RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 NBPF12Q5TAG4 269 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-208ENST00000558827 RASAL3Q86YV0 1011 aa15.56■□□□□ 0.08
SMAD3-208ENST00000558827 FTSJ3Q8IY81 847 aaKnown RBP15.56■□□□□ 0.08
SMAD3-208ENST00000558827 DZIP1LQ8IYY4 767 aaKnown RBP15.56■□□□□ 0.08
SMAD3-208ENST00000558827 COPRSQ9NQ92 184 aa15.56■□□□□ 0.08
SMAD3-208ENST00000558827 MMP14P50281 582 aa15.55■□□□□ 0.08
SMAD3-208ENST00000558827 RASA3Q14644 834 aa15.55■□□□□ 0.08
SMAD3-208ENST00000558827 ITPRIPQ8IWB1 547 aa15.55■□□□□ 0.08
SMAD3-208ENST00000558827 CDAN1Q8IWY9 1227 aa15.55■□□□□ 0.08
SMAD3-208ENST00000558827 PANK1Q8TE04 598 aa15.55■□□□□ 0.08
SMAD3-208ENST00000558827 PRDM10Q9NQV6 1147 aa15.55■□□□□ 0.08
SMAD3-208ENST00000558827 CASP8AP2Q9UKL3 1982 aa15.55■□□□□ 0.08
SMAD3-208ENST00000558827 TRPA1O75762 1119 aa15.54■□□□□ 0.08
SMAD3-208ENST00000558827 ARMC9Q7Z3E5 817 aa15.54■□□□□ 0.08
SMAD3-208ENST00000558827 NEUROD6Q96NK8 337 aa15.54■□□□□ 0.08
SMAD3-208ENST00000558827 CSRNP1Q96S65 589 aa15.54■□□□□ 0.08
SMAD3-208ENST00000558827 SERPINA10Q9UK55 444 aa15.54■□□□□ 0.08
SMAD3-208ENST00000558827 THSD7BQ9C0I4 1608 aa15.54■□□□□ 0.08
SMAD3-208ENST00000558827 FKBP1BP68106 108 aa15.53■□□□□ 0.08
SMAD3-208ENST00000558827 SPDYE2Q495Y8 402 aa15.53■□□□□ 0.08
SMAD3-208ENST00000558827 TBC1D22AQ8WUA7 517 aa15.53■□□□□ 0.08
SMAD3-208ENST00000558827 CLMNQ96JQ2 1002 aa15.53■□□□□ 0.08
SMAD3-208ENST00000558827 PAPPA2Q9BXP8 1791 aa15.53■□□□□ 0.08
SMAD3-208ENST00000558827 COL1A1P02452 1464 aaPredicted RBP15.52■□□□□ 0.08
SMAD3-208ENST00000558827 G3BP1Q13283 466 aaKnown RBP eCLIP15.52■□□□□ 0.08
SMAD3-208ENST00000558827 DIXDC1Q155Q3 683 aa15.52■□□□□ 0.08
SMAD3-208ENST00000558827 CCDC102BQ68D86 513 aa15.52■□□□□ 0.08
SMAD3-208ENST00000558827 TEKT1Q969V4 418 aa15.52■□□□□ 0.08
SMAD3-208ENST00000558827 XAGE2Q96GT9 111 aa15.52■□□□□ 0.08
SMAD3-208ENST00000558827 TMEM39BQ9GZU3 492 aa15.52■□□□□ 0.08
SMAD3-208ENST00000558827 FBXO3Q9UK99 471 aa15.52■□□□□ 0.08
SMAD3-208ENST00000558827 A0A1B0GUL7 405 aa15.51■□□□□ 0.07
SMAD3-208ENST00000558827 PRDX5P30044 214 aa15.51■□□□□ 0.07
SMAD3-208ENST00000558827 MTX1Q13505 466 aa15.51■□□□□ 0.07
SMAD3-208ENST00000558827 WDR66Q8TBY9 1149 aa15.51■□□□□ 0.07
SMAD3-208ENST00000558827 GNL3LQ9NVN8 582 aaKnown RBP15.51■□□□□ 0.07
SMAD3-208ENST00000558827 RNF186Q9NXI6 227 aa15.51■□□□□ 0.07
SMAD3-208ENST00000558827 ECM29Q5VYK3 1845 aa15.51■□□□□ 0.07
SMAD3-208ENST00000558827 MYH13Q9UKX3 1938 aa15.51■□□□□ 0.07
SMAD3-208ENST00000558827 SSC5DA1L4H1 1573 aa15.5■□□□□ 0.07
SMAD3-208ENST00000558827 USP2O75604 605 aaPredicted RBP15.5■□□□□ 0.07
SMAD3-208ENST00000558827 OS9Q13438 667 aaPredicted RBP15.5■□□□□ 0.07
SMAD3-208ENST00000558827 SUPT20HL1Q3ZLR7 823 aa15.5■□□□□ 0.07
SMAD3-208ENST00000558827 SLC10A4Q96EP9 437 aa15.5■□□□□ 0.07
SMAD3-208ENST00000558827 ZBTB7BO15156 539 aaPredicted RBP15.49■□□□□ 0.07
SMAD3-208ENST00000558827 PPP1R12BO60237 982 aaPredicted RBP15.49■□□□□ 0.07
SMAD3-208ENST00000558827 ATP8B2P98198 1209 aa15.49■□□□□ 0.07
SMAD3-208ENST00000558827 LDLRAD1Q5T700 205 aa15.49■□□□□ 0.07
SMAD3-208ENST00000558827 GORABQ5T7V8 394 aa15.49■□□□□ 0.07
SMAD3-208ENST00000558827 APOBEC3HQ6NTF7 200 aaKnown RBP15.49■□□□□ 0.07
SMAD3-208ENST00000558827 BCL11AQ9H165 835 aa15.49■□□□□ 0.07
SMAD3-208ENST00000558827 ABCF2Q9UG63 623 aa15.49■□□□□ 0.07
SMAD3-208ENST00000558827 ARAP2Q8WZ64 1704 aa15.48■□□□□ 0.07
SMAD3-208ENST00000558827 SURF6O75683 361 aaKnown RBP15.48■□□□□ 0.07
SMAD3-208ENST00000558827 TBC1D8O95759 1140 aa15.48■□□□□ 0.07
SMAD3-208ENST00000558827 LDHBP07195 334 aaKnown RBP15.48■□□□□ 0.07
SMAD3-208ENST00000558827 RASGRF1Q13972 1273 aa15.48■□□□□ 0.07
SMAD3-208ENST00000558827 PI16Q6UXB8 463 aa15.48■□□□□ 0.07
SMAD3-208ENST00000558827 ZDHHC15Q96MV8 337 aa15.48■□□□□ 0.07
SMAD3-208ENST00000558827 TEPSINQ96N21 525 aa15.48■□□□□ 0.07
SMAD3-208ENST00000558827 DENND2AQ9ULE3 1009 aa15.48■□□□□ 0.07
SMAD3-208ENST00000558827 AKAP2Q9Y2D5 859 aa15.48■□□□□ 0.07
SMAD3-208ENST00000558827 PPP2R3BQ9Y5P8 575 aa15.48■□□□□ 0.07
SMAD3-208ENST00000558827 AKAP11Q9UKA4 1901 aa15.48■□□□□ 0.07
SMAD3-208ENST00000558827 CA12O43570 354 aa15.47■□□□□ 0.07
SMAD3-208ENST00000558827 TNNI2P48788 182 aa15.47■□□□□ 0.07
SMAD3-208ENST00000558827 HDLBPQ00341 1268 aaKnown RBP15.47■□□□□ 0.07
SMAD3-208ENST00000558827 TCP10Q12799 353 aa15.47■□□□□ 0.07
SMAD3-208ENST00000558827 TNFAIP1Q13829 316 aa15.47■□□□□ 0.07
SMAD3-208ENST00000558827 TBC1D9Q6ZT07 1266 aa15.47■□□□□ 0.07
SMAD3-208ENST00000558827 ELP3Q9H9T3 547 aa15.47■□□□□ 0.07
SMAD3-208ENST00000558827 TMOD2Q9NZR1 351 aa15.47■□□□□ 0.07
SMAD3-208ENST00000558827 DAGLAQ9Y4D2 1042 aa15.47■□□□□ 0.07
SMAD3-208ENST00000558827 IREB2P48200 963 aaKnown RBP15.46■□□□□ 0.07
SMAD3-208ENST00000558827 POLA2Q14181 598 aa15.46■□□□□ 0.07
SMAD3-208ENST00000558827 SPRYD7Q5W111 196 aa15.46■□□□□ 0.07
SMAD3-208ENST00000558827 CDC42EP5Q6NZY7 148 aa15.46■□□□□ 0.07
SMAD3-208ENST00000558827 HHIPL2Q6UWX4 724 aa15.46■□□□□ 0.07
SMAD3-208ENST00000558827 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.07
SMAD3-208ENST00000558827 SNRKQ9NRH2 765 aa15.46■□□□□ 0.07
SMAD3-208ENST00000558827 USP40Q9NVE5 1235 aa15.46■□□□□ 0.07
SMAD3-208ENST00000558827 COG6Q9Y2V7 657 aa15.46■□□□□ 0.07
SMAD3-208ENST00000558827 MAST3O60307 1309 aa15.45■□□□□ 0.06
SMAD3-208ENST00000558827 GJA5P36382 358 aa15.45■□□□□ 0.06
SMAD3-208ENST00000558827 NFIAQ12857 509 aa15.45■□□□□ 0.06
SMAD3-208ENST00000558827 MVPQ14764 893 aaKnown RBP15.45■□□□□ 0.06
SMAD3-208ENST00000558827 MIGA2Q7L4E1 593 aa15.45■□□□□ 0.06
SMAD3-208ENST00000558827 SSH3Q8TE77 659 aa15.45■□□□□ 0.06
SMAD3-208ENST00000558827 WNK4Q96J92 1243 aa15.45■□□□□ 0.06
SMAD3-208ENST00000558827 HMG20BQ9P0W2 317 aa15.45■□□□□ 0.06
SMAD3-208ENST00000558827 RCAN3Q9UKA8 241 aa15.45■□□□□ 0.06
SMAD3-208ENST00000558827 SUGT1Q9Y2Z0 365 aa15.45■□□□□ 0.06
SMAD3-208ENST00000558827 AK9Q5TCS8 1911 aa15.45■□□□□ 0.06
SMAD3-208ENST00000558827 APBB1O00213 710 aa15.44■□□□□ 0.06
SMAD3-208ENST00000558827 DGKZQ13574 1117 aa15.44■□□□□ 0.06
SMAD3-208ENST00000558827 MAP3K11Q16584 847 aa15.44■□□□□ 0.06
SMAD3-208ENST00000558827 DZIP1Q86YF9 867 aaKnown RBP15.44■□□□□ 0.06
SMAD3-208ENST00000558827 ZFPM1Q8IX07 1006 aa15.44■□□□□ 0.06
SMAD3-208ENST00000558827 DBNDD2Q9BQY9 259 aa15.44■□□□□ 0.06
SMAD3-208ENST00000558827 MRIQ9BWK5 157 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms