RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 VPS37DQ86XT2 251 aa31.81■■■□□ 2.68
NME3-208ENST00000565379 NEUROD6Q96NK8 337 aa31.81■■■□□ 2.68
NME3-208ENST00000565379 PCDHAC2Q9Y5I4 1007 aa31.81■■■□□ 2.68
NME3-208ENST00000565379 MYO3BQ8WXR4 1341 aa31.8■■■□□ 2.68
NME3-208ENST00000565379 WNT10BO00744 389 aa31.8■■■□□ 2.68
NME3-208ENST00000565379 HIBADHP31937 336 aaKnown RBP31.8■■■□□ 2.68
NME3-208ENST00000565379 FBXO33Q7Z6M2 555 aa31.8■■■□□ 2.68
NME3-208ENST00000565379 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.8■■■□□ 2.68
NME3-208ENST00000565379 ZBTB22O15209 634 aa31.79■■■□□ 2.68
NME3-208ENST00000565379 CA12O43570 354 aa31.79■■■□□ 2.68
NME3-208ENST00000565379 IL1R1P14778 569 aa31.79■■■□□ 2.68
NME3-208ENST00000565379 GYG1P46976 350 aa31.79■■■□□ 2.68
NME3-208ENST00000565379 XAGE2Q96GT9 111 aa31.79■■■□□ 2.68
NME3-208ENST00000565379 ABHD8Q96I13 439 aa31.79■■■□□ 2.68
NME3-208ENST00000565379 FAM84BQ96KN1 310 aaPredicted RBP31.79■■■□□ 2.68
NME3-208ENST00000565379 IL1RAPL2Q9NP60 686 aa31.79■■■□□ 2.68
NME3-208ENST00000565379 PPP4R2Q9NY27 417 aa31.79■■■□□ 2.68
NME3-208ENST00000565379 AACSQ86V21 672 aa31.78■■■□□ 2.68
NME3-208ENST00000565379 OGFOD1Q8N543 542 aa31.78■■■□□ 2.68
NME3-208ENST00000565379 EAF2Q96CJ1 260 aaPredicted RBP31.78■■■□□ 2.68
NME3-208ENST00000565379 CCDC136Q96JN2 1154 aa31.78■■■□□ 2.68
NME3-208ENST00000565379 GNL3LQ9NVN8 582 aaKnown RBP31.78■■■□□ 2.68
NME3-208ENST00000565379 IFIT2P09913 472 aaKnown RBP31.77■■■□□ 2.68
NME3-208ENST00000565379 GORABQ5T7V8 394 aa31.77■■■□□ 2.68
NME3-208ENST00000565379 TSKSQ9UJT2 592 aa31.77■■■□□ 2.68
NME3-208ENST00000565379 F8W031 263 aaPredicted RBP31.76■■■□□ 2.67
NME3-208ENST00000565379 ANKRD45Q5TZF3 282 aa31.76■■■□□ 2.67
NME3-208ENST00000565379 MOB2Q70IA6 237 aa31.76■■■□□ 2.67
NME3-208ENST00000565379 C2orf69Q8N8R5 385 aa31.76■■■□□ 2.67
NME3-208ENST00000565379 ZBED3Q96IU2 234 aaPredicted RBP31.76■■■□□ 2.67
NME3-208ENST00000565379 AOX1Q06278 1338 aa31.75■■■□□ 2.67
NME3-208ENST00000565379 PITPNM2Q9BZ72 1349 aa31.75■■■□□ 2.67
NME3-208ENST00000565379 NOGQ13253 232 aa31.74■■■□□ 2.67
NME3-208ENST00000565379 CCDC158Q5M9N0 1113 aa31.74■■■□□ 2.67
NME3-208ENST00000565379 CENPQQ7L2Z9 268 aaPredicted RBP31.74■■■□□ 2.67
NME3-208ENST00000565379 ARAP2Q8WZ64 1704 aa31.74■■■□□ 2.67
NME3-208ENST00000565379 FAM155AB1AL88 458 aaPredicted RBP31.73■■■□□ 2.67
NME3-208ENST00000565379 SEMA3EO15041 775 aa31.73■■■□□ 2.67
NME3-208ENST00000565379 ADORA1P30542 326 aa31.73■■■□□ 2.67
NME3-208ENST00000565379 BCAMP50895 628 aa31.73■■■□□ 2.67
NME3-208ENST00000565379 CCDC102BQ68D86 513 aa31.73■■■□□ 2.67
NME3-208ENST00000565379 TDRD7Q8NHU6 1098 aaKnown RBP31.73■■■□□ 2.67
NME3-208ENST00000565379 CCDC8Q9H0W5 538 aaPredicted RBP31.73■■■□□ 2.67
NME3-208ENST00000565379 SMARCA5O60264 1052 aaPredicted RBP31.72■■■□□ 2.67
NME3-208ENST00000565379 NUCB1Q02818 461 aa31.72■■■□□ 2.67
NME3-208ENST00000565379 RGMBQ6NW40 437 aa31.72■■■□□ 2.67
NME3-208ENST00000565379 DBNDD2Q9BQY9 259 aa31.72■■■□□ 2.67
NME3-208ENST00000565379 DBNLQ9UJU6 430 aaKnown RBP31.72■■■□□ 2.67
NME3-208ENST00000565379 UQCRFS1P1P0C7P4 283 aa31.71■■■□□ 2.67
NME3-208ENST00000565379 ZNF512BQ96KM6 892 aaPredicted RBP31.71■■■□□ 2.67
NME3-208ENST00000565379 HDAC9Q9UKV0 1011 aa31.71■■■□□ 2.67
NME3-208ENST00000565379 IQSEC3Q9UPP2 1182 aaPredicted RBP31.71■■■□□ 2.67
NME3-208ENST00000565379 FRAT2O75474 233 aaPredicted RBP31.69■■■□□ 2.66
NME3-208ENST00000565379 CHD1LQ86WJ1 897 aa31.69■■■□□ 2.66
NME3-208ENST00000565379 GPATCH3Q96I76 525 aa31.69■■■□□ 2.66
NME3-208ENST00000565379 ARID4AP29374 1257 aaPredicted RBP31.68■■■□□ 2.66
NME3-208ENST00000565379 PHKA1P46020 1223 aa31.68■■■□□ 2.66
NME3-208ENST00000565379 ZNF157P51786 506 aaPredicted RBP31.68■■■□□ 2.66
NME3-208ENST00000565379 TTC39AQ5SRH9 613 aa31.68■■■□□ 2.66
NME3-208ENST00000565379 B4GALNT3Q6L9W6 998 aa31.68■■■□□ 2.66
NME3-208ENST00000565379 CCDC102AQ96A19 550 aa31.68■■■□□ 2.66
NME3-208ENST00000565379 DENND2AQ9ULE3 1009 aa31.68■■■□□ 2.66
NME3-208ENST00000565379 FAM205AQ6ZU69 1335 aa31.68■■■□□ 2.66
NME3-208ENST00000565379 PAPPA2Q9BXP8 1791 aa31.67■■■□□ 2.66
NME3-208ENST00000565379 GRIK5Q16478 980 aa31.67■■■□□ 2.66
NME3-208ENST00000565379 PDS5AQ29RF7 1337 aaKnown RBP31.67■■■□□ 2.66
NME3-208ENST00000565379 DLGAP5Q15398 846 aa31.66■■■□□ 2.66
NME3-208ENST00000565379 CFAP100Q494V2 611 aa31.66■■■□□ 2.66
NME3-208ENST00000565379 TLR7Q9NYK1 1049 aaKnown RBP31.66■■■□□ 2.66
NME3-208ENST00000565379 CLRN2A0PK11 232 aa31.65■■■□□ 2.66
NME3-208ENST00000565379 UBE2Q2LH0YL09 131 aa31.65■■■□□ 2.66
NME3-208ENST00000565379 FKBP1AP62942 108 aaKnown RBP31.65■■■□□ 2.66
NME3-208ENST00000565379 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.65■■■□□ 2.66
NME3-208ENST00000565379 SLC10A3P09131 477 aa31.64■■■□□ 2.66
NME3-208ENST00000565379 MFSD14BQ5SR56 506 aa31.64■■■□□ 2.66
NME3-208ENST00000565379 FZD1Q9UP38 647 aa31.64■■■□□ 2.66
NME3-208ENST00000565379 CASP8AP2Q9UKL3 1982 aa31.63■■■□□ 2.65
NME3-208ENST00000565379 KIF23Q02241 960 aaPredicted RBP31.63■■■□□ 2.65
NME3-208ENST00000565379 CHAF1AQ13111 956 aaPredicted RBP31.63■■■□□ 2.65
NME3-208ENST00000565379 RASAL3Q86YV0 1011 aa31.63■■■□□ 2.65
NME3-208ENST00000565379 WDR66Q8TBY9 1149 aa31.63■■■□□ 2.65
NME3-208ENST00000565379 TBC1D22AQ8WUA7 517 aa31.63■■■□□ 2.65
NME3-208ENST00000565379 PRMT6Q96LA8 375 aaPredicted RBP31.63■■■□□ 2.65
NME3-208ENST00000565379 LNPKQ9C0E8 428 aa31.63■■■□□ 2.65
NME3-208ENST00000565379 BCL11AQ9H165 835 aa31.63■■■□□ 2.65
NME3-208ENST00000565379 ECHDC1Q9NTX5 307 aa31.63■■■□□ 2.65
NME3-208ENST00000565379 SPDYE2BA6NHP3 402 aa31.62■■■□□ 2.65
NME3-208ENST00000565379 SPDYE6P0CI01 402 aa31.62■■■□□ 2.65
NME3-208ENST00000565379 MMP14P50281 582 aa31.62■■■□□ 2.65
NME3-208ENST00000565379 PRKG1Q13976 671 aa31.62■■■□□ 2.65
NME3-208ENST00000565379 TTC41PQ6P2S7 1318 aa31.62■■■□□ 2.65
NME3-208ENST00000565379 APOBEC3FQ8IUX4 373 aaKnown RBP31.62■■■□□ 2.65
NME3-208ENST00000565379 MTMR14Q8NCE2 650 aa31.62■■■□□ 2.65
NME3-208ENST00000565379 CCDC85CA6NKD9 419 aa31.61■■■□□ 2.65
NME3-208ENST00000565379 ATP5JP18859 108 aa31.6■■■□□ 2.65
NME3-208ENST00000565379 RASGRF1Q13972 1273 aa31.6■■■□□ 2.65
NME3-208ENST00000565379 TTLL12Q14166 644 aaPredicted RBP31.6■■■□□ 2.65
NME3-208ENST00000565379 TTF2Q9UNY4 1162 aaKnown RBP31.6■■■□□ 2.65
NME3-208ENST00000565379 ERC2O15083 957 aa31.59■■■□□ 2.65
NME3-208ENST00000565379 MX1P20591 662 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms