RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 POLA2Q14181 598 aa17.49■□□□□ 0.39
TRAPPC6B-206ENST00000556765 ARHGEF6Q15052 776 aa17.49■□□□□ 0.39
TRAPPC6B-206ENST00000556765 APOBEC3FQ8IUX4 373 aaKnown RBP17.49■□□□□ 0.39
TRAPPC6B-206ENST00000556765 FAM89AQ96GI7 184 aa17.49■□□□□ 0.39
TRAPPC6B-206ENST00000556765 CLMNQ96JQ2 1002 aa17.49■□□□□ 0.39
TRAPPC6B-206ENST00000556765 NEURL1BA8MQ27 555 aa17.48■□□□□ 0.39
TRAPPC6B-206ENST00000556765 SOX1O00570 391 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC6B-206ENST00000556765 C8orf34Q49A92 452 aa17.48■□□□□ 0.39
TRAPPC6B-206ENST00000556765 PODNQ7Z5L7 613 aa17.48■□□□□ 0.39
TRAPPC6B-206ENST00000556765 LNPKQ9C0E8 428 aa17.48■□□□□ 0.39
TRAPPC6B-206ENST00000556765 VCANP13611 3396 aa17.48■□□□□ 0.39
TRAPPC6B-206ENST00000556765 ANP32AP39687 249 aaKnown RBP17.47■□□□□ 0.39
TRAPPC6B-206ENST00000556765 BMP2KLQ5H9B9 411 aa17.47■□□□□ 0.39
TRAPPC6B-206ENST00000556765 SH3TC2Q8TF17 1288 aa17.47■□□□□ 0.39
TRAPPC6B-206ENST00000556765 LRCH3Q96II8 777 aa17.47■□□□□ 0.39
TRAPPC6B-206ENST00000556765 A0A1W2PPC1 479 aa17.46■□□□□ 0.39
TRAPPC6B-206ENST00000556765 GCKRQ14397 625 aa17.46■□□□□ 0.39
TRAPPC6B-206ENST00000556765 MAP3K11Q16584 847 aa17.46■□□□□ 0.39
TRAPPC6B-206ENST00000556765 PTPN18Q99952 460 aa17.46■□□□□ 0.39
TRAPPC6B-206ENST00000556765 MXD3Q9BW11 206 aa17.46■□□□□ 0.39
TRAPPC6B-206ENST00000556765 IGKV5-2P06315 115 aa17.45■□□□□ 0.38
TRAPPC6B-206ENST00000556765 NBPF7P0C2Y1 421 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC6B-206ENST00000556765 DACT2Q5SW24 774 aa17.45■□□□□ 0.38
TRAPPC6B-206ENST00000556765 ERC1Q8IUD2 1116 aa17.45■□□□□ 0.38
TRAPPC6B-206ENST00000556765 CCDC191Q8NCU4 936 aa17.45■□□□□ 0.38
TRAPPC6B-206ENST00000556765 SHISA4Q96DD7 197 aa17.45■□□□□ 0.38
TRAPPC6B-206ENST00000556765 MYD88Q99836 296 aa17.45■□□□□ 0.38
TRAPPC6B-206ENST00000556765 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
TRAPPC6B-206ENST00000556765 COL1A1P02452 1464 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC6B-206ENST00000556765 PPP1R12BO60237 982 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC6B-206ENST00000556765 GJA5P36382 358 aa17.44■□□□□ 0.38
TRAPPC6B-206ENST00000556765 TRIM28Q13263 835 aaKnown RBP17.44■□□□□ 0.38
TRAPPC6B-206ENST00000556765 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC6B-206ENST00000556765 SKAP1Q86WV1 359 aa17.44■□□□□ 0.38
TRAPPC6B-206ENST00000556765 HTATIP2Q9BUP3 242 aa17.44■□□□□ 0.38
TRAPPC6B-206ENST00000556765 COL25A1Q9BXS0 654 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC6B-206ENST00000556765 UPF2Q9HAU5 1272 aaKnown RBP17.44■□□□□ 0.38
TRAPPC6B-206ENST00000556765 SEC31BQ9NQW1 1179 aa17.44■□□□□ 0.38
TRAPPC6B-206ENST00000556765 NR2E3Q9Y5X4 410 aa17.44■□□□□ 0.38
TRAPPC6B-206ENST00000556765 SSC5DA1L4H1 1573 aa17.44■□□□□ 0.38
TRAPPC6B-206ENST00000556765 MYO3BQ8WXR4 1341 aa17.44■□□□□ 0.38
TRAPPC6B-206ENST00000556765 PNMA6EA0A0J9YXQ4 647 aa17.43■□□□□ 0.38
TRAPPC6B-206ENST00000556765 TESPA1A2RU30 521 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC6B-206ENST00000556765 UNCXA6NJT0 531 aa17.43■□□□□ 0.38
TRAPPC6B-206ENST00000556765 IRS4O14654 1257 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC6B-206ENST00000556765 SRGAP3O43295 1099 aa17.43■□□□□ 0.38
TRAPPC6B-206ENST00000556765 CWF19L2Q2TBE0 894 aaKnown RBP17.43■□□□□ 0.38
TRAPPC6B-206ENST00000556765 FBXW7Q969H0 707 aa17.43■□□□□ 0.38
TRAPPC6B-206ENST00000556765 DEFB129Q9H1M3 183 aa17.43■□□□□ 0.38
TRAPPC6B-206ENST00000556765 OSBPL3Q9H4L5 887 aa17.43■□□□□ 0.38
TRAPPC6B-206ENST00000556765 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
TRAPPC6B-206ENST00000556765 XDHP47989 1333 aa17.43■□□□□ 0.38
TRAPPC6B-206ENST00000556765 AOX1Q06278 1338 aa17.43■□□□□ 0.38
TRAPPC6B-206ENST00000556765 KIF1BPQ96EK5 621 aa17.42■□□□□ 0.38
TRAPPC6B-206ENST00000556765 ISCA1Q9BUE6 129 aa17.42■□□□□ 0.38
TRAPPC6B-206ENST00000556765 CWC25Q9NXE8 425 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC6B-206ENST00000556765 ATP5J2-PTCD1G3V325 749 aa17.41■□□□□ 0.38
TRAPPC6B-206ENST00000556765 MMP14P50281 582 aa17.41■□□□□ 0.38
TRAPPC6B-206ENST00000556765 UBE2Q1Q7Z7E8 422 aa17.41■□□□□ 0.38
TRAPPC6B-206ENST00000556765 SPTBN5Q9NRC6 3674 aaKnown RBP17.41■□□□□ 0.38
TRAPPC6B-206ENST00000556765 ZNF646O15015 1829 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC6B-206ENST00000556765 ATP2B4P23634 1241 aa17.4■□□□□ 0.38
TRAPPC6B-206ENST00000556765 TAF1CQ15572 869 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC6B-206ENST00000556765 STRIP1Q5VSL9 837 aa17.4■□□□□ 0.38
TRAPPC6B-206ENST00000556765 PLEKHM2Q8IWE5 1019 aa17.4■□□□□ 0.38
TRAPPC6B-206ENST00000556765 ZBED3Q96IU2 234 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC6B-206ENST00000556765 ZFYVE28Q9HCC9 887 aa17.4■□□□□ 0.38
TRAPPC6B-206ENST00000556765 MTFR1Q15390 333 aa17.39■□□□□ 0.37
TRAPPC6B-206ENST00000556765 RABL6Q3YEC7 729 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC6B-206ENST00000556765 NKX2-3Q8TAU0 364 aa17.39■□□□□ 0.37
TRAPPC6B-206ENST00000556765 MED23Q9ULK4 1368 aa17.39■□□□□ 0.37
TRAPPC6B-206ENST00000556765 H7C1W4 665 aa17.38■□□□□ 0.37
TRAPPC6B-206ENST00000556765 SURF6O75683 361 aaKnown RBP17.38■□□□□ 0.37
TRAPPC6B-206ENST00000556765 IREB2P48200 963 aaKnown RBP17.38■□□□□ 0.37
TRAPPC6B-206ENST00000556765 KIAA0825Q8IV33 1275 aa17.38■□□□□ 0.37
TRAPPC6B-206ENST00000556765 DEFB123Q8N688 67 aa17.38■□□□□ 0.37
TRAPPC6B-206ENST00000556765 DDRGK1Q96HY6 314 aa17.38■□□□□ 0.37
TRAPPC6B-206ENST00000556765 SUCLG2Q96I99 432 aa17.38■□□□□ 0.37
TRAPPC6B-206ENST00000556765 ARHGAP39Q9C0H5 1083 aa17.38■□□□□ 0.37
TRAPPC6B-206ENST00000556765 EXOC6BQ9Y2D4 811 aa17.38■□□□□ 0.37
TRAPPC6B-206ENST00000556765 STXBP5LQ9Y2K9 1186 aa17.38■□□□□ 0.37
TRAPPC6B-206ENST00000556765 PPP2R3BQ9Y5P8 575 aa17.38■□□□□ 0.37
TRAPPC6B-206ENST00000556765 SUPT20HL1Q3ZLR7 823 aa17.37■□□□□ 0.37
TRAPPC6B-206ENST00000556765 TTC22Q5TAA0 569 aa17.37■□□□□ 0.37
TRAPPC6B-206ENST00000556765 GPR153Q6NV75 609 aa17.37■□□□□ 0.37
TRAPPC6B-206ENST00000556765 ANKRD13AQ8IZ07 590 aa17.37■□□□□ 0.37
TRAPPC6B-206ENST00000556765 MS4A4AQ96JQ5 239 aa17.37■□□□□ 0.37
TRAPPC6B-206ENST00000556765 BICC1Q9H694 974 aaKnown RBP17.37■□□□□ 0.37
TRAPPC6B-206ENST00000556765 ZSWIM8A7E2V4 1837 aa17.36■□□□□ 0.37
TRAPPC6B-206ENST00000556765 GJA8P48165 433 aa17.36■□□□□ 0.37
TRAPPC6B-206ENST00000556765 KIF22Q14807 665 aa17.36■□□□□ 0.37
TRAPPC6B-206ENST00000556765 CCDC152Q4G0S7 254 aa17.36■□□□□ 0.37
TRAPPC6B-206ENST00000556765 CASC1Q6TDU7 716 aa17.36■□□□□ 0.37
TRAPPC6B-206ENST00000556765 RHPN1Q8TCX5 695 aa17.36■□□□□ 0.37
TRAPPC6B-206ENST00000556765 BRI3BPQ8WY22 251 aa17.36■□□□□ 0.37
TRAPPC6B-206ENST00000556765 OPTNQ96CV9 577 aa17.36■□□□□ 0.37
TRAPPC6B-206ENST00000556765 STAP2Q9UGK3 403 aa17.36■□□□□ 0.37
TRAPPC6B-206ENST00000556765 MYH3P11055 1940 aa17.36■□□□□ 0.37
TRAPPC6B-206ENST00000556765 USP2O75604 605 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC6B-206ENST00000556765 HSP90B1P14625 803 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms