RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 H7C1W4 665 aa8.77□□□□□ -1.01
PRPF40B-214ENST00000551320 CA12O43570 354 aa8.77□□□□□ -1.01
PRPF40B-214ENST00000551320 DDX58O95786 925 aaKnown RBP8.77□□□□□ -1.01
PRPF40B-214ENST00000551320 GCKRQ14397 625 aa8.77□□□□□ -1.01
PRPF40B-214ENST00000551320 LHX8Q68G74 356 aa8.77□□□□□ -1.01
PRPF40B-214ENST00000551320 TTLL5Q6EMB2 1281 aa8.77□□□□□ -1.01
PRPF40B-214ENST00000551320 CDAN1Q8IWY9 1227 aa8.77□□□□□ -1.01
PRPF40B-214ENST00000551320 WWC1Q8IX03 1113 aa8.77□□□□□ -1.01
PRPF40B-214ENST00000551320 AGBL3Q8NEM8 1001 aa8.77□□□□□ -1.01
PRPF40B-214ENST00000551320 ZNF296Q8WUU4 475 aaPredicted RBP8.77□□□□□ -1.01
PRPF40B-214ENST00000551320 BSDC1Q9NW68 430 aaPredicted RBP8.77□□□□□ -1.01
PRPF40B-214ENST00000551320 ZNF646O15015 1829 aaPredicted RBP8.76□□□□□ -1.01
PRPF40B-214ENST00000551320 CASP7P55210 303 aa8.76□□□□□ -1.01
PRPF40B-214ENST00000551320 CAP1Q01518 475 aa8.76□□□□□ -1.01
PRPF40B-214ENST00000551320 EXOSC9Q06265 439 aaKnown RBP8.76□□□□□ -1.01
PRPF40B-214ENST00000551320 CHRNDQ07001 517 aa8.76□□□□□ -1.01
PRPF40B-214ENST00000551320 FKBP5Q13451 457 aaPredicted RBP8.76□□□□□ -1.01
PRPF40B-214ENST00000551320 KHSRPQ92945 711 aaKnown RBP eCLIP8.76□□□□□ -1.01
PRPF40B-214ENST00000551320 CDC5LQ99459 802 aaKnown RBP8.76□□□□□ -1.01
PRPF40B-214ENST00000551320 STK31Q9BXU1 1019 aa8.76□□□□□ -1.01
PRPF40B-214ENST00000551320 ANGEL1Q9UNK9 670 aaKnown RBP8.76□□□□□ -1.01
PRPF40B-214ENST00000551320 IQSEC3Q9UPP2 1182 aaPredicted RBP8.76□□□□□ -1.01
PRPF40B-214ENST00000551320 HPS5Q9UPZ3 1129 aa8.76□□□□□ -1.01
PRPF40B-214ENST00000551320 ZNF804BA4D1E1 1349 aa8.76□□□□□ -1.01
PRPF40B-214ENST00000551320 OSBPP22059 807 aa8.75□□□□□ -1.01
PRPF40B-214ENST00000551320 IGHMBP2P38935 993 aaKnown RBP8.75□□□□□ -1.01
PRPF40B-214ENST00000551320 KCNJ4P48050 445 aa8.75□□□□□ -1.01
PRPF40B-214ENST00000551320 NEXNQ0ZGT2 675 aa8.75□□□□□ -1.01
PRPF40B-214ENST00000551320 FLIIQ13045 1269 aa8.75□□□□□ -1.01
PRPF40B-214ENST00000551320 GRIK5Q16478 980 aa8.75□□□□□ -1.01
PRPF40B-214ENST00000551320 ARSIQ5FYB1 569 aa8.75□□□□□ -1.01
PRPF40B-214ENST00000551320 PODNQ7Z5L7 613 aa8.75□□□□□ -1.01
PRPF40B-214ENST00000551320 GPIHBP1Q8IV16 184 aa8.75□□□□□ -1.01
PRPF40B-214ENST00000551320 ZNF710Q8N1W2 664 aa8.75□□□□□ -1.01
PRPF40B-214ENST00000551320 PUS3Q9BZE2 481 aaKnown RBP8.75□□□□□ -1.01
PRPF40B-214ENST00000551320 AKAP11Q9UKA4 1901 aa8.75□□□□□ -1.01
PRPF40B-214ENST00000551320 FANCIQ9NVI1 1328 aa8.75□□□□□ -1.01
PRPF40B-214ENST00000551320 MED23Q9ULK4 1368 aa8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 NUDT7P0C024 238 aa8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 GJA5P36382 358 aa8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 FOXO4P98177 505 aa8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 NBPF12Q5TAG4 269 aaPredicted RBP8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 CTU1Q7Z7A3 348 aaKnown RBP8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 DNAAF4Q8WXU2 420 aa8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 PRMT6Q96LA8 375 aaPredicted RBP8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 MPHOSPH8Q99549 860 aa8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 VEZTQ9HBM0 779 aa8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 ZSWIM6Q9HCJ5 1215 aa8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 CD209Q9NNX6 404 aa8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 HDAC9Q9UKV0 1011 aa8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 PSME4Q14997 1843 aa8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 IRS2Q9Y4H2 1338 aa8.74□□□□□ -1.01
PRPF40B-214ENST00000551320 SSC5DA1L4H1 1573 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 GPR25O00155 361 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 VAMP4O75379 141 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 MYCP01106 439 aaPredicted RBP8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 CSF1RP07333 972 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 CACNB3P54284 484 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 CALD1Q05682 793 aaKnown RBP8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 CFAP100Q494V2 611 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 STRIP1Q5VSL9 837 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 GPR153Q6NV75 609 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 LMBR1LQ6UX01 489 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 OGFOD1Q8N543 542 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 COA1Q9GZY4 146 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 DEFB129Q9H1M3 183 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 MRS2Q9HD23 443 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 SAGE1Q9NXZ1 904 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 BRCA2P51587 3418 aa8.73□□□□□ -1.01
PRPF40B-214ENST00000551320 MYH3P11055 1940 aa8.72□□□□□ -1.01
PRPF40B-214ENST00000551320 PAPPA2Q9BXP8 1791 aa8.72□□□□□ -1.01
PRPF40B-214ENST00000551320 IGF2BP3O00425 579 aaKnown RBP eCLIP8.72□□□□□ -1.01
PRPF40B-214ENST00000551320 SNPHO15079 494 aa8.72□□□□□ -1.01
PRPF40B-214ENST00000551320 GYG1P46976 350 aa8.72□□□□□ -1.01
PRPF40B-214ENST00000551320 RBM5P52756 815 aaKnown RBP eCLIP8.72□□□□□ -1.01
PRPF40B-214ENST00000551320 DLGAP5Q15398 846 aa8.72□□□□□ -1.01
PRPF40B-214ENST00000551320 SPRYD7Q5W111 196 aa8.72□□□□□ -1.01
PRPF40B-214ENST00000551320 SLC4A10Q6U841 1118 aa8.72□□□□□ -1.01
PRPF40B-214ENST00000551320 KLHDC4Q8TBB5 520 aa8.72□□□□□ -1.01
PRPF40B-214ENST00000551320 ZBED3Q96IU2 234 aaPredicted RBP8.72□□□□□ -1.01
PRPF40B-214ENST00000551320 LEMD3Q9Y2U8 911 aa8.72□□□□□ -1.01
PRPF40B-214ENST00000551320 PITPNM2Q9BZ72 1349 aa8.72□□□□□ -1.01
PRPF40B-214ENST00000551320 ANKRD18BA2A2Z9 1011 aa8.71□□□□□ -1.02
PRPF40B-214ENST00000551320 HSP90B1P14625 803 aaKnown RBP8.71□□□□□ -1.02
PRPF40B-214ENST00000551320 BEND3Q5T5X7 828 aa8.71□□□□□ -1.02
PRPF40B-214ENST00000551320 FAM9BQ8IZU0 186 aa8.71□□□□□ -1.02
PRPF40B-214ENST00000551320 TDRD3Q9H7E2 651 aaKnown RBP8.71□□□□□ -1.02
PRPF40B-214ENST00000551320 ELP3Q9H9T3 547 aa8.71□□□□□ -1.02
PRPF40B-214ENST00000551320 TCP10L2B9ZVM9 353 aa8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 USP2O75604 605 aaPredicted RBP8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 TM4SF4P48230 202 aa8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 CHAF1AQ13111 956 aaPredicted RBP8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 IFIT5Q13325 482 aaKnown RBP8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 LDLRAD1Q5T700 205 aa8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 ARMC9Q7Z3E5 817 aa8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 LINS1Q8NG48 757 aa8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 CD99L2Q8TCZ2 262 aa8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 SLC10A4Q96EP9 437 aa8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 KAZALD1Q96I82 304 aa8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 SUCLG2Q96I99 432 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms