RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 SUGT1Q9Y2Z0 365 aa13.39□□□□□ -0.27
PNN-203ENST00000554117 MGAMO43451 1857 aa13.39□□□□□ -0.27
PNN-203ENST00000554117 PTPN12Q05209 780 aaKnown RBP13.38□□□□□ -0.27
PNN-203ENST00000554117 RASA3Q14644 834 aa13.38□□□□□ -0.27
PNN-203ENST00000554117 LRRC24Q50LG9 513 aa13.38□□□□□ -0.27
PNN-203ENST00000554117 DZIP1LQ8IYY4 767 aaKnown RBP13.38□□□□□ -0.27
PNN-203ENST00000554117 WDR66Q8TBY9 1149 aa13.38□□□□□ -0.27
PNN-203ENST00000554117 LPIN2Q92539 896 aa13.38□□□□□ -0.27
PNN-203ENST00000554117 KAZALD1Q96I82 304 aa13.38□□□□□ -0.27
PNN-203ENST00000554117 USP44Q9H0E7 712 aa13.38□□□□□ -0.27
PNN-203ENST00000554117 CEP126Q9P2H0 1117 aa13.38□□□□□ -0.27
PNN-203ENST00000554117 IQSEC3Q9UPP2 1182 aaPredicted RBP13.38□□□□□ -0.27
PNN-203ENST00000554117 CSADQ9Y600 493 aa13.38□□□□□ -0.27
PNN-203ENST00000554117 RBBP6Q7Z6E9 1792 aaKnown RBP13.37□□□□□ -0.27
PNN-203ENST00000554117 EYA2O00167 538 aa13.37□□□□□ -0.27
PNN-203ENST00000554117 GNAI3P08754 354 aa13.37□□□□□ -0.27
PNN-203ENST00000554117 MAP3K11Q16584 847 aa13.37□□□□□ -0.27
PNN-203ENST00000554117 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
PNN-203ENST00000554117 SPRYD7Q5W111 196 aa13.37□□□□□ -0.27
PNN-203ENST00000554117 FBXO33Q7Z6M2 555 aa13.37□□□□□ -0.27
PNN-203ENST00000554117 ZGPATQ8N5A5 531 aaKnown RBP13.37□□□□□ -0.27
PNN-203ENST00000554117 ANKRD44Q8N8A2 993 aa13.37□□□□□ -0.27
PNN-203ENST00000554117 CDCA7LQ96GN5 454 aa13.37□□□□□ -0.27
PNN-203ENST00000554117 TDRD3Q9H7E2 651 aaKnown RBP13.37□□□□□ -0.27
PNN-203ENST00000554117 ZNF70Q9UC06 446 aaPredicted RBP13.37□□□□□ -0.27
PNN-203ENST00000554117 NOB1Q9ULX3 412 aaKnown RBP13.37□□□□□ -0.27
PNN-203ENST00000554117 TCP10L2B9ZVM9 353 aa13.36□□□□□ -0.27
PNN-203ENST00000554117 FKTNO75072 461 aa13.36□□□□□ -0.27
PNN-203ENST00000554117 TBC1D8O95759 1140 aa13.36□□□□□ -0.27
PNN-203ENST00000554117 ARHGEF6Q15052 776 aa13.36□□□□□ -0.27
PNN-203ENST00000554117 LDLRAD1Q5T700 205 aa13.36□□□□□ -0.27
PNN-203ENST00000554117 SIL1Q9H173 461 aa13.36□□□□□ -0.27
PNN-203ENST00000554117 DOCK1Q14185 1865 aa13.36□□□□□ -0.27
PNN-203ENST00000554117 CDK5RAP2Q96SN8 1893 aa13.36□□□□□ -0.27
PNN-203ENST00000554117 MAST2Q6P0Q8 1798 aa13.35□□□□□ -0.27
PNN-203ENST00000554117 CIAO1O76071 339 aa13.35□□□□□ -0.27
PNN-203ENST00000554117 IL15P40933 162 aaPredicted RBP13.35□□□□□ -0.27
PNN-203ENST00000554117 ATP2B3Q16720 1220 aa13.35□□□□□ -0.27
PNN-203ENST00000554117 NOM1Q5C9Z4 860 aaKnown RBP13.35□□□□□ -0.27
PNN-203ENST00000554117 NBPF12Q5TAG4 269 aaPredicted RBP13.35□□□□□ -0.27
PNN-203ENST00000554117 DCAF15Q66K64 600 aa13.35□□□□□ -0.27
PNN-203ENST00000554117 SLF2Q8IX21 1173 aa13.35□□□□□ -0.27
PNN-203ENST00000554117 KLHDC4Q8TBB5 520 aa13.35□□□□□ -0.27
PNN-203ENST00000554117 WNK4Q96J92 1243 aa13.35□□□□□ -0.27
PNN-203ENST00000554117 MYO5AQ9Y4I1 1855 aaKnown RBP13.35□□□□□ -0.27
PNN-203ENST00000554117 MYH8P13535 1937 aa13.35□□□□□ -0.27
PNN-203ENST00000554117 FOCADQ5VW36 1801 aa13.34□□□□□ -0.27
PNN-203ENST00000554117 GPR25O00155 361 aa13.34□□□□□ -0.27
PNN-203ENST00000554117 BCAMP50895 628 aa13.34□□□□□ -0.27
PNN-203ENST00000554117 TRMT2AQ8IZ69 625 aaKnown RBP13.34□□□□□ -0.27
PNN-203ENST00000554117 VGLL2Q8N8G2 317 aa13.34□□□□□ -0.27
PNN-203ENST00000554117 ARHGAP45Q92619 1136 aa13.34□□□□□ -0.27
PNN-203ENST00000554117 MRIQ9BWK5 157 aa13.34□□□□□ -0.27
PNN-203ENST00000554117 DENND2AQ9ULE3 1009 aa13.34□□□□□ -0.27
PNN-203ENST00000554117 AKAP2Q9Y2D5 859 aa13.34□□□□□ -0.27
PNN-203ENST00000554117 PTPRFP10586 1907 aa13.34□□□□□ -0.27
PNN-203ENST00000554117 SEMA3EO15041 775 aa13.33□□□□□ -0.28
PNN-203ENST00000554117 LDHBP07195 334 aaKnown RBP13.33□□□□□ -0.28
PNN-203ENST00000554117 HHIPL2Q6UWX4 724 aa13.33□□□□□ -0.28
PNN-203ENST00000554117 FAM83AQ86UY5 434 aa13.33□□□□□ -0.28
PNN-203ENST00000554117 IFNL1Q8IU54 200 aa13.33□□□□□ -0.28
PNN-203ENST00000554117 ZNF296Q8WUU4 475 aaPredicted RBP13.33□□□□□ -0.28
PNN-203ENST00000554117 ERO1AQ96HE7 468 aa13.33□□□□□ -0.28
PNN-203ENST00000554117 ZDHHC15Q96MV8 337 aa13.33□□□□□ -0.28
PNN-203ENST00000554117 PCDHAC2Q9Y5I4 1007 aa13.33□□□□□ -0.28
PNN-203ENST00000554117 LRRFIP2Q9Y608 721 aaKnown RBP13.33□□□□□ -0.28
PNN-203ENST00000554117 MYH1P12882 1939 aa13.33□□□□□ -0.28
PNN-203ENST00000554117 SSC5DA1L4H1 1573 aa13.32□□□□□ -0.28
PNN-203ENST00000554117 USP2O75604 605 aaPredicted RBP13.32□□□□□ -0.28
PNN-203ENST00000554117 GORABQ5T7V8 394 aa13.32□□□□□ -0.28
PNN-203ENST00000554117 FKBP1CQ5VVH2 108 aa13.32□□□□□ -0.28
PNN-203ENST00000554117 SPTY2D1Q68D10 685 aaPredicted RBP13.32□□□□□ -0.28
PNN-203ENST00000554117 FRAT1Q92837 279 aaPredicted RBP13.32□□□□□ -0.28
PNN-203ENST00000554117 OPTNQ96CV9 577 aa13.32□□□□□ -0.28
PNN-203ENST00000554117 CFHR5Q9BXR6 569 aa13.32□□□□□ -0.28
PNN-203ENST00000554117 ELP3Q9H9T3 547 aa13.32□□□□□ -0.28
PNN-203ENST00000554117 FZD1Q9UP38 647 aa13.32□□□□□ -0.28
PNN-203ENST00000554117 SRGAP3O43295 1099 aa13.31□□□□□ -0.28
PNN-203ENST00000554117 FGFR2P21802 821 aa13.31□□□□□ -0.28
PNN-203ENST00000554117 GTF2A2P52657 109 aa13.31□□□□□ -0.28
PNN-203ENST00000554117 RARSP54136 660 aaKnown RBP13.31□□□□□ -0.28
PNN-203ENST00000554117 MAP3K9P80192 1104 aa13.31□□□□□ -0.28
PNN-203ENST00000554117 FBXO46Q6PJ61 603 aaPredicted RBP13.31□□□□□ -0.28
PNN-203ENST00000554117 DZIP1Q86YF9 867 aaKnown RBP13.31□□□□□ -0.28
PNN-203ENST00000554117 TMEM39BQ9GZU3 492 aa13.31□□□□□ -0.28
PNN-203ENST00000554117 RPAP1Q9BWH6 1393 aaPredicted RBP13.31□□□□□ -0.28
PNN-203ENST00000554117 RGS19P49795 217 aa13.3□□□□□ -0.28
PNN-203ENST00000554117 MVPQ14764 893 aaKnown RBP13.3□□□□□ -0.28
PNN-203ENST00000554117 CLMNQ96JQ2 1002 aa13.3□□□□□ -0.28
PNN-203ENST00000554117 ZNF341Q9BYN7 854 aa13.3□□□□□ -0.28
PNN-203ENST00000554117 COPRSQ9NQ92 184 aa13.3□□□□□ -0.28
PNN-203ENST00000554117 GNAI2P04899 355 aa13.29□□□□□ -0.28
PNN-203ENST00000554117 RFX5P48382 616 aaPredicted RBP13.29□□□□□ -0.28
PNN-203ENST00000554117 G3BP1Q13283 466 aaKnown RBP eCLIP13.29□□□□□ -0.28
PNN-203ENST00000554117 KIF22Q14807 665 aa13.29□□□□□ -0.28
PNN-203ENST00000554117 INTS3Q68E01 1043 aaKnown RBP13.29□□□□□ -0.28
PNN-203ENST00000554117 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
PNN-203ENST00000554117 OTUD5Q96G74 571 aa13.29□□□□□ -0.28
PNN-203ENST00000554117 WRNIP1Q96S55 665 aa13.29□□□□□ -0.28
PNN-203ENST00000554117 NOL10Q9BSC4 688 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms