RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 SLC10A3P09131 477 aa16.29■□□□□ 0.2
HNRNPC-205ENST00000553300 CRKP46108 304 aa16.29■□□□□ 0.2
HNRNPC-205ENST00000553300 G3BP1Q13283 466 aaKnown RBP eCLIP16.29■□□□□ 0.24e-10■□□□□ 8.8
HNRNPC-205ENST00000553300 SPDYE2Q495Y8 402 aa16.29■□□□□ 0.2
HNRNPC-205ENST00000553300 PRAMEF18Q5VWM3 479 aa16.29■□□□□ 0.2
HNRNPC-205ENST00000553300 ITPRIPQ8IWB1 547 aa16.29■□□□□ 0.2
HNRNPC-205ENST00000553300 VEZTQ9HBM0 779 aa16.29■□□□□ 0.2
HNRNPC-205ENST00000553300 DENND2AQ9ULE3 1009 aa16.29■□□□□ 0.2
HNRNPC-205ENST00000553300 CLRN2A0PK11 232 aa16.28■□□□□ 0.2
HNRNPC-205ENST00000553300 UNCXA6NJT0 531 aa16.28■□□□□ 0.2
HNRNPC-205ENST00000553300 PPP1R12BO60237 982 aaPredicted RBP16.28■□□□□ 0.2
HNRNPC-205ENST00000553300 HHIPL2Q6UWX4 724 aa16.28■□□□□ 0.2
HNRNPC-205ENST00000553300 PCDHAC2Q9Y5I4 1007 aa16.28■□□□□ 0.2
HNRNPC-205ENST00000553300 MYH13Q9UKX3 1938 aa16.28■□□□□ 0.2
HNRNPC-205ENST00000553300 UBE2Q2LH0YL09 131 aa16.27■□□□□ 0.2
HNRNPC-205ENST00000553300 ZBTB7BO15156 539 aaPredicted RBP16.27■□□□□ 0.2
HNRNPC-205ENST00000553300 HSPA8P11142 646 aaKnown RBP16.27■□□□□ 0.2
HNRNPC-205ENST00000553300 TNNI2P48788 182 aa16.27■□□□□ 0.2
HNRNPC-205ENST00000553300 LBX1P52954 281 aa16.27■□□□□ 0.2
HNRNPC-205ENST00000553300 ATP8B2P98198 1209 aa16.27■□□□□ 0.2
HNRNPC-205ENST00000553300 ZGPATQ8N5A5 531 aaKnown RBP16.27■□□□□ 0.2
HNRNPC-205ENST00000553300 ZDHHC15Q96MV8 337 aa16.27■□□□□ 0.2
HNRNPC-205ENST00000553300 ZNF70Q9UC06 446 aaPredicted RBP16.27■□□□□ 0.2
HNRNPC-205ENST00000553300 PNMA6EA0A0J9YXQ4 647 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 A0A1B0GUL7 405 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 TIMM10P62072 90 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 KIF23Q02241 960 aaPredicted RBP16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 TFCP2Q12800 502 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 RASA3Q14644 834 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 MVPQ14764 893 aaKnown RBP16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 CCDC102BQ68D86 513 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 RASAL3Q86YV0 1011 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 TNS4Q8IZW8 715 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 SSH3Q8TE77 659 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 TDRD3Q9H7E2 651 aaKnown RBP16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 PDS5AQ29RF7 1337 aaKnown RBP16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 SALL1Q9NSC2 1324 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 RLBP1P12271 317 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 POLA2Q14181 598 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 GRIK5Q16478 980 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 MAP3K11Q16584 847 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 MOB2Q70IA6 237 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 TMOD2Q9NZR1 351 aa16.26■□□□□ 0.19
HNRNPC-205ENST00000553300 PHKA1P46020 1223 aa16.25■□□□□ 0.19
HNRNPC-205ENST00000553300 LDLRAD1Q5T700 205 aa16.25■□□□□ 0.19
HNRNPC-205ENST00000553300 FKBP1CQ5VVH2 108 aa16.25■□□□□ 0.19
HNRNPC-205ENST00000553300 XAGE2Q96GT9 111 aa16.25■□□□□ 0.19
HNRNPC-205ENST00000553300 ZIC5Q96T25 663 aa16.25■□□□□ 0.19
HNRNPC-205ENST00000553300 SAGE1Q9NXZ1 904 aa16.25■□□□□ 0.19
HNRNPC-205ENST00000553300 ANGEL1Q9UNK9 670 aaKnown RBP16.25■□□□□ 0.19
HNRNPC-205ENST00000553300 LDHBP07195 334 aaKnown RBP16.24■□□□□ 0.19
HNRNPC-205ENST00000553300 IREB2P48200 963 aaKnown RBP16.24■□□□□ 0.19
HNRNPC-205ENST00000553300 NEUROD6Q96NK8 337 aa16.24■□□□□ 0.19
HNRNPC-205ENST00000553300 CHMP4BQ9H444 224 aaKnown RBP16.24■□□□□ 0.19
HNRNPC-205ENST00000553300 GPR108Q9NPR9 543 aa16.24■□□□□ 0.19
HNRNPC-205ENST00000553300 AOX1Q06278 1338 aa16.23■□□□□ 0.19
HNRNPC-205ENST00000553300 ADORA1P30542 326 aa16.23■□□□□ 0.19
HNRNPC-205ENST00000553300 PRKG1Q13976 671 aa16.23■□□□□ 0.19
HNRNPC-205ENST00000553300 GORABQ5T7V8 394 aa16.23■□□□□ 0.19
HNRNPC-205ENST00000553300 NBPF12Q5TAG4 269 aaPredicted RBP16.23■□□□□ 0.19
HNRNPC-205ENST00000553300 SPTY2D1Q68D10 685 aaPredicted RBP16.23■□□□□ 0.19
HNRNPC-205ENST00000553300 APOBEC3HQ6NTF7 200 aaKnown RBP16.23■□□□□ 0.19
HNRNPC-205ENST00000553300 HOOK2Q96ED9 719 aa16.23■□□□□ 0.19
HNRNPC-205ENST00000553300 CSRNP1Q96S65 589 aa16.23■□□□□ 0.19
HNRNPC-205ENST00000553300 RCAN3Q9UKA8 241 aa16.23■□□□□ 0.19
HNRNPC-205ENST00000553300 AKAP11Q9UKA4 1901 aa16.22■□□□□ 0.19
HNRNPC-205ENST00000553300 TCP10L2B9ZVM9 353 aa16.22■□□□□ 0.19
HNRNPC-205ENST00000553300 SURF6O75683 361 aaKnown RBP16.22■□□□□ 0.19
HNRNPC-205ENST00000553300 OS9Q13438 667 aaPredicted RBP16.22■□□□□ 0.19
HNRNPC-205ENST00000553300 FAM83AQ86UY5 434 aa16.22■□□□□ 0.19
HNRNPC-205ENST00000553300 SLF2Q8IX21 1173 aa16.22■□□□□ 0.19
HNRNPC-205ENST00000553300 PANK1Q8TE04 598 aa16.22■□□□□ 0.19
HNRNPC-205ENST00000553300 SLC10A4Q96EP9 437 aa16.22■□□□□ 0.19
HNRNPC-205ENST00000553300 NOP58Q9Y2X3 529 aaKnown RBP16.22■□□□□ 0.19
HNRNPC-205ENST00000553300 PRDX5P30044 214 aa16.21■□□□□ 0.19
HNRNPC-205ENST00000553300 RASGRF1Q13972 1273 aa16.21■□□□□ 0.19
HNRNPC-205ENST00000553300 TEPSINQ96N21 525 aa16.21■□□□□ 0.19
HNRNPC-205ENST00000553300 C1orf115Q9H7X2 142 aa16.21■□□□□ 0.19
HNRNPC-205ENST00000553300 DDX19BQ9UMR2 479 aa16.21■□□□□ 0.19
HNRNPC-205ENST00000553300 USP2O75604 605 aaPredicted RBP16.2■□□□□ 0.18
HNRNPC-205ENST00000553300 TM4SF4P48230 202 aa16.2■□□□□ 0.18
HNRNPC-205ENST00000553300 INHBEP58166 350 aa16.2■□□□□ 0.18
HNRNPC-205ENST00000553300 SREBF2Q12772 1141 aa16.2■□□□□ 0.18
HNRNPC-205ENST00000553300 ANKRD13AQ8IZ07 590 aa16.2■□□□□ 0.18
HNRNPC-205ENST00000553300 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.2■□□□□ 0.18
HNRNPC-205ENST00000553300 RNF186Q9NXI6 227 aa16.2■□□□□ 0.18
HNRNPC-205ENST00000553300 SSC5DA1L4H1 1573 aa16.19■□□□□ 0.18
HNRNPC-205ENST00000553300 UQCRFS1P1P0C7P4 283 aa16.19■□□□□ 0.18
HNRNPC-205ENST00000553300 ZBTB48P10074 688 aaPredicted RBP16.19■□□□□ 0.18
HNRNPC-205ENST00000553300 CEP85Q6P2H3 762 aa16.19■□□□□ 0.18
HNRNPC-205ENST00000553300 TMEM39BQ9GZU3 492 aa16.19■□□□□ 0.18
HNRNPC-205ENST00000553300 ABCF2Q9UG63 623 aa16.19■□□□□ 0.18
HNRNPC-205ENST00000553300 DAGLAQ9Y4D2 1042 aa16.19■□□□□ 0.18
HNRNPC-205ENST00000553300 TRPA1O75762 1119 aa16.18■□□□□ 0.18
HNRNPC-205ENST00000553300 ARID4AP29374 1257 aaPredicted RBP16.18■□□□□ 0.18
HNRNPC-205ENST00000553300 DIXDC1Q155Q3 683 aa16.18■□□□□ 0.18
HNRNPC-205ENST00000553300 HSP90AB4PQ58FF6 505 aa16.18■□□□□ 0.18
HNRNPC-205ENST00000553300 TNNI3KQ59H18 835 aa16.18■□□□□ 0.18
HNRNPC-205ENST00000553300 CCDC158Q5M9N0 1113 aa16.18■□□□□ 0.18
HNRNPC-205ENST00000553300 SPRYD7Q5W111 196 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms