RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 MYH13Q9UKX3 1938 aa17.23■□□□□ 0.35
SNX6-206ENST00000556162 SCN4AP35499 1836 aa17.23■□□□□ 0.35
SNX6-206ENST00000556162 GLRX3O76003 335 aaKnown RBP17.22■□□□□ 0.35
SNX6-206ENST00000556162 PDE1AP54750 535 aa17.22■□□□□ 0.35
SNX6-206ENST00000556162 TTF1Q15361 905 aaPredicted RBP17.22■□□□□ 0.35
SNX6-206ENST00000556162 EAPPQ56P03 285 aaPredicted RBP17.22■□□□□ 0.35
SNX6-206ENST00000556162 STAP2Q9UGK3 403 aa17.22■□□□□ 0.35
SNX6-206ENST00000556162 RBM5P52756 815 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNX6-206ENST00000556162 DZIP1Q86YF9 867 aaKnown RBP17.22■□□□□ 0.35
SNX6-206ENST00000556162 MRIQ9BWK5 157 aa17.22■□□□□ 0.35
SNX6-206ENST00000556162 RAI14Q9P0K7 980 aa17.22■□□□□ 0.35
SNX6-206ENST00000556162 SERPINA10Q9UK55 444 aa17.22■□□□□ 0.35
SNX6-206ENST00000556162 ZNF646O15015 1829 aaPredicted RBP17.22■□□□□ 0.35
SNX6-206ENST00000556162 GOLIM4O00461 696 aa17.21■□□□□ 0.35
SNX6-206ENST00000556162 HDLBPQ00341 1268 aaKnown RBP17.21■□□□□ 0.35
SNX6-206ENST00000556162 DLGAP5Q15398 846 aa17.21■□□□□ 0.35
SNX6-206ENST00000556162 KIF4BQ2VIQ3 1234 aa17.21■□□□□ 0.35
SNX6-206ENST00000556162 ANTXR1Q9H6X2 564 aa17.21■□□□□ 0.35
SNX6-206ENST00000556162 PAG1Q9NWQ8 432 aa17.21■□□□□ 0.35
SNX6-206ENST00000556162 KIF3CO14782 793 aa17.2■□□□□ 0.34
SNX6-206ENST00000556162 IGSF3O75054 1194 aa17.2■□□□□ 0.34
SNX6-206ENST00000556162 CFAP100Q494V2 611 aa17.2■□□□□ 0.34
SNX6-206ENST00000556162 PLEKHM2Q8IWE5 1019 aa17.2■□□□□ 0.34
SNX6-206ENST00000556162 SLF2Q8IX21 1173 aa17.2■□□□□ 0.34
SNX6-206ENST00000556162 PI4K2BQ8TCG2 481 aa17.2■□□□□ 0.34
SNX6-206ENST00000556162 TRPM4Q8TD43 1214 aa17.2■□□□□ 0.34
SNX6-206ENST00000556162 TEKT1Q969V4 418 aa17.2■□□□□ 0.34
SNX6-206ENST00000556162 PIH1D3Q9NQM4 214 aaKnown RBP17.2■□□□□ 0.34
SNX6-206ENST00000556162 AKAP11Q9UKA4 1901 aa17.2■□□□□ 0.34
SNX6-206ENST00000556162 EGFRP00533 1210 aa17.2■□□□□ 0.34
SNX6-206ENST00000556162 CRKP46108 304 aa17.2■□□□□ 0.34
SNX6-206ENST00000556162 CLEC11AQ9Y240 323 aa17.2■□□□□ 0.34
SNX6-206ENST00000556162 IDH1O75874 414 aaKnown RBP17.19■□□□□ 0.34
SNX6-206ENST00000556162 HIRAP54198 1017 aaPredicted RBP17.19■□□□□ 0.34
SNX6-206ENST00000556162 MECOMQ03112 1051 aa17.19■□□□□ 0.34
SNX6-206ENST00000556162 MAP3K12Q12852 859 aa17.19■□□□□ 0.34
SNX6-206ENST00000556162 HHIPL2Q6UWX4 724 aa17.19■□□□□ 0.34
SNX6-206ENST00000556162 MTMR14Q8NCE2 650 aa17.19■□□□□ 0.34
SNX6-206ENST00000556162 EDC3Q96F86 508 aaKnown RBP17.19■□□□□ 0.34
SNX6-206ENST00000556162 OSBPL3Q9H4L5 887 aa17.19■□□□□ 0.34
SNX6-206ENST00000556162 PDE4AP27815 886 aa17.18■□□□□ 0.34
SNX6-206ENST00000556162 GSTO1P78417 241 aa17.18■□□□□ 0.34
SNX6-206ENST00000556162 DIXDC1Q155Q3 683 aa17.18■□□□□ 0.34
SNX6-206ENST00000556162 NSUN4Q96CB9 384 aaKnown RBP17.18■□□□□ 0.34
SNX6-206ENST00000556162 AOX1Q06278 1338 aa17.18■□□□□ 0.34
SNX6-206ENST00000556162 WNT10BO00744 389 aa17.18■□□□□ 0.34
SNX6-206ENST00000556162 LDHCP07864 332 aa17.18■□□□□ 0.34
SNX6-206ENST00000556162 NBPF9Q3BBW0 867 aa17.18■□□□□ 0.34
SNX6-206ENST00000556162 LDHDQ86WU2 507 aa17.18■□□□□ 0.34
SNX6-206ENST00000556162 ZC3H15Q8WU90 426 aaKnown RBP17.18■□□□□ 0.34
SNX6-206ENST00000556162 SPDYE2BA6NHP3 402 aa17.17■□□□□ 0.34
SNX6-206ENST00000556162 MYO1BO43795 1136 aa17.17■□□□□ 0.34
SNX6-206ENST00000556162 SPDYE6P0CI01 402 aa17.17■□□□□ 0.34
SNX6-206ENST00000556162 NAA16Q6N069 864 aaPredicted RBP17.17■□□□□ 0.34
SNX6-206ENST00000556162 PRMT6Q96LA8 375 aaPredicted RBP17.17■□□□□ 0.34
SNX6-206ENST00000556162 ZDHHC15Q96MV8 337 aa17.17■□□□□ 0.34
SNX6-206ENST00000556162 MAP4K4O95819 1239 aaPredicted RBP17.16■□□□□ 0.34
SNX6-206ENST00000556162 POTEIP0CG38 1075 aa17.16■□□□□ 0.34
SNX6-206ENST00000556162 POTEJP0CG39 1038 aa17.16■□□□□ 0.34
SNX6-206ENST00000556162 FAM163AQ96GL9 167 aaPredicted RBP17.16■□□□□ 0.34
SNX6-206ENST00000556162 ZBED3Q96IU2 234 aaPredicted RBP17.16■□□□□ 0.34
SNX6-206ENST00000556162 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNX6-206ENST00000556162 PCDHAC2Q9Y5I4 1007 aa17.16■□□□□ 0.34
SNX6-206ENST00000556162 TOMM70O94826 608 aa17.16■□□□□ 0.34
SNX6-206ENST00000556162 TMED8Q6PL24 325 aaPredicted RBP17.16■□□□□ 0.34
SNX6-206ENST00000556162 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
SNX6-206ENST00000556162 SLC9C2Q5TAH2 1124 aa17.15■□□□□ 0.34
SNX6-206ENST00000556162 MAGEB6Q8N7X4 407 aa17.15■□□□□ 0.34
SNX6-206ENST00000556162 ZNF384Q8TF68 577 aa17.15■□□□□ 0.34
SNX6-206ENST00000556162 PGAP2Q9UHJ9 254 aa17.15■□□□□ 0.34
SNX6-206ENST00000556162 MROH7-TTC4A0A0A0MT08 1334 aa17.14■□□□□ 0.33
SNX6-206ENST00000556162 CYP7A1P22680 504 aa17.14■□□□□ 0.33
SNX6-206ENST00000556162 ZSCAN25Q6NSZ9 544 aa17.14■□□□□ 0.33
SNX6-206ENST00000556162 APOBEC3HQ6NTF7 200 aaKnown RBP17.14■□□□□ 0.33
SNX6-206ENST00000556162 KBTBD3Q8NAB2 608 aa17.14■□□□□ 0.33
SNX6-206ENST00000556162 DCPSQ96C86 337 aaKnown RBP17.14■□□□□ 0.33
SNX6-206ENST00000556162 GAKO14976 1311 aa17.14■□□□□ 0.33
SNX6-206ENST00000556162 ANGEL2Q5VTE6 544 aaKnown RBP17.14■□□□□ 0.33
SNX6-206ENST00000556162 CHADLQ6NUI6 762 aa17.14■□□□□ 0.33
SNX6-206ENST00000556162 EVI5LQ96CN4 794 aa17.14■□□□□ 0.33
SNX6-206ENST00000556162 TDRD3Q9H7E2 651 aaKnown RBP17.14■□□□□ 0.33
SNX6-206ENST00000556162 ASTN2O75129 1339 aaPredicted RBP17.13■□□□□ 0.33
SNX6-206ENST00000556162 TRIM6-TRIM34B2RNG4 842 aa17.13■□□□□ 0.33
SNX6-206ENST00000556162 LRRFIP1Q32MZ4 808 aaKnown RBP17.13■□□□□ 0.33
SNX6-206ENST00000556162 RBM46Q8TBY0 533 aaKnown RBP17.13■□□□□ 0.33
SNX6-206ENST00000556162 NOL10Q9BSC4 688 aaKnown RBP17.13■□□□□ 0.33
SNX6-206ENST00000556162 GGA3Q9NZ52 723 aa17.13■□□□□ 0.33
SNX6-206ENST00000556162 GPR75-ASB3A0A0A6YYF3 556 aa17.12■□□□□ 0.33
SNX6-206ENST00000556162 CLRN2A0PK11 232 aa17.12■□□□□ 0.33
SNX6-206ENST00000556162 BAG3O95817 575 aa17.12■□□□□ 0.33
SNX6-206ENST00000556162 PDE6AP16499 860 aa17.12■□□□□ 0.33
SNX6-206ENST00000556162 MAP1SQ66K74 1059 aaPredicted RBP17.12■□□□□ 0.33
SNX6-206ENST00000556162 SMC1BQ8NDV3 1235 aa17.12■□□□□ 0.33
SNX6-206ENST00000556162 FSD1Q9BTV5 496 aa17.12■□□□□ 0.33
SNX6-206ENST00000556162 BTDP43251 543 aa17.12■□□□□ 0.33
SNX6-206ENST00000556162 SPDYE2Q495Y8 402 aa17.12■□□□□ 0.33
SNX6-206ENST00000556162 CNTROBQ8N137 903 aa17.12■□□□□ 0.33
SNX6-206ENST00000556162 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
SNX6-206ENST00000556162 VEZTQ9HBM0 779 aa17.12■□□□□ 0.33
SNX6-206ENST00000556162 USP40Q9NVE5 1235 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms