RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 ATP2B3Q16720 1220 aa21.2■□□□□ 0.98
LRRC28-210ENST00000558879 CSRNP1Q96S65 589 aa21.2■□□□□ 0.98
LRRC28-210ENST00000558879 VEZTQ9HBM0 779 aa21.2■□□□□ 0.98
LRRC28-210ENST00000558879 RBM5P52756 815 aaKnown RBP eCLIP21.19■□□□□ 0.98
LRRC28-210ENST00000558879 TTLL12Q14166 644 aaPredicted RBP21.19■□□□□ 0.98
LRRC28-210ENST00000558879 LDLRAD1Q5T700 205 aa21.19■□□□□ 0.98
LRRC28-210ENST00000558879 ARMC9Q7Z3E5 817 aa21.19■□□□□ 0.98
LRRC28-210ENST00000558879 REM2Q8IYK8 340 aaPredicted RBP21.19■□□□□ 0.98
LRRC28-210ENST00000558879 DZIP1LQ8IYY4 767 aaKnown RBP21.19■□□□□ 0.98
LRRC28-210ENST00000558879 FRAT1Q92837 279 aaPredicted RBP21.19■□□□□ 0.98
LRRC28-210ENST00000558879 ZNF70Q9UC06 446 aaPredicted RBP21.19■□□□□ 0.98
LRRC28-210ENST00000558879 SUGT1Q9Y2Z0 365 aa21.19■□□□□ 0.98
LRRC28-210ENST00000558879 MAST2Q6P0Q8 1798 aa21.18■□□□□ 0.98
LRRC28-210ENST00000558879 FRAT2O75474 233 aaPredicted RBP21.18■□□□□ 0.98
LRRC28-210ENST00000558879 TNFAIP1Q13829 316 aa21.18■□□□□ 0.98
LRRC28-210ENST00000558879 ZKSCAN2Q63HK3 967 aa21.18■□□□□ 0.98
LRRC28-210ENST00000558879 TDRD3Q9H7E2 651 aaKnown RBP21.18■□□□□ 0.98
LRRC28-210ENST00000558879 CEP126Q9P2H0 1117 aa21.18■□□□□ 0.98
LRRC28-210ENST00000558879 MAST3O60307 1309 aa21.18■□□□□ 0.98
LRRC28-210ENST00000558879 MYO5AQ9Y4I1 1855 aaKnown RBP21.18■□□□□ 0.98
LRRC28-210ENST00000558879 CLUAP1Q96AJ1 413 aa21.17■□□□□ 0.98
LRRC28-210ENST00000558879 MRIQ9BWK5 157 aa21.17■□□□□ 0.98
LRRC28-210ENST00000558879 RNF186Q9NXI6 227 aa21.17■□□□□ 0.98
LRRC28-210ENST00000558879 ANGEL1Q9UNK9 670 aaKnown RBP21.17■□□□□ 0.98
LRRC28-210ENST00000558879 FZD1Q9UP38 647 aa21.17■□□□□ 0.98
LRRC28-210ENST00000558879 SRGAP3O43295 1099 aa21.16■□□□□ 0.98
LRRC28-210ENST00000558879 PRKG1Q13976 671 aa21.16■□□□□ 0.98
LRRC28-210ENST00000558879 RASA3Q14644 834 aa21.16■□□□□ 0.98
LRRC28-210ENST00000558879 TMEM57Q8N5G2 664 aa21.16■□□□□ 0.98
LRRC28-210ENST00000558879 TEKT1Q969V4 418 aa21.16■□□□□ 0.98
LRRC28-210ENST00000558879 ZDHHC15Q96MV8 337 aa21.16■□□□□ 0.98
LRRC28-210ENST00000558879 SALL1Q9NSC2 1324 aa21.15■□□□□ 0.98
LRRC28-210ENST00000558879 NBPF12Q5TAG4 269 aaPredicted RBP21.15■□□□□ 0.98
LRRC28-210ENST00000558879 WDR66Q8TBY9 1149 aa21.15■□□□□ 0.98
LRRC28-210ENST00000558879 TEPSINQ96N21 525 aa21.15■□□□□ 0.98
LRRC28-210ENST00000558879 CDK5RAP2Q96SN8 1893 aa21.15■□□□□ 0.98
LRRC28-210ENST00000558879 RPAP1Q9BWH6 1393 aaPredicted RBP21.14■□□□□ 0.98
LRRC28-210ENST00000558879 UNCXA6NJT0 531 aa21.14■□□□□ 0.97
LRRC28-210ENST00000558879 CAPN15O75808 1086 aa21.14■□□□□ 0.97
LRRC28-210ENST00000558879 GNAI2P04899 355 aa21.14■□□□□ 0.97
LRRC28-210ENST00000558879 PHKA1P46020 1223 aa21.14■□□□□ 0.97
LRRC28-210ENST00000558879 SUPT20HL1Q3ZLR7 823 aa21.14■□□□□ 0.97
LRRC28-210ENST00000558879 SEMA3EO15041 775 aa21.13■□□□□ 0.97
LRRC28-210ENST00000558879 PPP1R12BO60237 982 aaPredicted RBP21.13■□□□□ 0.97
LRRC28-210ENST00000558879 CDAN1Q8IWY9 1227 aa21.13■□□□□ 0.97
LRRC28-210ENST00000558879 PDS5AQ29RF7 1337 aaKnown RBP21.12■□□□□ 0.97
LRRC28-210ENST00000558879 PNMA6EA0A0J9YXQ4 647 aa21.12■□□□□ 0.97
LRRC28-210ENST00000558879 TRPA1O75762 1119 aa21.12■□□□□ 0.97
LRRC28-210ENST00000558879 ADORA1P30542 326 aa21.12■□□□□ 0.97
LRRC28-210ENST00000558879 TM4SF4P48230 202 aa21.12■□□□□ 0.97
LRRC28-210ENST00000558879 SPRYD7Q5W111 196 aa21.12■□□□□ 0.97
LRRC28-210ENST00000558879 APOBEC3HQ6NTF7 200 aaKnown RBP21.12■□□□□ 0.97
LRRC28-210ENST00000558879 HHIPL2Q6UWX4 724 aa21.12■□□□□ 0.97
LRRC28-210ENST00000558879 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.12■□□□□ 0.97
LRRC28-210ENST00000558879 FOCADQ5VW36 1801 aa21.12■□□□□ 0.97
LRRC28-210ENST00000558879 TCP10L2B9ZVM9 353 aa21.11■□□□□ 0.97
LRRC28-210ENST00000558879 USP2O75604 605 aaPredicted RBP21.11■□□□□ 0.97
LRRC28-210ENST00000558879 PRDX5P30044 214 aa21.11■□□□□ 0.97
LRRC28-210ENST00000558879 CCDC102BQ68D86 513 aa21.11■□□□□ 0.97
LRRC28-210ENST00000558879 ABHD8Q96I13 439 aa21.11■□□□□ 0.97
LRRC28-210ENST00000558879 CLMNQ96JQ2 1002 aa21.11■□□□□ 0.97
LRRC28-210ENST00000558879 DENND2AQ9ULE3 1009 aa21.11■□□□□ 0.97
LRRC28-210ENST00000558879 A0A1B0GUL7 405 aa21.1■□□□□ 0.97
LRRC28-210ENST00000558879 ZBTB48P10074 688 aaPredicted RBP21.1■□□□□ 0.97
LRRC28-210ENST00000558879 TNNI2P48788 182 aa21.1■□□□□ 0.97
LRRC28-210ENST00000558879 TFCP2Q12800 502 aa21.1■□□□□ 0.97
LRRC28-210ENST00000558879 FKBP1CQ5VVH2 108 aa21.1■□□□□ 0.97
LRRC28-210ENST00000558879 TMEM39BQ9GZU3 492 aa21.1■□□□□ 0.97
LRRC28-210ENST00000558879 GNL3LQ9NVN8 582 aaKnown RBP21.1■□□□□ 0.97
LRRC28-210ENST00000558879 RLBP1P12271 317 aa21.09■□□□□ 0.97
LRRC28-210ENST00000558879 IREB2P48200 963 aaKnown RBP21.09■□□□□ 0.97
LRRC28-210ENST00000558879 CACNB3P54284 484 aa21.09■□□□□ 0.97
LRRC28-210ENST00000558879 SREBF2Q12772 1141 aa21.09■□□□□ 0.97
LRRC28-210ENST00000558879 MKRN3Q13064 507 aaKnown RBP21.09■□□□□ 0.97
LRRC28-210ENST00000558879 FAM83AQ86UY5 434 aa21.09■□□□□ 0.97
LRRC28-210ENST00000558879 WNK4Q96J92 1243 aa21.09■□□□□ 0.97
LRRC28-210ENST00000558879 CFHR5Q9BXR6 569 aa21.09■□□□□ 0.97
LRRC28-210ENST00000558879 PTPRFP10586 1907 aa21.09■□□□□ 0.97
LRRC28-210ENST00000558879 RASGRF1Q13972 1273 aa21.08■□□□□ 0.97
LRRC28-210ENST00000558879 POLA2Q14181 598 aa21.08■□□□□ 0.97
LRRC28-210ENST00000558879 ANKRD13AQ8IZ07 590 aa21.08■□□□□ 0.97
LRRC28-210ENST00000558879 AKAP2Q9Y2D5 859 aa21.08■□□□□ 0.97
LRRC28-210ENST00000558879 DAGLAQ9Y4D2 1042 aa21.08■□□□□ 0.97
LRRC28-210ENST00000558879 RFX7Q2KHR2 1363 aa21.08■□□□□ 0.96
LRRC28-210ENST00000558879 DOCK1Q14185 1865 aa21.07■□□□□ 0.96
LRRC28-210ENST00000558879 TIMM10P62072 90 aa21.07■□□□□ 0.96
LRRC28-210ENST00000558879 DIXDC1Q155Q3 683 aa21.07■□□□□ 0.96
LRRC28-210ENST00000558879 FTSJ3Q8IY81 847 aaKnown RBP21.07■□□□□ 0.96
LRRC28-210ENST00000558879 XAGE2Q96GT9 111 aa21.07■□□□□ 0.96
LRRC28-210ENST00000558879 MCOLN1Q9GZU1 580 aa21.07■□□□□ 0.96
LRRC28-210ENST00000558879 TMOD2Q9NZR1 351 aa21.07■□□□□ 0.96
LRRC28-210ENST00000558879 PHIPQ8WWQ0 1821 aa21.06■□□□□ 0.96
LRRC28-210ENST00000558879 ATAD5Q96QE3 1844 aa21.06■□□□□ 0.96
LRRC28-210ENST00000558879 MANSC4A6NHS7 340 aaPredicted RBP21.06■□□□□ 0.96
LRRC28-210ENST00000558879 LDHBP07195 334 aaKnown RBP21.06■□□□□ 0.96
LRRC28-210ENST00000558879 GJA5P36382 358 aa21.06■□□□□ 0.96
LRRC28-210ENST00000558879 NOM1Q5C9Z4 860 aaKnown RBP21.06■□□□□ 0.96
LRRC28-210ENST00000558879 SSH3Q8TE77 659 aa21.06■□□□□ 0.96
LRRC28-210ENST00000558879 SLC10A4Q96EP9 437 aa21.06■□□□□ 0.96
LRRC28-210ENST00000558879 GAKO14976 1311 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms