RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 IQSEC3Q9UPP2 1182 aaPredicted RBP21.87■■□□□ 1.09
CRTC3-208ENST00000560098 FRAT2O75474 233 aaPredicted RBP21.86■■□□□ 1.09
CRTC3-208ENST00000560098 TBC1D22AQ8WUA7 517 aa21.86■■□□□ 1.09
CRTC3-208ENST00000560098 USP44Q9H0E7 712 aa21.86■■□□□ 1.09
CRTC3-208ENST00000560098 ARAP2Q8WZ64 1704 aa21.85■■□□□ 1.09
CRTC3-208ENST00000560098 GJA5P36382 358 aa21.85■■□□□ 1.09
CRTC3-208ENST00000560098 TNNI2P48788 182 aa21.85■■□□□ 1.09
CRTC3-208ENST00000560098 CHAF1AQ13111 956 aaPredicted RBP21.85■■□□□ 1.09
CRTC3-208ENST00000560098 GRIK5Q16478 980 aa21.85■■□□□ 1.09
CRTC3-208ENST00000560098 KLHDC4Q8TBB5 520 aa21.85■■□□□ 1.09
CRTC3-208ENST00000560098 TEPSINQ96N21 525 aa21.85■■□□□ 1.09
CRTC3-208ENST00000560098 TCP10L2B9ZVM9 353 aa21.84■■□□□ 1.09
CRTC3-208ENST00000560098 SLC34A2O95436 690 aa21.84■■□□□ 1.09
CRTC3-208ENST00000560098 HDLBPQ00341 1268 aaKnown RBP21.84■■□□□ 1.09
CRTC3-208ENST00000560098 OTUD7BQ6GQQ9 843 aa21.84■■□□□ 1.09
CRTC3-208ENST00000560098 CDAN1Q8IWY9 1227 aa21.84■■□□□ 1.09
CRTC3-208ENST00000560098 SLFN5Q08AF3 891 aa21.83■■□□□ 1.09
CRTC3-208ENST00000560098 TMEM39BQ9GZU3 492 aa21.83■■□□□ 1.09
CRTC3-208ENST00000560098 ELP3Q9H9T3 547 aa21.83■■□□□ 1.09
CRTC3-208ENST00000560098 LAMB1P07942 1786 aa21.83■■□□□ 1.08
CRTC3-208ENST00000560098 TESPA1A2RU30 521 aaPredicted RBP21.82■■□□□ 1.08
CRTC3-208ENST00000560098 BCAMP50895 628 aa21.82■■□□□ 1.08
CRTC3-208ENST00000560098 OPTNQ96CV9 577 aa21.82■■□□□ 1.08
CRTC3-208ENST00000560098 PUM3Q15397 648 aaKnown RBP21.81■■□□□ 1.08
CRTC3-208ENST00000560098 ALDH1L2Q3SY69 923 aa21.81■■□□□ 1.08
CRTC3-208ENST00000560098 TEKT1Q969V4 418 aa21.81■■□□□ 1.08
CRTC3-208ENST00000560098 KIF16BQ96L93 1317 aa21.81■■□□□ 1.08
CRTC3-208ENST00000560098 IFIT1P09914 478 aaKnown RBP21.8■■□□□ 1.08
CRTC3-208ENST00000560098 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.8■■□□□ 1.08
CRTC3-208ENST00000560098 PTPN18Q99952 460 aa21.8■■□□□ 1.08
CRTC3-208ENST00000560098 TRIM17Q9Y577 477 aa21.8■■□□□ 1.08
CRTC3-208ENST00000560098 FGFR2P21802 821 aa21.8■■□□□ 1.08
CRTC3-208ENST00000560098 CRHR2Q13324 411 aa21.8■■□□□ 1.08
CRTC3-208ENST00000560098 ZDHHC15Q96MV8 337 aa21.8■■□□□ 1.08
CRTC3-208ENST00000560098 MRIQ9BWK5 157 aa21.8■■□□□ 1.08
CRTC3-208ENST00000560098 SUGT1Q9Y2Z0 365 aa21.8■■□□□ 1.08
CRTC3-208ENST00000560098 RFX5P48382 616 aaPredicted RBP21.79■■□□□ 1.08
CRTC3-208ENST00000560098 MAP3K9P80192 1104 aa21.79■■□□□ 1.08
CRTC3-208ENST00000560098 VGLL4Q14135 290 aa21.79■■□□□ 1.08
CRTC3-208ENST00000560098 OTOP1Q7RTM1 612 aa21.79■■□□□ 1.08
CRTC3-208ENST00000560098 ERO1AQ96HE7 468 aa21.79■■□□□ 1.08
CRTC3-208ENST00000560098 OTOFQ9HC10 1997 aa21.78■■□□□ 1.08
CRTC3-208ENST00000560098 EYA2O00167 538 aa21.78■■□□□ 1.08
CRTC3-208ENST00000560098 CACNB3P54284 484 aa21.78■■□□□ 1.08
CRTC3-208ENST00000560098 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.78■■□□□ 1.08
CRTC3-208ENST00000560098 CDCA7LQ96GN5 454 aa21.78■■□□□ 1.08
CRTC3-208ENST00000560098 MS4A4AQ96JQ5 239 aa21.78■■□□□ 1.08
CRTC3-208ENST00000560098 SMC4Q9NTJ3 1288 aa21.78■■□□□ 1.08
CRTC3-208ENST00000560098 MAST3O60307 1309 aa21.77■■□□□ 1.08
CRTC3-208ENST00000560098 APOBEC3HQ6NTF7 200 aaKnown RBP21.77■■□□□ 1.08
CRTC3-208ENST00000560098 CNKSR2Q8WXI2 1034 aa21.77■■□□□ 1.08
CRTC3-208ENST00000560098 LPIN2Q92539 896 aa21.77■■□□□ 1.08
CRTC3-208ENST00000560098 TMOD2Q9NZR1 351 aa21.77■■□□□ 1.08
CRTC3-208ENST00000560098 CSADQ9Y600 493 aa21.77■■□□□ 1.08
CRTC3-208ENST00000560098 HTTP42858 3142 aa21.77■■□□□ 1.08
CRTC3-208ENST00000560098 SLC5A1P13866 664 aa21.76■■□□□ 1.07
CRTC3-208ENST00000560098 FAM83AQ86UY5 434 aa21.76■■□□□ 1.07
CRTC3-208ENST00000560098 CD99L2Q8TCZ2 262 aa21.76■■□□□ 1.07
CRTC3-208ENST00000560098 GTF2A2P52657 109 aa21.75■■□□□ 1.07
CRTC3-208ENST00000560098 SP3Q02447 781 aa21.75■■□□□ 1.07
CRTC3-208ENST00000560098 PDE4DIPQ5VU43 2346 aa21.75■■□□□ 1.07
CRTC3-208ENST00000560098 FKBP1CQ5VVH2 108 aa21.75■■□□□ 1.07
CRTC3-208ENST00000560098 BRI3BPQ8WY22 251 aa21.75■■□□□ 1.07
CRTC3-208ENST00000560098 HHIPL2Q6UWX4 724 aa21.74■■□□□ 1.07
CRTC3-208ENST00000560098 ATG9AQ7Z3C6 839 aa21.74■■□□□ 1.07
CRTC3-208ENST00000560098 TRMT2AQ8IZ69 625 aaKnown RBP21.74■■□□□ 1.07
CRTC3-208ENST00000560098 WDR66Q8TBY9 1149 aa21.74■■□□□ 1.07
CRTC3-208ENST00000560098 HOOK2Q96ED9 719 aa21.74■■□□□ 1.07
CRTC3-208ENST00000560098 OTUD5Q96G74 571 aa21.74■■□□□ 1.07
CRTC3-208ENST00000560098 CCL15-CCL14A0A0B4J2E2 113 aa21.73■■□□□ 1.07
CRTC3-208ENST00000560098 UBTFL1P0CB47 393 aaPredicted RBP21.73■■□□□ 1.07
CRTC3-208ENST00000560098 CCL15Q16663 113 aa21.73■■□□□ 1.07
CRTC3-208ENST00000560098 PRPF38BQ5VTL8 546 aaKnown RBP21.73■■□□□ 1.07
CRTC3-208ENST00000560098 PTPN22Q9Y2R2 807 aa21.73■■□□□ 1.07
CRTC3-208ENST00000560098 SPDYE5A6NIY4 337 aa21.72■■□□□ 1.07
CRTC3-208ENST00000560098 INTS3Q68E01 1043 aaKnown RBP21.72■■□□□ 1.07
CRTC3-208ENST00000560098 WRNIP1Q96S55 665 aa21.72■■□□□ 1.07
CRTC3-208ENST00000560098 EFCC1Q9HA90 598 aa21.72■■□□□ 1.07
CRTC3-208ENST00000560098 FBXO3Q9UK99 471 aa21.72■■□□□ 1.07
CRTC3-208ENST00000560098 CIAO1O76071 339 aa21.72■■□□□ 1.07
CRTC3-208ENST00000560098 CT47B1P0C2W7 299 aaPredicted RBP21.72■■□□□ 1.07
CRTC3-208ENST00000560098 TAF1CQ15572 869 aaPredicted RBP21.72■■□□□ 1.07
CRTC3-208ENST00000560098 SIL1Q9H173 461 aa21.72■■□□□ 1.07
CRTC3-208ENST00000560098 ZFYVE28Q9HCC9 887 aa21.72■■□□□ 1.07
CRTC3-208ENST00000560098 NOB1Q9ULX3 412 aaKnown RBP21.72■■□□□ 1.07
CRTC3-208ENST00000560098 SNCAIPQ9Y6H5 919 aa21.72■■□□□ 1.07
CRTC3-208ENST00000560098 ERO1BQ86YB8 467 aa21.71■■□□□ 1.07
CRTC3-208ENST00000560098 ZKSCAN4Q969J2 545 aaPredicted RBP21.71■■□□□ 1.07
CRTC3-208ENST00000560098 CEP126Q9P2H0 1117 aa21.71■■□□□ 1.07
CRTC3-208ENST00000560098 RPAP1Q9BWH6 1393 aaPredicted RBP21.7■■□□□ 1.07
CRTC3-208ENST00000560098 ATP2B3Q16720 1220 aa21.7■■□□□ 1.06
CRTC3-208ENST00000560098 DCAF15Q66K64 600 aa21.7■■□□□ 1.06
CRTC3-208ENST00000560098 FAM43AQ8N2R8 423 aa21.7■■□□□ 1.06
CRTC3-208ENST00000560098 GNL3LQ9NVN8 582 aaKnown RBP21.7■■□□□ 1.06
CRTC3-208ENST00000560098 CENPFP49454 3210 aa21.69■■□□□ 1.06
CRTC3-208ENST00000560098 CAP1Q01518 475 aa21.69■■□□□ 1.06
CRTC3-208ENST00000560098 API5Q9BZZ5 524 aaKnown RBP21.69■■□□□ 1.06
CRTC3-208ENST00000560098 HDAC5Q9UQL6 1122 aa21.69■■□□□ 1.06
CRTC3-208ENST00000560098 CETPP11597 493 aa21.68■■□□□ 1.06
CRTC3-208ENST00000560098 FAM151AQ8WW52 585 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms