RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 TEPSINQ96N21 525 aa21.72■■□□□ 1.07
SMG6-214ENST00000573827 MRIQ9BWK5 157 aa21.72■■□□□ 1.07
SMG6-214ENST00000573827 TDRD3Q9H7E2 651 aaKnown RBP21.72■■□□□ 1.07
SMG6-214ENST00000573827 RNF186Q9NXI6 227 aa21.72■■□□□ 1.07
SMG6-214ENST00000573827 SAGE1Q9NXZ1 904 aa21.72■■□□□ 1.07
SMG6-214ENST00000573827 CEP126Q9P2H0 1117 aa21.72■■□□□ 1.07
SMG6-214ENST00000573827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.72■■□□□ 1.07
SMG6-214ENST00000573827 MYO1BO43795 1136 aa21.71■■□□□ 1.07
SMG6-214ENST00000573827 NBPF12Q5TAG4 269 aaPredicted RBP21.71■■□□□ 1.07
SMG6-214ENST00000573827 ZKSCAN2Q63HK3 967 aa21.71■■□□□ 1.07
SMG6-214ENST00000573827 CDAN1Q8IWY9 1227 aa21.71■■□□□ 1.07
SMG6-214ENST00000573827 TMEM57Q8N5G2 664 aa21.71■■□□□ 1.07
SMG6-214ENST00000573827 VEZTQ9HBM0 779 aa21.71■■□□□ 1.07
SMG6-214ENST00000573827 SUGT1Q9Y2Z0 365 aa21.71■■□□□ 1.07
SMG6-214ENST00000573827 SRGAP3O43295 1099 aa21.7■■□□□ 1.06
SMG6-214ENST00000573827 ADORA1P30542 326 aa21.7■■□□□ 1.06
SMG6-214ENST00000573827 RBM5P52756 815 aaKnown RBP eCLIP21.7■■□□□ 1.06
SMG6-214ENST00000573827 PRKG1Q13976 671 aa21.7■■□□□ 1.06
SMG6-214ENST00000573827 APOBEC3HQ6NTF7 200 aaKnown RBP21.7■■□□□ 1.06
SMG6-214ENST00000573827 RLBP1P12271 317 aa21.69■■□□□ 1.06
SMG6-214ENST00000573827 TTLL12Q14166 644 aaPredicted RBP21.69■■□□□ 1.06
SMG6-214ENST00000573827 ARMC9Q7Z3E5 817 aa21.69■■□□□ 1.06
SMG6-214ENST00000573827 ZDHHC15Q96MV8 337 aa21.69■■□□□ 1.06
SMG6-214ENST00000573827 ANGEL1Q9UNK9 670 aaKnown RBP21.69■■□□□ 1.06
SMG6-214ENST00000573827 PNMA6EA0A0J9YXQ4 647 aa21.68■■□□□ 1.06
SMG6-214ENST00000573827 GNAI2P04899 355 aa21.68■■□□□ 1.06
SMG6-214ENST00000573827 PHKA1P46020 1223 aa21.68■■□□□ 1.06
SMG6-214ENST00000573827 REM2Q8IYK8 340 aaPredicted RBP21.68■■□□□ 1.06
SMG6-214ENST00000573827 AKAP11Q9UKA4 1901 aa21.67■■□□□ 1.06
SMG6-214ENST00000573827 FRAT2O75474 233 aaPredicted RBP21.67■■□□□ 1.06
SMG6-214ENST00000573827 USP2O75604 605 aaPredicted RBP21.67■■□□□ 1.06
SMG6-214ENST00000573827 WDR66Q8TBY9 1149 aa21.67■■□□□ 1.06
SMG6-214ENST00000573827 TEKT1Q969V4 418 aa21.67■■□□□ 1.06
SMG6-214ENST00000573827 CLMNQ96JQ2 1002 aa21.67■■□□□ 1.06
SMG6-214ENST00000573827 MYH13Q9UKX3 1938 aa21.67■■□□□ 1.06
SMG6-214ENST00000573827 SALL1Q9NSC2 1324 aa21.66■■□□□ 1.06
SMG6-214ENST00000573827 TRPA1O75762 1119 aa21.66■■□□□ 1.06
SMG6-214ENST00000573827 CAPN15O75808 1086 aa21.66■■□□□ 1.06
SMG6-214ENST00000573827 TM4SF4P48230 202 aa21.66■■□□□ 1.06
SMG6-214ENST00000573827 SUPT20HL1Q3ZLR7 823 aa21.66■■□□□ 1.06
SMG6-214ENST00000573827 SPRYD7Q5W111 196 aa21.66■■□□□ 1.06
SMG6-214ENST00000573827 HHIPL2Q6UWX4 724 aa21.66■■□□□ 1.06
SMG6-214ENST00000573827 UNCXA6NJT0 531 aa21.65■■□□□ 1.06
SMG6-214ENST00000573827 TIMM10P62072 90 aa21.65■■□□□ 1.06
SMG6-214ENST00000573827 TFCP2Q12800 502 aa21.65■■□□□ 1.06
SMG6-214ENST00000573827 TNFAIP1Q13829 316 aa21.65■■□□□ 1.06
SMG6-214ENST00000573827 CCDC102BQ68D86 513 aa21.65■■□□□ 1.06
SMG6-214ENST00000573827 TMEM39BQ9GZU3 492 aa21.65■■□□□ 1.06
SMG6-214ENST00000573827 HTTP42858 3142 aa21.64■■□□□ 1.06
SMG6-214ENST00000573827 TCP10L2B9ZVM9 353 aa21.64■■□□□ 1.05
SMG6-214ENST00000573827 SEMA3EO15041 775 aa21.64■■□□□ 1.05
SMG6-214ENST00000573827 PRDX5P30044 214 aa21.64■■□□□ 1.05
SMG6-214ENST00000573827 CACNB3P54284 484 aa21.64■■□□□ 1.05
SMG6-214ENST00000573827 POLA2Q14181 598 aa21.64■■□□□ 1.05
SMG6-214ENST00000573827 ABHD8Q96I13 439 aa21.64■■□□□ 1.05
SMG6-214ENST00000573827 LAMB1P07942 1786 aa21.64■■□□□ 1.05
SMG6-214ENST00000573827 OTOFQ9HC10 1997 aa21.63■■□□□ 1.05
SMG6-214ENST00000573827 MAST3O60307 1309 aa21.63■■□□□ 1.05
SMG6-214ENST00000573827 A0A1B0GUL7 405 aa21.63■■□□□ 1.05
SMG6-214ENST00000573827 PPP1R12BO60237 982 aaPredicted RBP21.63■■□□□ 1.05
SMG6-214ENST00000573827 RASGRF1Q13972 1273 aa21.63■■□□□ 1.05
SMG6-214ENST00000573827 FKBP1CQ5VVH2 108 aa21.63■■□□□ 1.05
SMG6-214ENST00000573827 DAGLAQ9Y4D2 1042 aa21.63■■□□□ 1.05
SMG6-214ENST00000573827 PDS5AQ29RF7 1337 aaKnown RBP21.62■■□□□ 1.05
SMG6-214ENST00000573827 ZBTB7BO15156 539 aaPredicted RBP21.62■■□□□ 1.05
SMG6-214ENST00000573827 GJA5P36382 358 aa21.62■■□□□ 1.05
SMG6-214ENST00000573827 MKRN3Q13064 507 aaKnown RBP21.62■■□□□ 1.05
SMG6-214ENST00000573827 DIXDC1Q155Q3 683 aa21.62■■□□□ 1.05
SMG6-214ENST00000573827 SSH3Q8TE77 659 aa21.62■■□□□ 1.05
SMG6-214ENST00000573827 XAGE2Q96GT9 111 aa21.62■■□□□ 1.05
SMG6-214ENST00000573827 GNL3LQ9NVN8 582 aaKnown RBP21.62■■□□□ 1.05
SMG6-214ENST00000573827 FAM83AQ86UY5 434 aa21.61■■□□□ 1.05
SMG6-214ENST00000573827 WNK4Q96J92 1243 aa21.61■■□□□ 1.05
SMG6-214ENST00000573827 DENND2AQ9ULE3 1009 aa21.61■■□□□ 1.05
SMG6-214ENST00000573827 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.6■■□□□ 1.05
SMG6-214ENST00000573827 SLC10A4Q96EP9 437 aa21.6■■□□□ 1.05
SMG6-214ENST00000573827 CFHR5Q9BXR6 569 aa21.6■■□□□ 1.05
SMG6-214ENST00000573827 MCOLN1Q9GZU1 580 aa21.6■■□□□ 1.05
SMG6-214ENST00000573827 ZBTB48P10074 688 aaPredicted RBP21.59■■□□□ 1.05
SMG6-214ENST00000573827 IREB2P48200 963 aaKnown RBP21.59■■□□□ 1.05
SMG6-214ENST00000573827 ATP8B2P98198 1209 aa21.59■■□□□ 1.05
SMG6-214ENST00000573827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.59■■□□□ 1.05
SMG6-214ENST00000573827 C1orf115Q9H7X2 142 aa21.59■■□□□ 1.05
SMG6-214ENST00000573827 AKAP2Q9Y2D5 859 aa21.59■■□□□ 1.05
SMG6-214ENST00000573827 RPAP1Q9BWH6 1393 aaPredicted RBP21.59■■□□□ 1.05
SMG6-214ENST00000573827 TNNI2P48788 182 aa21.58■■□□□ 1.05
SMG6-214ENST00000573827 CDC42EP5Q6NZY7 148 aa21.58■■□□□ 1.05
SMG6-214ENST00000573827 ANKRD13AQ8IZ07 590 aa21.58■■□□□ 1.05
SMG6-214ENST00000573827 ZNF384Q8TF68 577 aa21.58■■□□□ 1.05
SMG6-214ENST00000573827 R3HDMLQ9H3Y0 253 aa21.58■■□□□ 1.05
SMG6-214ENST00000573827 GAKO14976 1311 aa21.57■■□□□ 1.04
SMG6-214ENST00000573827 LDHBP07195 334 aaKnown RBP21.57■■□□□ 1.04
SMG6-214ENST00000573827 SREBF2Q12772 1141 aa21.57■■□□□ 1.04
SMG6-214ENST00000573827 NFIAQ12857 509 aa21.57■■□□□ 1.04
SMG6-214ENST00000573827 RFX7Q2KHR2 1363 aa21.57■■□□□ 1.04
SMG6-214ENST00000573827 IGF2BP3O00425 579 aaKnown RBP eCLIP21.56■■□□□ 1.04
SMG6-214ENST00000573827 TBC1D8O95759 1140 aa21.56■■□□□ 1.04
SMG6-214ENST00000573827 MVPQ14764 893 aaKnown RBP21.56■■□□□ 1.04
SMG6-214ENST00000573827 NOM1Q5C9Z4 860 aaKnown RBP21.56■■□□□ 1.04
SMG6-214ENST00000573827 FTSJ3Q8IY81 847 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms