RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 EVI5LQ96CN4 794 aa11.41□□□□□ -0.58
HERC1-206ENST00000559996 MXD3Q9BW11 206 aa11.41□□□□□ -0.58
HERC1-206ENST00000559996 IL25Q9H293 177 aa11.41□□□□□ -0.58
HERC1-206ENST00000559996 GNL3LQ9NVN8 582 aaKnown RBP11.41□□□□□ -0.58
HERC1-206ENST00000559996 JAG2Q9Y219 1238 aa11.41□□□□□ -0.58
HERC1-206ENST00000559996 UTRNP46939 3433 aa11.41□□□□□ -0.58
HERC1-206ENST00000559996 FZD9O00144 591 aa11.4□□□□□ -0.58
HERC1-206ENST00000559996 NUBP1P53384 320 aa11.4□□□□□ -0.58
HERC1-206ENST00000559996 GTF2IP78347 998 aa11.4□□□□□ -0.58
HERC1-206ENST00000559996 C8orf34Q49A92 452 aa11.4□□□□□ -0.58
HERC1-206ENST00000559996 DACT2Q5SW24 774 aa11.4□□□□□ -0.58
HERC1-206ENST00000559996 TTLL5Q6EMB2 1281 aa11.4□□□□□ -0.58
HERC1-206ENST00000559996 LARGE2Q8N3Y3 721 aa11.4□□□□□ -0.58
HERC1-206ENST00000559996 RILPL2Q969X0 211 aa11.4□□□□□ -0.58
HERC1-206ENST00000559996 GMLQ99445 158 aa11.4□□□□□ -0.58
HERC1-206ENST00000559996 DOCK2Q92608 1830 aa11.39□□□□□ -0.59
HERC1-206ENST00000559996 TCRBV5S4A2TA0A5A2 114 aa11.39□□□□□ -0.59
HERC1-206ENST00000559996 TRIM6-TRIM34B2RNG4 842 aa11.39□□□□□ -0.59
HERC1-206ENST00000559996 VIL1P09327 827 aaKnown RBP11.39□□□□□ -0.59
HERC1-206ENST00000559996 CHMLP26374 656 aa11.39□□□□□ -0.59
HERC1-206ENST00000559996 PRDX5P30044 214 aa11.39□□□□□ -0.59
HERC1-206ENST00000559996 FKBP1AP62942 108 aaKnown RBP11.39□□□□□ -0.59
HERC1-206ENST00000559996 CXCL9Q07325 125 aa11.39□□□□□ -0.59
HERC1-206ENST00000559996 CHAF1AQ13111 956 aaPredicted RBP11.39□□□□□ -0.59
HERC1-206ENST00000559996 STRIP1Q5VSL9 837 aa11.39□□□□□ -0.59
HERC1-206ENST00000559996 ZNRF3Q9ULT6 936 aa11.39□□□□□ -0.59
HERC1-206ENST00000559996 PCDHB13Q9Y5F0 798 aa11.39□□□□□ -0.59
HERC1-206ENST00000559996 DICER1Q9UPY3 1922 aaKnown RBP11.39□□□□□ -0.59
HERC1-206ENST00000559996 PSME4Q14997 1843 aa11.38□□□□□ -0.59
HERC1-206ENST00000559996 TTLL13PA6NNM8 815 aa11.38□□□□□ -0.59
HERC1-206ENST00000559996 LMNB1P20700 586 aa11.38□□□□□ -0.59
HERC1-206ENST00000559996 GPR162Q16538 588 aa11.38□□□□□ -0.59
HERC1-206ENST00000559996 MAMSTRQ6ZN01 415 aa11.38□□□□□ -0.59
HERC1-206ENST00000559996 TICAM2Q86XR7 235 aa11.38□□□□□ -0.59
HERC1-206ENST00000559996 CNTROBQ8N137 903 aa11.38□□□□□ -0.59
HERC1-206ENST00000559996 WDR66Q8TBY9 1149 aa11.38□□□□□ -0.59
HERC1-206ENST00000559996 NSUN4Q96CB9 384 aaKnown RBP11.38□□□□□ -0.59
HERC1-206ENST00000559996 MYH13Q9UKX3 1938 aa11.37□□□□□ -0.59
HERC1-206ENST00000559996 USP17L3A6NCW0 530 aa11.37□□□□□ -0.59
HERC1-206ENST00000559996 USP17L4A6NCW7 530 aa11.37□□□□□ -0.59
HERC1-206ENST00000559996 PSMD14O00487 310 aa11.37□□□□□ -0.59
HERC1-206ENST00000559996 RAD17O75943 681 aa11.37□□□□□ -0.59
HERC1-206ENST00000559996 SEC24BO95487 1268 aa11.37□□□□□ -0.59
HERC1-206ENST00000559996 ADD2P35612 726 aa11.37□□□□□ -0.59
HERC1-206ENST00000559996 TTF1Q15361 905 aaPredicted RBP11.37□□□□□ -0.59
HERC1-206ENST00000559996 MFSD14BQ5SR56 506 aa11.37□□□□□ -0.59
HERC1-206ENST00000559996 USP17L1Q7RTZ2 530 aa11.37□□□□□ -0.59
HERC1-206ENST00000559996 ADGRA1Q86SQ6 560 aa11.37□□□□□ -0.59
HERC1-206ENST00000559996 OSBP2Q969R2 916 aa11.37□□□□□ -0.59
HERC1-206ENST00000559996 FAM227BQ96M60 508 aa11.37□□□□□ -0.59
HERC1-206ENST00000559996 SEC62Q99442 399 aaKnown RBP11.37□□□□□ -0.59
HERC1-206ENST00000559996 POTEFA5A3E0 1075 aa11.36□□□□□ -0.59
HERC1-206ENST00000559996 POTEMA6NI47 508 aa11.36□□□□□ -0.59
HERC1-206ENST00000559996 RNF113AO15541 343 aaKnown RBP11.36□□□□□ -0.59
HERC1-206ENST00000559996 GRIN3BO60391 1043 aa11.36□□□□□ -0.59
HERC1-206ENST00000559996 FRAT2O75474 233 aaPredicted RBP11.36□□□□□ -0.59
HERC1-206ENST00000559996 PDE6AP16499 860 aa11.36□□□□□ -0.59
HERC1-206ENST00000559996 MECOMQ03112 1051 aa11.36□□□□□ -0.59
HERC1-206ENST00000559996 ZMYM1Q5SVZ6 1142 aa11.36□□□□□ -0.59
HERC1-206ENST00000559996 NIM1KQ8IY84 436 aa11.36□□□□□ -0.59
HERC1-206ENST00000559996 FAM212AQ96EL1 285 aa11.36□□□□□ -0.59
HERC1-206ENST00000559996 FAM163AQ96GL9 167 aaPredicted RBP11.36□□□□□ -0.59
HERC1-206ENST00000559996 PUS7LQ9H0K6 701 aaKnown RBP11.36□□□□□ -0.59
HERC1-206ENST00000559996 SCUBE2Q9NQ36 999 aa11.36□□□□□ -0.59
HERC1-206ENST00000559996 ABCF2Q9UG63 623 aa11.36□□□□□ -0.59
HERC1-206ENST00000559996 ZNF541Q9H0D2 1346 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 AK9Q5TCS8 1911 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 A0A0D9SFI3 127 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 G3V3G9 751 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 FOXP2O15409 715 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 IGSF3O75054 1194 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 IDH1O75874 414 aaKnown RBP11.35□□□□□ -0.59
HERC1-206ENST00000559996 NMIQ13287 307 aaPredicted RBP11.35□□□□□ -0.59
HERC1-206ENST00000559996 UBE3CQ15386 1083 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 SLC9C2Q5TAH2 1124 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 DCAF8Q5TAQ9 597 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 C9orf131Q5VYM1 1079 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 RSBN1LQ6PCB5 846 aaPredicted RBP11.35□□□□□ -0.59
HERC1-206ENST00000559996 ERICH6Q7L0X2 663 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 TBC1D22AQ8WUA7 517 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 JDP2Q8WYK2 163 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 FSD1Q9BTV5 496 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 MRIQ9BWK5 157 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 SUGT1Q9Y2Z0 365 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 RFX7Q2KHR2 1363 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 ZNF532Q9HCE3 1301 aa11.35□□□□□ -0.59
HERC1-206ENST00000559996 CDC45O75419 566 aa11.34□□□□□ -0.59
HERC1-206ENST00000559996 LDHBP07195 334 aaKnown RBP11.34□□□□□ -0.59
HERC1-206ENST00000559996 CIAPIN1Q6FI81 312 aa11.34□□□□□ -0.59
HERC1-206ENST00000559996 ZNF589Q86UQ0 364 aaPredicted RBP11.34□□□□□ -0.59
HERC1-206ENST00000559996 MAGEB6Q8N7X4 407 aa11.34□□□□□ -0.59
HERC1-206ENST00000559996 RIOK1Q9BRS2 568 aaKnown RBP11.34□□□□□ -0.59
HERC1-206ENST00000559996 ESYT1Q9BSJ8 1104 aa11.34□□□□□ -0.59
HERC1-206ENST00000559996 BACH2Q9BYV9 841 aa11.34□□□□□ -0.59
HERC1-206ENST00000559996 LRP2BPQ9P2M1 347 aa11.34□□□□□ -0.59
HERC1-206ENST00000559996 PCDHAC2Q9Y5I4 1007 aa11.34□□□□□ -0.59
HERC1-206ENST00000559996 MYH7P12883 1935 aa11.34□□□□□ -0.59
HERC1-206ENST00000559996 SHTN1A0MZ66 631 aa11.33□□□□□ -0.6
HERC1-206ENST00000559996 M0R2C6 588 aa11.33□□□□□ -0.6
HERC1-206ENST00000559996 SGSM2O43147 1006 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms