RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 LDHDQ86WU2 507 aa12.13□□□□□ -0.47
LETMD1-234ENST00000552645 GCC1Q96CN9 775 aa12.13□□□□□ -0.47
LETMD1-234ENST00000552645 LDHBP07195 334 aaKnown RBP12.12□□□□□ -0.47
LETMD1-234ENST00000552645 HIRAP54198 1017 aaPredicted RBP12.12□□□□□ -0.47
LETMD1-234ENST00000552645 ZNF280AP59817 542 aaPredicted RBP12.12□□□□□ -0.47
LETMD1-234ENST00000552645 MAP1SQ66K74 1059 aaPredicted RBP12.12□□□□□ -0.47
LETMD1-234ENST00000552645 TBC1D9Q6ZT07 1266 aa12.12□□□□□ -0.47
LETMD1-234ENST00000552645 SMC1BQ8NDV3 1235 aa12.12□□□□□ -0.47
LETMD1-234ENST00000552645 BACH2Q9BYV9 841 aa12.12□□□□□ -0.47
LETMD1-234ENST00000552645 NDUFB9Q9Y6M9 179 aa12.12□□□□□ -0.47
LETMD1-234ENST00000552645 MYH2Q9UKX2 1941 aa12.12□□□□□ -0.47
LETMD1-234ENST00000552645 PRDX5P30044 214 aa12.11□□□□□ -0.47
LETMD1-234ENST00000552645 DLGAP5Q15398 846 aa12.11□□□□□ -0.47
LETMD1-234ENST00000552645 CFAP100Q494V2 611 aa12.11□□□□□ -0.47
LETMD1-234ENST00000552645 CHADLQ6NUI6 762 aa12.11□□□□□ -0.47
LETMD1-234ENST00000552645 PCDHAC2Q9Y5I4 1007 aa12.11□□□□□ -0.47
LETMD1-234ENST00000552645 ASTN2O75129 1339 aaPredicted RBP12.11□□□□□ -0.47
LETMD1-234ENST00000552645 ZAP70P43403 619 aa12.11□□□□□ -0.47
LETMD1-234ENST00000552645 NBPF9Q3BBW0 867 aa12.11□□□□□ -0.47
LETMD1-234ENST00000552645 TSHZ3Q63HK5 1081 aa12.11□□□□□ -0.47
LETMD1-234ENST00000552645 DZIP1Q86YF9 867 aaKnown RBP12.11□□□□□ -0.47
LETMD1-234ENST00000552645 ZGPATQ8N5A5 531 aaKnown RBP12.11□□□□□ -0.47
LETMD1-234ENST00000552645 RBM46Q8TBY0 533 aaKnown RBP12.11□□□□□ -0.47
LETMD1-234ENST00000552645 GPATCH3Q96I76 525 aa12.11□□□□□ -0.47
LETMD1-234ENST00000552645 DNAJC2Q99543 621 aaKnown RBP12.11□□□□□ -0.47
LETMD1-234ENST00000552645 LNPKQ9C0E8 428 aa12.11□□□□□ -0.47
LETMD1-234ENST00000552645 RAI14Q9P0K7 980 aa12.11□□□□□ -0.47
LETMD1-234ENST00000552645 LRP2BPQ9P2M1 347 aa12.11□□□□□ -0.47
LETMD1-234ENST00000552645 SCAF8Q9UPN6 1271 aaKnown RBP12.11□□□□□ -0.47
LETMD1-234ENST00000552645 EIF5BO60841 1220 aaKnown RBP12.1□□□□□ -0.47
LETMD1-234ENST00000552645 PDE4AP27815 886 aa12.1□□□□□ -0.47
LETMD1-234ENST00000552645 CRKP46108 304 aa12.1□□□□□ -0.47
LETMD1-234ENST00000552645 DIXDC1Q155Q3 683 aa12.1□□□□□ -0.47
LETMD1-234ENST00000552645 SPTY2D1Q68D10 685 aaPredicted RBP12.1□□□□□ -0.47
LETMD1-234ENST00000552645 TEKT1Q969V4 418 aa12.1□□□□□ -0.47
LETMD1-234ENST00000552645 BOLA2Q9H3K6 86 aa12.1□□□□□ -0.47
LETMD1-234ENST00000552645 GGA3Q9NZ52 723 aa12.1□□□□□ -0.47
LETMD1-234ENST00000552645 ECM29Q5VYK3 1845 aa12.1□□□□□ -0.47
LETMD1-234ENST00000552645 MAST3O60307 1309 aa12.1□□□□□ -0.47
LETMD1-234ENST00000552645 WNT10BO00744 389 aa12.09□□□□□ -0.47
LETMD1-234ENST00000552645 ANGEL2Q5VTE6 544 aaKnown RBP12.09□□□□□ -0.47
LETMD1-234ENST00000552645 CNTROBQ8N137 903 aa12.09□□□□□ -0.47
LETMD1-234ENST00000552645 OTUD7AQ8TE49 926 aaPredicted RBP12.09□□□□□ -0.47
LETMD1-234ENST00000552645 DCPSQ96C86 337 aaKnown RBP12.09□□□□□ -0.47
LETMD1-234ENST00000552645 PDS5AQ29RF7 1337 aaKnown RBP12.09□□□□□ -0.47
LETMD1-234ENST00000552645 SALL1Q9NSC2 1324 aa12.09□□□□□ -0.47
LETMD1-234ENST00000552645 CLRN2A0PK11 232 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 MYO1BO43795 1136 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 CYP2E1P05181 493 aaPredicted RBP12.08□□□□□ -0.48
LETMD1-234ENST00000552645 C1QTNF8P60827 252 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 SMC5Q8IY18 1101 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 ZNF512BQ96KM6 892 aaPredicted RBP12.08□□□□□ -0.48
LETMD1-234ENST00000552645 PRMT6Q96LA8 375 aaPredicted RBP12.08□□□□□ -0.48
LETMD1-234ENST00000552645 ECHDC1Q9NTX5 307 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 SERPINA10Q9UK55 444 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 SUGT1Q9Y2Z0 365 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 SPDYE2BA6NHP3 402 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 GOLIM4O00461 696 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 IDH1O75874 414 aaKnown RBP12.08□□□□□ -0.48
LETMD1-234ENST00000552645 SPDYE6P0CI01 402 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 MMP14P50281 582 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 FSTL1Q12841 308 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 KRT26Q7Z3Y9 468 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 USP48Q86UV5 1035 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 ZC3H15Q8WU90 426 aaKnown RBP12.08□□□□□ -0.48
LETMD1-234ENST00000552645 GLIS2Q9BZE0 524 aaPredicted RBP12.08□□□□□ -0.48
LETMD1-234ENST00000552645 ANTXR1Q9H6X2 564 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 VEZTQ9HBM0 779 aa12.08□□□□□ -0.48
LETMD1-234ENST00000552645 PIH1D3Q9NQM4 214 aaKnown RBP12.08□□□□□ -0.48
LETMD1-234ENST00000552645 ADM5C9JUS6 153 aa12.07□□□□□ -0.48
LETMD1-234ENST00000552645 TRAF5O00463 557 aa12.07□□□□□ -0.48
LETMD1-234ENST00000552645 ATP5JP18859 108 aa12.07□□□□□ -0.48
LETMD1-234ENST00000552645 MX1P20591 662 aa12.07□□□□□ -0.48
LETMD1-234ENST00000552645 MECOMQ03112 1051 aa12.07□□□□□ -0.48
LETMD1-234ENST00000552645 DLK2Q6UY11 383 aa12.07□□□□□ -0.48
LETMD1-234ENST00000552645 CHD1LQ86WJ1 897 aa12.07□□□□□ -0.48
LETMD1-234ENST00000552645 SULF1Q8IWU6 871 aa12.07□□□□□ -0.48
LETMD1-234ENST00000552645 EDC3Q96F86 508 aaKnown RBP12.07□□□□□ -0.48
LETMD1-234ENST00000552645 TDRD3Q9H7E2 651 aaKnown RBP12.07□□□□□ -0.48
LETMD1-234ENST00000552645 ZNF408Q9H9D4 720 aa12.07□□□□□ -0.48
LETMD1-234ENST00000552645 AK9Q5TCS8 1911 aa12.07□□□□□ -0.48
LETMD1-234ENST00000552645 AOX1Q06278 1338 aa12.07□□□□□ -0.48
LETMD1-234ENST00000552645 MAST2Q6P0Q8 1798 aa12.06□□□□□ -0.48
LETMD1-234ENST00000552645 MAP4K4O95819 1239 aaPredicted RBP12.06□□□□□ -0.48
LETMD1-234ENST00000552645 NUCB1Q02818 461 aa12.06□□□□□ -0.48
LETMD1-234ENST00000552645 FMR1Q06787 632 aaKnown RBP eCLIP12.06□□□□□ -0.48
LETMD1-234ENST00000552645 NFKBIBQ15653 356 aa12.06□□□□□ -0.48
LETMD1-234ENST00000552645 CDC37L1Q7L3B6 337 aa12.06□□□□□ -0.48
LETMD1-234ENST00000552645 SLF2Q8IX21 1173 aa12.06□□□□□ -0.48
LETMD1-234ENST00000552645 MYH7P12883 1935 aa12.06□□□□□ -0.48
LETMD1-234ENST00000552645 DOCK2Q92608 1830 aa12.05□□□□□ -0.48
LETMD1-234ENST00000552645 TRPM7Q96QT4 1865 aa12.05□□□□□ -0.48
LETMD1-234ENST00000552645 ZBTB22O15209 634 aa12.05□□□□□ -0.48
LETMD1-234ENST00000552645 CACNB3P54284 484 aa12.05□□□□□ -0.48
LETMD1-234ENST00000552645 GSTO1P78417 241 aa12.05□□□□□ -0.48
LETMD1-234ENST00000552645 HDLBPQ00341 1268 aaKnown RBP12.05□□□□□ -0.48
LETMD1-234ENST00000552645 TTF1Q15361 905 aaPredicted RBP12.05□□□□□ -0.48
LETMD1-234ENST00000552645 NAA16Q6N069 864 aaPredicted RBP12.05□□□□□ -0.48
LETMD1-234ENST00000552645 HHIPL2Q6UWX4 724 aa12.05□□□□□ -0.48
LETMD1-234ENST00000552645 MTMR14Q8NCE2 650 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms