■■□□ 2.97
CTDNEP1-210ENST00000574322 KIAA1551Q9HCM1 1747 aa33.58■■■□□ 2.97
CTDNEP1-210ENST00000574322 SPTY2D1Q68D10 685 aaPredicted RBP33.57■■■□□ 2.96
CTDNEP1-210ENST00000574322 SLC51AQ86UW1 340 aa33.57■■■□□ 2.96
CTDNEP1-210ENST00000574322 CHMP4CQ96CF2 233 aa33.57■■■□□ 2.96
CTDNEP1-210ENST00000574322 LLPHQ9BRT6 129 aaKnown RBP33.57■■■□□ 2.96
CTDNEP1-210ENST00000574322 GGA1Q9UJY5 639 aa33.57■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms