RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 CRHR2Q13324 411 aa16.82■□□□□ 0.28
SPG7-207ENST00000563218 TRMT2AQ8IZ69 625 aaKnown RBP16.82■□□□□ 0.28
SPG7-207ENST00000563218 CD99L2Q8TCZ2 262 aa16.82■□□□□ 0.28
SPG7-207ENST00000563218 FAM84BQ96KN1 310 aaPredicted RBP16.82■□□□□ 0.28
SPG7-207ENST00000563218 TEPSINQ96N21 525 aa16.82■□□□□ 0.28
SPG7-207ENST00000563218 PTPN18Q99952 460 aa16.82■□□□□ 0.28
SPG7-207ENST00000563218 ELP3Q9H9T3 547 aa16.82■□□□□ 0.28
SPG7-207ENST00000563218 TTF2Q9UNY4 1162 aaKnown RBP16.82■□□□□ 0.28
SPG7-207ENST00000563218 ALDH1A1P00352 501 aa16.81■□□□□ 0.28
SPG7-207ENST00000563218 NBPF7P0C2Y1 421 aaPredicted RBP16.81■□□□□ 0.28
SPG7-207ENST00000563218 IREB2P48200 963 aaKnown RBP16.81■□□□□ 0.28
SPG7-207ENST00000563218 SUPT20HL1Q3ZLR7 823 aa16.81■□□□□ 0.28
SPG7-207ENST00000563218 SRCIN1Q9C0H9 1055 aa16.81■□□□□ 0.28
SPG7-207ENST00000563218 POTEFA5A3E0 1075 aa16.8■□□□□ 0.28
SPG7-207ENST00000563218 TCP10L2B9ZVM9 353 aa16.8■□□□□ 0.28
SPG7-207ENST00000563218 ALDH1L1O75891 902 aa16.8■□□□□ 0.28
SPG7-207ENST00000563218 HIBADHP31937 336 aaKnown RBP16.8■□□□□ 0.28
SPG7-207ENST00000563218 UBE4AQ14139 1066 aa16.8■□□□□ 0.28
SPG7-207ENST00000563218 LRRC24Q50LG9 513 aa16.8■□□□□ 0.28
SPG7-207ENST00000563218 OPTNQ96CV9 577 aa16.8■□□□□ 0.28
SPG7-207ENST00000563218 TMEM39BQ9GZU3 492 aa16.8■□□□□ 0.28
SPG7-207ENST00000563218 SUPT16HQ9Y5B9 1047 aaKnown RBP16.8■□□□□ 0.28
SPG7-207ENST00000563218 DOCK2Q92608 1830 aa16.8■□□□□ 0.28
SPG7-207ENST00000563218 CRKP46108 304 aa16.79■□□□□ 0.28
SPG7-207ENST00000563218 INHBEP58166 350 aa16.79■□□□□ 0.28
SPG7-207ENST00000563218 CHAF1AQ13111 956 aaPredicted RBP16.79■□□□□ 0.28
SPG7-207ENST00000563218 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.79■□□□□ 0.28
SPG7-207ENST00000563218 DZIP1LQ8IYY4 767 aaKnown RBP16.79■□□□□ 0.28
SPG7-207ENST00000563218 ANKRD13AQ8IZ07 590 aa16.79■□□□□ 0.28
SPG7-207ENST00000563218 BICC1Q9H694 974 aaKnown RBP16.79■□□□□ 0.28
SPG7-207ENST00000563218 RIPOR2Q9Y4F9 1068 aa16.79■□□□□ 0.28
SPG7-207ENST00000563218 GTF3C3Q9Y5Q9 886 aa16.79■□□□□ 0.28
SPG7-207ENST00000563218 MGAMO43451 1857 aa16.79■□□□□ 0.28
SPG7-207ENST00000563218 MYH2Q9UKX2 1941 aa16.78■□□□□ 0.28
SPG7-207ENST00000563218 NEFLP07196 543 aa16.78■□□□□ 0.28
SPG7-207ENST00000563218 CACNB3P54284 484 aa16.78■□□□□ 0.28
SPG7-207ENST00000563218 ANKRD44Q8N8A2 993 aa16.78■□□□□ 0.28
SPG7-207ENST00000563218 KLHDC4Q8TBB5 520 aa16.78■□□□□ 0.28
SPG7-207ENST00000563218 GCC1Q96CN9 775 aa16.78■□□□□ 0.28
SPG7-207ENST00000563218 MS4A4AQ96JQ5 239 aa16.78■□□□□ 0.28
SPG7-207ENST00000563218 SERPINA10Q9UK55 444 aa16.78■□□□□ 0.28
SPG7-207ENST00000563218 RCAN3Q9UKA8 241 aa16.78■□□□□ 0.28
SPG7-207ENST00000563218 UTYO14607 1347 aa16.77■□□□□ 0.28
SPG7-207ENST00000563218 TESPA1A2RU30 521 aaPredicted RBP16.77■□□□□ 0.28
SPG7-207ENST00000563218 BRI3BPQ8WY22 251 aa16.77■□□□□ 0.28
SPG7-207ENST00000563218 PTPRFP10586 1907 aa16.76■□□□□ 0.27
SPG7-207ENST00000563218 UNCXA6NJT0 531 aa16.76■□□□□ 0.27
SPG7-207ENST00000563218 TNFAIP1Q13829 316 aa16.76■□□□□ 0.27
SPG7-207ENST00000563218 VGLL4Q14135 290 aa16.76■□□□□ 0.27
SPG7-207ENST00000563218 FBXO33Q7Z6M2 555 aa16.76■□□□□ 0.27
SPG7-207ENST00000563218 VGLL2Q8N8G2 317 aa16.76■□□□□ 0.27
SPG7-207ENST00000563218 PTPN22Q9Y2R2 807 aa16.76■□□□□ 0.27
SPG7-207ENST00000563218 MROH5Q6ZUA9 1318 aa16.75■□□□□ 0.27
SPG7-207ENST00000563218 RABL6Q3YEC7 729 aaPredicted RBP16.75■□□□□ 0.27
SPG7-207ENST00000563218 MRPL50Q8N5N7 158 aaKnown RBP16.75■□□□□ 0.27
SPG7-207ENST00000563218 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.75■□□□□ 0.27
SPG7-207ENST00000563218 ERO1AQ96HE7 468 aa16.75■□□□□ 0.27
SPG7-207ENST00000563218 CCL15-CCL14A0A0B4J2E2 113 aa16.74■□□□□ 0.27
SPG7-207ENST00000563218 SP3Q02447 781 aa16.74■□□□□ 0.27
SPG7-207ENST00000563218 CCL15Q16663 113 aa16.74■□□□□ 0.27
SPG7-207ENST00000563218 METTL24Q5JXM2 366 aa16.74■□□□□ 0.27
SPG7-207ENST00000563218 OTUD5Q96G74 571 aa16.74■□□□□ 0.27
SPG7-207ENST00000563218 EFCC1Q9HA90 598 aa16.74■□□□□ 0.27
SPG7-207ENST00000563218 PHIPQ8WWQ0 1821 aa16.74■□□□□ 0.27
SPG7-207ENST00000563218 BCAMP50895 628 aa16.73■□□□□ 0.27
SPG7-207ENST00000563218 FAM43AQ8N2R8 423 aa16.73■□□□□ 0.27
SPG7-207ENST00000563218 SNCAIPQ9Y6H5 919 aa16.73■□□□□ 0.27
SPG7-207ENST00000563218 EN2P19622 333 aaPredicted RBP16.72■□□□□ 0.27
SPG7-207ENST00000563218 MAP3K9P80192 1104 aa16.72■□□□□ 0.27
SPG7-207ENST00000563218 TAF1CQ15572 869 aaPredicted RBP16.72■□□□□ 0.27
SPG7-207ENST00000563218 OTUD7BQ6GQQ9 843 aa16.72■□□□□ 0.27
SPG7-207ENST00000563218 VPS37DQ86XT2 251 aa16.72■□□□□ 0.27
SPG7-207ENST00000563218 PDE8BO95263 885 aa16.71■□□□□ 0.27
SPG7-207ENST00000563218 ZKSCAN4Q969J2 545 aaPredicted RBP16.71■□□□□ 0.27
SPG7-207ENST00000563218 ARMC5Q96C12 935 aa16.71■□□□□ 0.27
SPG7-207ENST00000563218 ARHGAP39Q9C0H5 1083 aa16.71■□□□□ 0.27
SPG7-207ENST00000563218 PTCH2Q9Y6C5 1203 aa16.71■□□□□ 0.27
SPG7-207ENST00000563218 ATAD5Q96QE3 1844 aa16.7■□□□□ 0.26
SPG7-207ENST00000563218 DOCK1Q14185 1865 aa16.7■□□□□ 0.26
SPG7-207ENST00000563218 FRAT2O75474 233 aaPredicted RBP16.7■□□□□ 0.26
SPG7-207ENST00000563218 ECM2O94769 699 aaPredicted RBP16.7■□□□□ 0.26
SPG7-207ENST00000563218 FGFR2P21802 821 aa16.7■□□□□ 0.26
SPG7-207ENST00000563218 TNNI2P48788 182 aa16.7■□□□□ 0.26
SPG7-207ENST00000563218 HABP4Q5JVS0 413 aaKnown RBP16.7■□□□□ 0.26
SPG7-207ENST00000563218 APOBEC3HQ6NTF7 200 aaKnown RBP16.7■□□□□ 0.26
SPG7-207ENST00000563218 TEKT1Q969V4 418 aa16.7■□□□□ 0.26
SPG7-207ENST00000563218 CSADQ9Y600 493 aa16.7■□□□□ 0.26
SPG7-207ENST00000563218 SPDYE5A6NIY4 337 aa16.69■□□□□ 0.26
SPG7-207ENST00000563218 CT47B1P0C2W7 299 aaPredicted RBP16.69■□□□□ 0.26
SPG7-207ENST00000563218 RFX5P48382 616 aaPredicted RBP16.69■□□□□ 0.26
SPG7-207ENST00000563218 GTF2A2P52657 109 aa16.69■□□□□ 0.26
SPG7-207ENST00000563218 CAVIN4Q5BKX8 364 aa16.69■□□□□ 0.26
SPG7-207ENST00000563218 INTS3Q68E01 1043 aaKnown RBP16.69■□□□□ 0.26
SPG7-207ENST00000563218 TBC1D22AQ8WUA7 517 aa16.69■□□□□ 0.26
SPG7-207ENST00000563218 SSH1Q8WYL5 1049 aa16.69■□□□□ 0.26
SPG7-207ENST00000563218 ZDHHC15Q96MV8 337 aa16.69■□□□□ 0.26
SPG7-207ENST00000563218 WRNIP1Q96S55 665 aa16.69■□□□□ 0.26
SPG7-207ENST00000563218 USP44Q9H0E7 712 aa16.69■□□□□ 0.26
SPG7-207ENST00000563218 RPAP1Q9BWH6 1393 aaPredicted RBP16.68■□□□□ 0.26
SPG7-207ENST00000563218 HDLBPQ00341 1268 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms