RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 TTC39BQ5VTQ0 682 aaPredicted RBP8.17□□□□□ -1.1
SF3B3-214ENST00000572365 ORAI2Q96SN7 254 aa8.17□□□□□ -1.1
SF3B3-214ENST00000572365 BACH2Q9BYV9 841 aa8.17□□□□□ -1.1
SF3B3-214ENST00000572365 ZFATQ9P243 1243 aa8.17□□□□□ -1.1
SF3B3-214ENST00000572365 PHF24Q9UPV7 400 aa8.17□□□□□ -1.1
SF3B3-214ENST00000572365 FYCO1Q9BQS8 1478 aa8.17□□□□□ -1.1
SF3B3-214ENST00000572365 EREGO14944 169 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 MMP20O60882 483 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 LRP5O75197 1615 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 TCF3P15923 654 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 UTRNP46939 3433 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 VEGFBP49765 207 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.16□□□□□ -1.1
SF3B3-214ENST00000572365 ASXL1Q8IXJ9 1541 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 GALNT12Q8IXK2 581 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 OR13H1Q8NG92 308 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 NANOS1Q8WY41 292 aaKnown RBP8.16□□□□□ -1.1
SF3B3-214ENST00000572365 SLC30A3Q99726 388 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 SETD5Q9C0A6 1442 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 MRS2Q9HD23 443 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 SPG7Q9UQ90 795 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 TBX22Q9Y458 520 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 AK5Q9Y6K8 562 aa8.16□□□□□ -1.1
SF3B3-214ENST00000572365 ATRNO75882 1429 aa8.15□□□□□ -1.1
SF3B3-214ENST00000572365 GIPC1O14908 333 aa8.15□□□□□ -1.1
SF3B3-214ENST00000572365 RARAP10276 462 aa8.15□□□□□ -1.1
SF3B3-214ENST00000572365 CD33P20138 364 aa8.15□□□□□ -1.1
SF3B3-214ENST00000572365 FGFR3P22607 806 aa8.15□□□□□ -1.1
SF3B3-214ENST00000572365 CES1P23141 567 aa8.15□□□□□ -1.1
SF3B3-214ENST00000572365 TSNAXIP1Q2TAA8 658 aa8.15□□□□□ -1.1
SF3B3-214ENST00000572365 FOXR1Q6PIV2 292 aa8.15□□□□□ -1.1
SF3B3-214ENST00000572365 KRT25Q7Z3Z0 450 aa8.15□□□□□ -1.1
SF3B3-214ENST00000572365 EPS8L3Q8TE67 593 aaKnown RBP8.15□□□□□ -1.1
SF3B3-214ENST00000572365 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.15□□□□□ -1.1
SF3B3-214ENST00000572365 NHSL1Q5SYE7 1610 aa8.14□□□□□ -1.11
SF3B3-214ENST00000572365 BLMP54132 1417 aaPredicted RBP8.14□□□□□ -1.11
SF3B3-214ENST00000572365 PTPRUQ92729 1446 aa8.14□□□□□ -1.11
SF3B3-214ENST00000572365 RIMS2Q9UQ26 1411 aa8.14□□□□□ -1.11
SF3B3-214ENST00000572365 CYP2E1P05181 493 aaPredicted RBP8.14□□□□□ -1.11
SF3B3-214ENST00000572365 HOXD8P13378 290 aaPredicted RBP8.14□□□□□ -1.11
SF3B3-214ENST00000572365 NFKB1P19838 968 aa8.14□□□□□ -1.11
SF3B3-214ENST00000572365 IRS1P35568 1242 aa8.14□□□□□ -1.11
SF3B3-214ENST00000572365 SOX18P35713 384 aa8.14□□□□□ -1.11
SF3B3-214ENST00000572365 PI16Q6UXB8 463 aa8.14□□□□□ -1.11
SF3B3-214ENST00000572365 TRERF1Q96PN7 1200 aa8.14□□□□□ -1.11
SF3B3-214ENST00000572365 PNMA5Q96PV4 448 aa8.14□□□□□ -1.11
SF3B3-214ENST00000572365 NLRP2Q9NX02 1062 aa8.14□□□□□ -1.11
SF3B3-214ENST00000572365 TLR7Q9NYK1 1049 aaKnown RBP8.14□□□□□ -1.11
SF3B3-214ENST00000572365 VTI1BQ9UEU0 232 aa8.14□□□□□ -1.11
SF3B3-214ENST00000572365 POTECB2RU33 542 aa8.13□□□□□ -1.11
SF3B3-214ENST00000572365 POLR3DP05423 398 aaPredicted RBP8.13□□□□□ -1.11
SF3B3-214ENST00000572365 SV2AQ7L0J3 742 aa8.13□□□□□ -1.11
SF3B3-214ENST00000572365 VWA5B2Q8N398 1253 aa8.13□□□□□ -1.11
SF3B3-214ENST00000572365 NPHS2Q9NP85 383 aa8.13□□□□□ -1.11
SF3B3-214ENST00000572365 BCL9LQ86UU0 1499 aa8.13□□□□□ -1.11
SF3B3-214ENST00000572365 MST1RQ04912 1400 aa8.12□□□□□ -1.11
SF3B3-214ENST00000572365 PLEKHG1Q9ULL1 1385 aa8.12□□□□□ -1.11
SF3B3-214ENST00000572365 CDC14CA4D256 554 aa8.12□□□□□ -1.11
SF3B3-214ENST00000572365 PHF20L1A8MW92 1017 aa8.12□□□□□ -1.11
SF3B3-214ENST00000572365 SCAMP3O14828 347 aaKnown RBP8.12□□□□□ -1.11
SF3B3-214ENST00000572365 EDN3P14138 238 aa8.12□□□□□ -1.11
SF3B3-214ENST00000572365 CTBSQ01459 385 aa8.12□□□□□ -1.11
SF3B3-214ENST00000572365 BHMTQ93088 406 aa8.12□□□□□ -1.11
SF3B3-214ENST00000572365 OSBPL7Q9BZF2 842 aa8.12□□□□□ -1.11
SF3B3-214ENST00000572365 SALL4Q9UJQ4 1053 aa8.12□□□□□ -1.11
SF3B3-214ENST00000572365 GCC2Q8IWJ2 1684 aa8.11□□□□□ -1.11
SF3B3-214ENST00000572365 GPR25O00155 361 aa8.11□□□□□ -1.11
SF3B3-214ENST00000572365 KIF4AO95239 1232 aa8.11□□□□□ -1.11
SF3B3-214ENST00000572365 PSAPP07602 524 aa8.11□□□□□ -1.11
SF3B3-214ENST00000572365 EIF4BP23588 611 aaKnown RBP8.11□□□□□ -1.11
SF3B3-214ENST00000572365 NEUROD1Q13562 356 aa8.11□□□□□ -1.11
SF3B3-214ENST00000572365 EZH2Q15910 746 aaKnown RBP8.11□□□□□ -1.11
SF3B3-214ENST00000572365 CRELD1Q96HD1 420 aa8.11□□□□□ -1.11
SF3B3-214ENST00000572365 SRCIN1Q9C0H9 1055 aa8.11□□□□□ -1.11
SF3B3-214ENST00000572365 C12orf49Q9H741 205 aa8.11□□□□□ -1.11
SF3B3-214ENST00000572365 KANSL3Q9P2N6 904 aa8.11□□□□□ -1.11
SF3B3-214ENST00000572365 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-214ENST00000572365 ARHGAP31Q2M1Z3 1444 aa8.11□□□□□ -1.11
SF3B3-214ENST00000572365 ADAMTS13Q76LX8 1427 aa8.11□□□□□ -1.11
SF3B3-214ENST00000572365 ADGRB3O60242 1522 aa8.1□□□□□ -1.11
SF3B3-214ENST00000572365 CTSHP09668 335 aa8.1□□□□□ -1.11
SF3B3-214ENST00000572365 BAG6P46379 1132 aa8.1□□□□□ -1.11
SF3B3-214ENST00000572365 PLAURQ03405 335 aa8.1□□□□□ -1.11
SF3B3-214ENST00000572365 KIAA0319Q5VV43 1072 aa8.1□□□□□ -1.11
SF3B3-214ENST00000572365 PEAR1Q5VY43 1037 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-214ENST00000572365 DHX32Q7L7V1 743 aaKnown RBP8.1□□□□□ -1.11
SF3B3-214ENST00000572365 RAB44Q7Z6P3 723 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-214ENST00000572365 SUV39H2Q9H5I1 410 aa8.1□□□□□ -1.11
SF3B3-214ENST00000572365 CAMTA1Q9Y6Y1 1673 aa8.1□□□□□ -1.11
SF3B3-214ENST00000572365 ZFYVE9O95405 1425 aa8.1□□□□□ -1.11
SF3B3-214ENST00000572365 EIF2AK4Q9P2K8 1649 aaKnown RBP8.1□□□□□ -1.11
SF3B3-214ENST00000572365 ARHGEF5Q12774 1597 aa8.1□□□□□ -1.11
SF3B3-214ENST00000572365 RALGAPBQ86X10 1494 aa8.09□□□□□ -1.11
SF3B3-214ENST00000572365 A0A1W2PP55 124 aa8.09□□□□□ -1.11
SF3B3-214ENST00000572365 GADD45BO75293 160 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-214ENST00000572365 NRLP54845 237 aa8.09□□□□□ -1.11
SF3B3-214ENST00000572365 HYAL2Q12891 473 aa8.09□□□□□ -1.11
SF3B3-214ENST00000572365 ZNF468Q5VIY5 522 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-214ENST00000572365 KRT27Q7Z3Y8 459 aa8.09□□□□□ -1.11
SF3B3-214ENST00000572365 TMEM87AQ8NBN3 555 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms