RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 CLRN2A0PK11 232 aa14.17□□□□□ -0.14
TMEM116-218ENST00000552839 UNCXA6NJT0 531 aa14.17□□□□□ -0.14
TMEM116-218ENST00000552839 USP2O75604 605 aaPredicted RBP14.17□□□□□ -0.14
TMEM116-218ENST00000552839 FXR1P51114 621 aaKnown RBP eCLIP14.17□□□□□ -0.14
TMEM116-218ENST00000552839 MVPQ14764 893 aaKnown RBP14.17□□□□□ -0.14
TMEM116-218ENST00000552839 CFAP100Q494V2 611 aa14.17□□□□□ -0.14
TMEM116-218ENST00000552839 PRMT6Q96LA8 375 aaPredicted RBP14.17□□□□□ -0.14
TMEM116-218ENST00000552839 PTPN18Q99952 460 aa14.17□□□□□ -0.14
TMEM116-218ENST00000552839 EFCC1Q9HA90 598 aa14.17□□□□□ -0.14
TMEM116-218ENST00000552839 AOX1Q06278 1338 aa14.16□□□□□ -0.14
TMEM116-218ENST00000552839 TESPA1A2RU30 521 aaPredicted RBP14.16□□□□□ -0.14
TMEM116-218ENST00000552839 F8W031 263 aaPredicted RBP14.16□□□□□ -0.14
TMEM116-218ENST00000552839 CSF1RP07333 972 aa14.16□□□□□ -0.14
TMEM116-218ENST00000552839 RLBP1P12271 317 aa14.16□□□□□ -0.14
TMEM116-218ENST00000552839 KCNJ4P48050 445 aa14.16□□□□□ -0.14
TMEM116-218ENST00000552839 SP3Q02447 781 aa14.16□□□□□ -0.14
TMEM116-218ENST00000552839 SUPT20HL1Q3ZLR7 823 aa14.16□□□□□ -0.14
TMEM116-218ENST00000552839 OTUD7BQ6GQQ9 843 aa14.16□□□□□ -0.14
TMEM116-218ENST00000552839 CENPFP49454 3210 aa14.16□□□□□ -0.14
TMEM116-218ENST00000552839 SPDYE2BA6NHP3 402 aa14.15□□□□□ -0.14
TMEM116-218ENST00000552839 MYO1BO43795 1136 aa14.15□□□□□ -0.14
TMEM116-218ENST00000552839 TAF5LO75529 589 aa14.15□□□□□ -0.14
TMEM116-218ENST00000552839 SPDYE6P0CI01 402 aa14.15□□□□□ -0.14
TMEM116-218ENST00000552839 IREB2P48200 963 aaKnown RBP14.15□□□□□ -0.14
TMEM116-218ENST00000552839 CASP7P55210 303 aa14.15□□□□□ -0.14
TMEM116-218ENST00000552839 C20orf194Q5TEA3 1177 aa14.15□□□□□ -0.14
TMEM116-218ENST00000552839 C15orf52Q6ZUT6 534 aaKnown RBP14.15□□□□□ -0.14
TMEM116-218ENST00000552839 HELBQ8NG08 1087 aaPredicted RBP14.15□□□□□ -0.14
TMEM116-218ENST00000552839 VEZTQ9HBM0 779 aa14.15□□□□□ -0.14
TMEM116-218ENST00000552839 GNAI2P04899 355 aa14.14□□□□□ -0.15
TMEM116-218ENST00000552839 IRX6P78412 446 aaPredicted RBP14.14□□□□□ -0.15
TMEM116-218ENST00000552839 RASA3Q14644 834 aa14.14□□□□□ -0.15
TMEM116-218ENST00000552839 TAF7LQ5H9L4 462 aa14.14□□□□□ -0.15
TMEM116-218ENST00000552839 ANKRD13AQ8IZ07 590 aa14.14□□□□□ -0.15
TMEM116-218ENST00000552839 MEIS3Q99687 375 aa14.14□□□□□ -0.15
TMEM116-218ENST00000552839 BRCA2P51587 3418 aa14.13□□□□□ -0.15
TMEM116-218ENST00000552839 IL1R1P14778 569 aa14.13□□□□□ -0.15
TMEM116-218ENST00000552839 FKBP1AP62942 108 aaKnown RBP14.13□□□□□ -0.15
TMEM116-218ENST00000552839 OPTNQ96CV9 577 aa14.13□□□□□ -0.15
TMEM116-218ENST00000552839 ZNF333Q96JL9 665 aa14.13□□□□□ -0.15
TMEM116-218ENST00000552839 MS4A4AQ96JQ5 239 aa14.13□□□□□ -0.15
TMEM116-218ENST00000552839 CRBNQ96SW2 442 aa14.13□□□□□ -0.15
TMEM116-218ENST00000552839 TMEM106CQ9BVX2 250 aa14.13□□□□□ -0.15
TMEM116-218ENST00000552839 JAG2Q9Y219 1238 aa14.13□□□□□ -0.15
TMEM116-218ENST00000552839 ANKRD18BA2A2Z9 1011 aa14.12□□□□□ -0.15
TMEM116-218ENST00000552839 NBPF7P0C2Y1 421 aaPredicted RBP14.12□□□□□ -0.15
TMEM116-218ENST00000552839 RBM5P52756 815 aaKnown RBP eCLIP14.12□□□□□ -0.15
TMEM116-218ENST00000552839 ZNF804AQ7Z570 1209 aa14.12□□□□□ -0.15
TMEM116-218ENST00000552839 USP44Q9H0E7 712 aa14.12□□□□□ -0.15
TMEM116-218ENST00000552839 ELP3Q9H9T3 547 aa14.12□□□□□ -0.15
TMEM116-218ENST00000552839 COLQQ9Y215 455 aaPredicted RBP14.12□□□□□ -0.15
TMEM116-218ENST00000552839 LRRFIP2Q9Y608 721 aaKnown RBP14.12□□□□□ -0.15
TMEM116-218ENST00000552839 PTCH2Q9Y6C5 1203 aa14.12□□□□□ -0.15
TMEM116-218ENST00000552839 ZSWIM8A7E2V4 1837 aa14.12□□□□□ -0.15
TMEM116-218ENST00000552839 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
TMEM116-218ENST00000552839 SUCLG2Q96I99 432 aa14.11□□□□□ -0.15
TMEM116-218ENST00000552839 C1orf115Q9H7X2 142 aa14.11□□□□□ -0.15
TMEM116-218ENST00000552839 ARAP2Q8WZ64 1704 aa14.1□□□□□ -0.15
TMEM116-218ENST00000552839 FOXO4P98177 505 aa14.1□□□□□ -0.15
TMEM116-218ENST00000552839 TAF1CQ15572 869 aaPredicted RBP14.1□□□□□ -0.15
TMEM116-218ENST00000552839 SLC9C1Q4G0N8 1177 aa14.1□□□□□ -0.15
TMEM116-218ENST00000552839 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.1□□□□□ -0.15
TMEM116-218ENST00000552839 NBPF11Q86T75 865 aa14.1□□□□□ -0.15
TMEM116-218ENST00000552839 CDAN1Q8IWY9 1227 aa14.1□□□□□ -0.15
TMEM116-218ENST00000552839 BRI3BPQ8WY22 251 aa14.1□□□□□ -0.15
TMEM116-218ENST00000552839 BICC1Q9H694 974 aaKnown RBP14.1□□□□□ -0.15
TMEM116-218ENST00000552839 ZNF70Q9UC06 446 aaPredicted RBP14.1□□□□□ -0.15
TMEM116-218ENST00000552839 UTYO14607 1347 aa14.1□□□□□ -0.15
TMEM116-218ENST00000552839 IFIT5Q13325 482 aaKnown RBP14.09□□□□□ -0.15
TMEM116-218ENST00000552839 CCDC57Q2TAC2 916 aa14.09□□□□□ -0.15
TMEM116-218ENST00000552839 SLC4A8Q2Y0W8 1093 aa14.09□□□□□ -0.15
TMEM116-218ENST00000552839 SPDYE2Q495Y8 402 aa14.09□□□□□ -0.15
TMEM116-218ENST00000552839 LMBR1LQ6UX01 489 aa14.09□□□□□ -0.15
TMEM116-218ENST00000552839 TEPSINQ96N21 525 aa14.09□□□□□ -0.15
TMEM116-218ENST00000552839 TDRD3Q9H7E2 651 aaKnown RBP14.09□□□□□ -0.15
TMEM116-218ENST00000552839 ZFYVE28Q9HCC9 887 aa14.09□□□□□ -0.15
TMEM116-218ENST00000552839 CCL15-CCL14A0A0B4J2E2 113 aa14.08□□□□□ -0.16
TMEM116-218ENST00000552839 HMMRO75330 724 aa14.08□□□□□ -0.16
TMEM116-218ENST00000552839 MYCP01106 439 aaPredicted RBP14.08□□□□□ -0.16
TMEM116-218ENST00000552839 TNFAIP1Q13829 316 aa14.08□□□□□ -0.16
TMEM116-218ENST00000552839 VGLL4Q14135 290 aa14.08□□□□□ -0.16
TMEM116-218ENST00000552839 ARHGEF6Q15052 776 aa14.08□□□□□ -0.16
TMEM116-218ENST00000552839 CCL15Q16663 113 aa14.08□□□□□ -0.16
TMEM116-218ENST00000552839 FAM43AQ8N2R8 423 aa14.08□□□□□ -0.16
TMEM116-218ENST00000552839 FAM205AQ6ZU69 1335 aa14.08□□□□□ -0.16
TMEM116-218ENST00000552839 TCP10L2B9ZVM9 353 aa14.07□□□□□ -0.16
TMEM116-218ENST00000552839 ZBTB7BO15156 539 aaPredicted RBP14.07□□□□□ -0.16
TMEM116-218ENST00000552839 GTF2A2P52657 109 aa14.07□□□□□ -0.16
TMEM116-218ENST00000552839 MAP3K9P80192 1104 aa14.07□□□□□ -0.16
TMEM116-218ENST00000552839 MFSD14BQ5SR56 506 aa14.07□□□□□ -0.16
TMEM116-218ENST00000552839 OTUD5Q96G74 571 aa14.07□□□□□ -0.16
TMEM116-218ENST00000552839 ZNF594Q96JF6 807 aaPredicted RBP14.07□□□□□ -0.16
TMEM116-218ENST00000552839 TMEM39BQ9GZU3 492 aa14.07□□□□□ -0.16
TMEM116-218ENST00000552839 SERPINA10Q9UK55 444 aa14.07□□□□□ -0.16
TMEM116-218ENST00000552839 TTF2Q9UNY4 1162 aaKnown RBP14.07□□□□□ -0.16
TMEM116-218ENST00000552839 H0YGN5 161 aa14.06□□□□□ -0.16
TMEM116-218ENST00000552839 SRGAP3O43295 1099 aa14.06□□□□□ -0.16
TMEM116-218ENST00000552839 OS9Q13438 667 aaPredicted RBP14.06□□□□□ -0.16
TMEM116-218ENST00000552839 AAMPQ13685 434 aa14.06□□□□□ -0.16
TMEM116-218ENST00000552839 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms