RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 CWC22Q9HCG8 908 aaKnown RBP23.27■■□□□ 1.32
RBFOX1-215ENST00000553186 CD209Q9NNX6 404 aa23.27■■□□□ 1.32
RBFOX1-215ENST00000553186 SALL1Q9NSC2 1324 aa23.26■■□□□ 1.31
RBFOX1-215ENST00000553186 PATL2C9JE40 543 aaKnown RBP23.26■■□□□ 1.31
RBFOX1-215ENST00000553186 H0YIN7 160 aa23.26■■□□□ 1.31
RBFOX1-215ENST00000553186 IL1R1P14778 569 aa23.26■■□□□ 1.31
RBFOX1-215ENST00000553186 PRDX5P30044 214 aa23.26■■□□□ 1.31
RBFOX1-215ENST00000553186 ALX1Q15699 326 aa23.26■■□□□ 1.31
RBFOX1-215ENST00000553186 STYK1Q6J9G0 422 aa23.26■■□□□ 1.31
RBFOX1-215ENST00000553186 JAG2Q9Y219 1238 aa23.26■■□□□ 1.31
RBFOX1-215ENST00000553186 HMGB1P09429 215 aaKnown RBP23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 HAND2P61296 217 aa23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 TOB2Q14106 344 aaPredicted RBP23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 NAA16Q6N069 864 aaPredicted RBP23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 ZNF622Q969S3 477 aaKnown RBP eCLIP23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 EPB41L4AQ9HCS5 686 aaPredicted RBP23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 GSG1L2A8MUP6 293 aa23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 C6orf229H3BNL8 230 aa23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 APPP05067 770 aa23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 MECOMQ03112 1051 aa23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 NFKBIBQ15653 356 aa23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 WDR66Q8TBY9 1149 aa23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 RIOK1Q9BRS2 568 aaKnown RBP23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 ZMYM6O95789 1325 aa23.25■■□□□ 1.31
RBFOX1-215ENST00000553186 LARGE1O95461 756 aa23.24■■□□□ 1.31
RBFOX1-215ENST00000553186 GNAT2P19087 354 aa23.24■■□□□ 1.31
RBFOX1-215ENST00000553186 SLC16A10Q8TF71 515 aa23.24■■□□□ 1.31
RBFOX1-215ENST00000553186 TPCN1Q9ULQ1 816 aa23.24■■□□□ 1.31
RBFOX1-215ENST00000553186 ZNF213O14771 459 aa23.24■■□□□ 1.31
RBFOX1-215ENST00000553186 PRKAB2O43741 272 aa23.24■■□□□ 1.31
RBFOX1-215ENST00000553186 NBR1Q14596 966 aa23.24■■□□□ 1.31
RBFOX1-215ENST00000553186 DHX32Q7L7V1 743 aaKnown RBP23.24■■□□□ 1.31
RBFOX1-215ENST00000553186 NBPF3Q9H094 633 aa23.24■■□□□ 1.31
RBFOX1-215ENST00000553186 DUOX1Q9NRD9 1551 aa23.23■■□□□ 1.31
RBFOX1-215ENST00000553186 MYH13Q9UKX3 1938 aa23.23■■□□□ 1.31
RBFOX1-215ENST00000553186 CHRNA5P30532 468 aa23.23■■□□□ 1.31
RBFOX1-215ENST00000553186 EXOSC10Q01780 885 aaKnown RBP23.23■■□□□ 1.31
RBFOX1-215ENST00000553186 ANKRD1Q15327 319 aa23.23■■□□□ 1.31
RBFOX1-215ENST00000553186 IFNL3Q8IZI9 196 aa23.23■■□□□ 1.31
RBFOX1-215ENST00000553186 MPNDQ8N594 471 aa23.23■■□□□ 1.31
RBFOX1-215ENST00000553186 MAGEB6P1A0A0J9YX57 407 aa23.23■■□□□ 1.31
RBFOX1-215ENST00000553186 TMED8Q6PL24 325 aaPredicted RBP23.23■■□□□ 1.31
RBFOX1-215ENST00000553186 ZSCAN31Q96LW9 406 aaPredicted RBP23.23■■□□□ 1.31
RBFOX1-215ENST00000553186 IGSF3O75054 1194 aa23.22■■□□□ 1.31
RBFOX1-215ENST00000553186 RAB3GAP1Q15042 981 aa23.22■■□□□ 1.31
RBFOX1-215ENST00000553186 ME3Q16798 604 aa23.22■■□□□ 1.31
RBFOX1-215ENST00000553186 SH2B1Q9NRF2 756 aaPredicted RBP23.22■■□□□ 1.31
RBFOX1-215ENST00000553186 SLC4A4Q9Y6R1 1079 aa23.22■■□□□ 1.31
RBFOX1-215ENST00000553186 SPTY2D1Q68D10 685 aaPredicted RBP23.21■■□□□ 1.31
RBFOX1-215ENST00000553186 DPP8Q6V1X1 898 aaPredicted RBP23.21■■□□□ 1.31
RBFOX1-215ENST00000553186 Q6ZUG5 572 aa23.2■■□□□ 1.3
RBFOX1-215ENST00000553186 C10orf71Q711Q0 1435 aa23.2■■□□□ 1.3
RBFOX1-215ENST00000553186 ST3GAL1Q11201 340 aa23.2■■□□□ 1.3
RBFOX1-215ENST00000553186 AGXT2Q9BYV1 514 aa23.2■■□□□ 1.3
RBFOX1-215ENST00000553186 NAPBQ9H115 298 aa23.2■■□□□ 1.3
RBFOX1-215ENST00000553186 DYNLL1P63167 89 aaKnown RBP23.19■■□□□ 1.3
RBFOX1-215ENST00000553186 GRIK5Q16478 980 aa23.19■■□□□ 1.3
RBFOX1-215ENST00000553186 ILDR1Q86SU0 546 aaPredicted RBP23.19■■□□□ 1.3
RBFOX1-215ENST00000553186 TBC1D10CQ8IV04 446 aa23.19■■□□□ 1.3
RBFOX1-215ENST00000553186 CNKSR1Q969H4 720 aa23.19■■□□□ 1.3
RBFOX1-215ENST00000553186 LDHBP07195 334 aaKnown RBP23.18■■□□□ 1.3
RBFOX1-215ENST00000553186 LRRC2Q9BYS8 371 aa23.18■■□□□ 1.3
RBFOX1-215ENST00000553186 NACAP1Q9BZK3 213 aa23.18■■□□□ 1.3
RBFOX1-215ENST00000553186 TMX4Q9H1E5 349 aaPredicted RBP23.18■■□□□ 1.3
RBFOX1-215ENST00000553186 PKP1Q13835 747 aa23.18■■□□□ 1.3
RBFOX1-215ENST00000553186 MB21D2Q8IYB1 491 aaPredicted RBP23.18■■□□□ 1.3
RBFOX1-215ENST00000553186 C7orf43Q8WVR3 580 aa23.18■■□□□ 1.3
RBFOX1-215ENST00000553186 COA1Q9GZY4 146 aa23.18■■□□□ 1.3
RBFOX1-215ENST00000553186 RIMBP2O15034 1052 aa23.17■■□□□ 1.3
RBFOX1-215ENST00000553186 DZIP1Q86YF9 867 aaKnown RBP23.17■■□□□ 1.3
RBFOX1-215ENST00000553186 FBXL16Q8N461 479 aa23.17■■□□□ 1.3
RBFOX1-215ENST00000553186 SDR42E1Q8WUS8 393 aa23.17■■□□□ 1.3
RBFOX1-215ENST00000553186 ZC3H12CQ9C0D7 883 aaKnown RBP23.17■■□□□ 1.3
RBFOX1-215ENST00000553186 LAMA4Q16363 1823 aa23.17■■□□□ 1.3
RBFOX1-215ENST00000553186 NCOA7Q8NI08 942 aa23.17■■□□□ 1.3
RBFOX1-215ENST00000553186 TNPO1Q92973 898 aaKnown RBP23.17■■□□□ 1.3
RBFOX1-215ENST00000553186 FAM205AQ6ZU69 1335 aa23.16■■□□□ 1.3
RBFOX1-215ENST00000553186 NUCB2P80303 420 aa23.16■■□□□ 1.3
RBFOX1-215ENST00000553186 CCDC83Q8IWF9 413 aa23.16■■□□□ 1.3
RBFOX1-215ENST00000553186 BRF1Q92994 677 aa23.16■■□□□ 1.3
RBFOX1-215ENST00000553186 SLX4Q8IY92 1834 aa23.16■■□□□ 1.3
RBFOX1-215ENST00000553186 MAST2Q6P0Q8 1798 aa23.16■■□□□ 1.3
RBFOX1-215ENST00000553186 TDO2P48775 406 aa23.16■■□□□ 1.3
RBFOX1-215ENST00000553186 CHST3Q7LGC8 479 aa23.16■■□□□ 1.3
RBFOX1-215ENST00000553186 NECAB1Q8N987 351 aa23.16■■□□□ 1.3
RBFOX1-215ENST00000553186 AATFQ9NY61 560 aaKnown RBP eCLIP23.16■■□□□ 1.3
RBFOX1-215ENST00000553186 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.15■■□□□ 1.3
RBFOX1-215ENST00000553186 NKX2-3Q8TAU0 364 aa23.14■■□□□ 1.3
RBFOX1-215ENST00000553186 GOLGB1Q14789 3259 aaKnown RBP23.14■■□□□ 1.3
RBFOX1-215ENST00000553186 MCM5P33992 734 aa23.14■■□□□ 1.29
RBFOX1-215ENST00000553186 ANTXR2P58335 489 aa23.14■■□□□ 1.29
RBFOX1-215ENST00000553186 ZDHHC9Q9Y397 364 aa23.14■■□□□ 1.29
RBFOX1-215ENST00000553186 TACC3Q9Y6A5 838 aa23.14■■□□□ 1.29
RBFOX1-215ENST00000553186 SNED1Q8TER0 1413 aa23.14■■□□□ 1.29
RBFOX1-215ENST00000553186 MFSD14BQ5SR56 506 aa23.13■■□□□ 1.29
RBFOX1-215ENST00000553186 RALYLQ86SE5 291 aaKnown RBP23.13■■□□□ 1.29
RBFOX1-215ENST00000553186 TBC1D22AQ8WUA7 517 aa23.13■■□□□ 1.29
RBFOX1-215ENST00000553186 RTFDC1Q9BY42 306 aaPredicted RBP23.13■■□□□ 1.29
RBFOX1-215ENST00000553186 WDR19Q8NEZ3 1342 aa23.13■■□□□ 1.29
RBFOX1-215ENST00000553186 FGD1P98174 961 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms