RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 DNAJC2Q99543 621 aaKnown RBP21.28■■□□□ 1
TPM1-214ENST00000558544 BOLA2Q9H3K6 86 aa21.28■■□□□ 1
TPM1-214ENST00000558544 MYOZ2Q9NPC6 264 aa21.28■■□□□ 1
TPM1-214ENST00000558544 TTC41PQ6P2S7 1318 aa21.27■■□□□ 1
TPM1-214ENST00000558544 LDHBP07195 334 aaKnown RBP21.27■■□□□ 1
TPM1-214ENST00000558544 KIF4BQ2VIQ3 1234 aa21.27■■□□□ 1
TPM1-214ENST00000558544 CENPQQ7L2Z9 268 aaPredicted RBP21.27■■□□□ 1
TPM1-214ENST00000558544 SUGT1Q9Y2Z0 365 aa21.27■■□□□ 1
TPM1-214ENST00000558544 AK9Q5TCS8 1911 aa21.27■■□□□ 1
TPM1-214ENST00000558544 POTEIP0CG38 1075 aa21.26■□□□□ 0.99
TPM1-214ENST00000558544 POTEJP0CG39 1038 aa21.26■□□□□ 0.99
TPM1-214ENST00000558544 USP50Q70EL3 339 aaPredicted RBP21.26■□□□□ 0.99
TPM1-214ENST00000558544 PPP4R2Q9NY27 417 aa21.26■□□□□ 0.99
TPM1-214ENST00000558544 MAST3O60307 1309 aa21.25■□□□□ 0.99
TPM1-214ENST00000558544 SPTY2D1Q68D10 685 aaPredicted RBP21.25■□□□□ 0.99
TPM1-214ENST00000558544 ERICH6Q7L0X2 663 aa21.25■□□□□ 0.99
TPM1-214ENST00000558544 PNMA8AQ86V59 439 aaPredicted RBP21.25■□□□□ 0.99
TPM1-214ENST00000558544 ANTXR1Q9H6X2 564 aa21.25■□□□□ 0.99
TPM1-214ENST00000558544 PIH1D3Q9NQM4 214 aaKnown RBP21.25■□□□□ 0.99
TPM1-214ENST00000558544 PCDHAC2Q9Y5I4 1007 aa21.25■□□□□ 0.99
TPM1-214ENST00000558544 GOLIM4O00461 696 aa21.24■□□□□ 0.99
TPM1-214ENST00000558544 MMP14P50281 582 aa21.24■□□□□ 0.99
TPM1-214ENST00000558544 RBM5P52756 815 aaKnown RBP eCLIP21.24■□□□□ 0.99
TPM1-214ENST00000558544 HIRAP54198 1017 aaPredicted RBP21.24■□□□□ 0.99
TPM1-214ENST00000558544 CFAP100Q494V2 611 aa21.24■□□□□ 0.99
TPM1-214ENST00000558544 DZIP1Q86YF9 867 aaKnown RBP21.24■□□□□ 0.99
TPM1-214ENST00000558544 PI4K2BQ8TCG2 481 aa21.24■□□□□ 0.99
TPM1-214ENST00000558544 EDC3Q96F86 508 aaKnown RBP21.24■□□□□ 0.99
TPM1-214ENST00000558544 HAUS7Q99871 368 aa21.24■□□□□ 0.99
TPM1-214ENST00000558544 LRP2BPQ9P2M1 347 aa21.24■□□□□ 0.99
TPM1-214ENST00000558544 ERC2O15083 957 aa21.23■□□□□ 0.99
TPM1-214ENST00000558544 PDE4AP27815 886 aa21.23■□□□□ 0.99
TPM1-214ENST00000558544 CRKP46108 304 aa21.23■□□□□ 0.99
TPM1-214ENST00000558544 PDE1AP54750 535 aa21.23■□□□□ 0.99
TPM1-214ENST00000558544 DIXDC1Q155Q3 683 aa21.23■□□□□ 0.99
TPM1-214ENST00000558544 PAG1Q9NWQ8 432 aa21.23■□□□□ 0.99
TPM1-214ENST00000558544 RAI14Q9P0K7 980 aa21.23■□□□□ 0.99
TPM1-214ENST00000558544 SERPINA10Q9UK55 444 aa21.23■□□□□ 0.99
TPM1-214ENST00000558544 MECOMQ03112 1051 aa21.23■□□□□ 0.99
TPM1-214ENST00000558544 DLGAP5Q15398 846 aa21.23■□□□□ 0.99
TPM1-214ENST00000558544 TEKT1Q969V4 418 aa21.23■□□□□ 0.99
TPM1-214ENST00000558544 STAP2Q9UGK3 403 aa21.23■□□□□ 0.99
TPM1-214ENST00000558544 CLEC11AQ9Y240 323 aa21.23■□□□□ 0.99
TPM1-214ENST00000558544 IDH1O75874 414 aaKnown RBP21.22■□□□□ 0.99
TPM1-214ENST00000558544 GLRX3O76003 335 aaKnown RBP21.22■□□□□ 0.99
TPM1-214ENST00000558544 HDLBPQ00341 1268 aaKnown RBP21.22■□□□□ 0.99
TPM1-214ENST00000558544 NBPF9Q3BBW0 867 aa21.22■□□□□ 0.99
TPM1-214ENST00000558544 PLEKHM2Q8IWE5 1019 aa21.22■□□□□ 0.99
TPM1-214ENST00000558544 ASTN2O75129 1339 aaPredicted RBP21.21■□□□□ 0.99
TPM1-214ENST00000558544 WNT10BO00744 389 aa21.21■□□□□ 0.99
TPM1-214ENST00000558544 MAP4K4O95819 1239 aaPredicted RBP21.21■□□□□ 0.99
TPM1-214ENST00000558544 TTF1Q15361 905 aaPredicted RBP21.21■□□□□ 0.99
TPM1-214ENST00000558544 LDHDQ86WU2 507 aa21.21■□□□□ 0.99
TPM1-214ENST00000558544 MTMR14Q8NCE2 650 aa21.21■□□□□ 0.99
TPM1-214ENST00000558544 ZNF384Q8TF68 577 aa21.21■□□□□ 0.99
TPM1-214ENST00000558544 NSUN4Q96CB9 384 aaKnown RBP21.21■□□□□ 0.99
TPM1-214ENST00000558544 ZBED3Q96IU2 234 aaPredicted RBP21.21■□□□□ 0.99
TPM1-214ENST00000558544 CDK5RAP2Q96SN8 1893 aa21.2■□□□□ 0.98
TPM1-214ENST00000558544 SPDYE2BA6NHP3 402 aa21.2■□□□□ 0.98
TPM1-214ENST00000558544 SPDYE6P0CI01 402 aa21.2■□□□□ 0.98
TPM1-214ENST00000558544 HHIPL2Q6UWX4 724 aa21.2■□□□□ 0.98
TPM1-214ENST00000558544 AOX1Q06278 1338 aa21.19■□□□□ 0.98
TPM1-214ENST00000558544 PRMT6Q96LA8 375 aaPredicted RBP21.19■□□□□ 0.98
TPM1-214ENST00000558544 MRIQ9BWK5 157 aa21.19■□□□□ 0.98
TPM1-214ENST00000558544 GGA3Q9NZ52 723 aa21.19■□□□□ 0.98
TPM1-214ENST00000558544 DAGLAQ9Y4D2 1042 aa21.19■□□□□ 0.98
TPM1-214ENST00000558544 MROH7-TTC4A0A0A0MT08 1334 aa21.18■□□□□ 0.98
TPM1-214ENST00000558544 TOMM70O94826 608 aa21.18■□□□□ 0.98
TPM1-214ENST00000558544 MAP3K12Q12852 859 aa21.18■□□□□ 0.98
TPM1-214ENST00000558544 SLF2Q8IX21 1173 aa21.18■□□□□ 0.98
TPM1-214ENST00000558544 ZDHHC15Q96MV8 337 aa21.18■□□□□ 0.98
TPM1-214ENST00000558544 GAKO14976 1311 aa21.17■□□□□ 0.98
TPM1-214ENST00000558544 GSTO1P78417 241 aa21.17■□□□□ 0.98
TPM1-214ENST00000558544 ANGEL2Q5VTE6 544 aaKnown RBP21.17■□□□□ 0.98
TPM1-214ENST00000558544 MAP1SQ66K74 1059 aaPredicted RBP21.17■□□□□ 0.98
TPM1-214ENST00000558544 NAA16Q6N069 864 aaPredicted RBP21.17■□□□□ 0.98
TPM1-214ENST00000558544 MAGEB6Q8N7X4 407 aa21.17■□□□□ 0.98
TPM1-214ENST00000558544 ZC3H15Q8WU90 426 aaKnown RBP21.17■□□□□ 0.98
TPM1-214ENST00000558544 OSBPL3Q9H4L5 887 aa21.17■□□□□ 0.98
TPM1-214ENST00000558544 FOCADQ5VW36 1801 aa21.16■□□□□ 0.98
TPM1-214ENST00000558544 CLRN2A0PK11 232 aa21.16■□□□□ 0.98
TPM1-214ENST00000558544 APOBEC3HQ6NTF7 200 aaKnown RBP21.16■□□□□ 0.98
TPM1-214ENST00000558544 CHADLQ6NUI6 762 aa21.16■□□□□ 0.98
TPM1-214ENST00000558544 SKAP1Q86WV1 359 aa21.16■□□□□ 0.98
TPM1-214ENST00000558544 RBM46Q8TBY0 533 aaKnown RBP21.16■□□□□ 0.98
TPM1-214ENST00000558544 TDRD3Q9H7E2 651 aaKnown RBP21.16■□□□□ 0.98
TPM1-214ENST00000558544 PGAP2Q9UHJ9 254 aa21.16■□□□□ 0.98
TPM1-214ENST00000558544 TRPM7Q96QT4 1865 aa21.15■□□□□ 0.98
TPM1-214ENST00000558544 MYO1BO43795 1136 aa21.15■□□□□ 0.98
TPM1-214ENST00000558544 SMC1BQ8NDV3 1235 aa21.15■□□□□ 0.98
TPM1-214ENST00000558544 IGSF3O75054 1194 aa21.14■□□□□ 0.98
TPM1-214ENST00000558544 LDHCP07864 332 aa21.14■□□□□ 0.98
TPM1-214ENST00000558544 PDE6AP16499 860 aa21.14■□□□□ 0.98
TPM1-214ENST00000558544 CYP7A1P22680 504 aa21.14■□□□□ 0.98
TPM1-214ENST00000558544 BTDP43251 543 aa21.14■□□□□ 0.98
TPM1-214ENST00000558544 SPDYE2Q495Y8 402 aa21.14■□□□□ 0.98
TPM1-214ENST00000558544 SLC9C2Q5TAH2 1124 aa21.14■□□□□ 0.98
TPM1-214ENST00000558544 ADGRA1Q86SQ6 560 aa21.14■□□□□ 0.98
TPM1-214ENST00000558544 KBTBD3Q8NAB2 608 aa21.14■□□□□ 0.98
TPM1-214ENST00000558544 DCPSQ96C86 337 aaKnown RBP21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms