RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CACNB3P54284 484 aa14.56□□□□□ -0.08
PRPF40B-212ENST00000551111 SLFN5Q08AF3 891 aa14.56□□□□□ -0.08
PRPF40B-212ENST00000551111 SREBF2Q12772 1141 aa14.56□□□□□ -0.08
PRPF40B-212ENST00000551111 METTL24Q5JXM2 366 aa14.56□□□□□ -0.08
PRPF40B-212ENST00000551111 PTPN18Q99952 460 aa14.56□□□□□ -0.08
PRPF40B-212ENST00000551111 CFHR5Q9BXR6 569 aa14.56□□□□□ -0.08
PRPF40B-212ENST00000551111 TMEM39BQ9GZU3 492 aa14.56□□□□□ -0.08
PRPF40B-212ENST00000551111 PPP2R3BQ9Y5P8 575 aa14.56□□□□□ -0.08
PRPF40B-212ENST00000551111 MROH5Q6ZUA9 1318 aa14.56□□□□□ -0.08
PRPF40B-212ENST00000551111 FKTNO75072 461 aa14.55□□□□□ -0.08
PRPF40B-212ENST00000551111 RFX5P48382 616 aaPredicted RBP14.55□□□□□ -0.08
PRPF40B-212ENST00000551111 SUPT20HL1Q3ZLR7 823 aa14.55□□□□□ -0.08
PRPF40B-212ENST00000551111 NOM1Q5C9Z4 860 aaKnown RBP14.55□□□□□ -0.08
PRPF40B-212ENST00000551111 ELP3Q9H9T3 547 aa14.55□□□□□ -0.08
PRPF40B-212ENST00000551111 SERPINA10Q9UK55 444 aa14.55□□□□□ -0.08
PRPF40B-212ENST00000551111 BRCA2P51587 3418 aa14.55□□□□□ -0.08
PRPF40B-212ENST00000551111 MANSC4A6NHS7 340 aaPredicted RBP14.54□□□□□ -0.08
PRPF40B-212ENST00000551111 PDE8BO95263 885 aa14.54□□□□□ -0.08
PRPF40B-212ENST00000551111 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.54□□□□□ -0.08
PRPF40B-212ENST00000551111 PTPRCP08575 1304 aa14.53□□□□□ -0.08
PRPF40B-212ENST00000551111 E9PSI1 815 aa14.53□□□□□ -0.08
PRPF40B-212ENST00000551111 ZBTB48P10074 688 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-212ENST00000551111 FGFR2P21802 821 aa14.53□□□□□ -0.08
PRPF40B-212ENST00000551111 IREB2P48200 963 aaKnown RBP14.53□□□□□ -0.08
PRPF40B-212ENST00000551111 CRHR2Q13324 411 aa14.53□□□□□ -0.08
PRPF40B-212ENST00000551111 OPTNQ96CV9 577 aa14.53□□□□□ -0.08
PRPF40B-212ENST00000551111 MYH2Q9UKX2 1941 aa14.53□□□□□ -0.08
PRPF40B-212ENST00000551111 SLC34A2O95436 690 aa14.52□□□□□ -0.09
PRPF40B-212ENST00000551111 PKN2Q16513 984 aaKnown RBP14.52□□□□□ -0.09
PRPF40B-212ENST00000551111 FBXO46Q6PJ61 603 aaPredicted RBP14.52□□□□□ -0.09
PRPF40B-212ENST00000551111 ATG9AQ7Z3C6 839 aa14.52□□□□□ -0.09
PRPF40B-212ENST00000551111 VPS37DQ86XT2 251 aa14.52□□□□□ -0.09
PRPF40B-212ENST00000551111 ANKRD13AQ8IZ07 590 aa14.52□□□□□ -0.09
PRPF40B-212ENST00000551111 MS4A4AQ96JQ5 239 aa14.52□□□□□ -0.09
PRPF40B-212ENST00000551111 TESPA1A2RU30 521 aaPredicted RBP14.51□□□□□ -0.09
PRPF40B-212ENST00000551111 INHBEP58166 350 aa14.51□□□□□ -0.09
PRPF40B-212ENST00000551111 VGLL4Q14135 290 aa14.51□□□□□ -0.09
PRPF40B-212ENST00000551111 APOBEC3HQ6NTF7 200 aaKnown RBP14.51□□□□□ -0.09
PRPF40B-212ENST00000551111 OTOP1Q7RTM1 612 aa14.51□□□□□ -0.09
PRPF40B-212ENST00000551111 TRMT2AQ8IZ69 625 aaKnown RBP14.51□□□□□ -0.09
PRPF40B-212ENST00000551111 CD99L2Q8TCZ2 262 aa14.51□□□□□ -0.09
PRPF40B-212ENST00000551111 TRIM17Q9Y577 477 aa14.51□□□□□ -0.09
PRPF40B-212ENST00000551111 FRAT2O75474 233 aaPredicted RBP14.5□□□□□ -0.09
PRPF40B-212ENST00000551111 ALDH1A1P00352 501 aa14.5□□□□□ -0.09
PRPF40B-212ENST00000551111 CAVIN4Q5BKX8 364 aa14.5□□□□□ -0.09
PRPF40B-212ENST00000551111 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.5□□□□□ -0.09
PRPF40B-212ENST00000551111 BRI3BPQ8WY22 251 aa14.5□□□□□ -0.09
PRPF40B-212ENST00000551111 SIL1Q9H173 461 aa14.5□□□□□ -0.09
PRPF40B-212ENST00000551111 UNCXA6NJT0 531 aa14.49□□□□□ -0.09
PRPF40B-212ENST00000551111 EYA2O00167 538 aa14.49□□□□□ -0.09
PRPF40B-212ENST00000551111 HDLBPQ00341 1268 aaKnown RBP14.49□□□□□ -0.09
PRPF40B-212ENST00000551111 TNFAIP1Q13829 316 aa14.49□□□□□ -0.09
PRPF40B-212ENST00000551111 TEKT1Q969V4 418 aa14.49□□□□□ -0.09
PRPF40B-212ENST00000551111 SMC4Q9NTJ3 1288 aa14.49□□□□□ -0.09
PRPF40B-212ENST00000551111 RBBP6Q7Z6E9 1792 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-212ENST00000551111 POTEFA5A3E0 1075 aa14.48□□□□□ -0.09
PRPF40B-212ENST00000551111 MAP3K9P80192 1104 aa14.48□□□□□ -0.09
PRPF40B-212ENST00000551111 PUM3Q15397 648 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-212ENST00000551111 ALDH1L2Q3SY69 923 aa14.48□□□□□ -0.09
PRPF40B-212ENST00000551111 FAM43AQ8N2R8 423 aa14.48□□□□□ -0.09
PRPF40B-212ENST00000551111 TBC1D22AQ8WUA7 517 aa14.48□□□□□ -0.09
PRPF40B-212ENST00000551111 ZKSCAN4Q969J2 545 aaPredicted RBP14.48□□□□□ -0.09
PRPF40B-212ENST00000551111 ZDHHC15Q96MV8 337 aa14.48□□□□□ -0.09
PRPF40B-212ENST00000551111 NOB1Q9ULX3 412 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-212ENST00000551111 PA2G4Q9UQ80 394 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-212ENST00000551111 IFIT1P09914 478 aaKnown RBP14.47□□□□□ -0.09
PRPF40B-212ENST00000551111 DIXDC1Q155Q3 683 aa14.47□□□□□ -0.09
PRPF40B-212ENST00000551111 OTUD5Q96G74 571 aa14.47□□□□□ -0.09
PRPF40B-212ENST00000551111 SNCAIPQ9Y6H5 919 aa14.47□□□□□ -0.09
PRPF40B-212ENST00000551111 CCL15-CCL14A0A0B4J2E2 113 aa14.46□□□□□ -0.09
PRPF40B-212ENST00000551111 TNNI2P48788 182 aa14.46□□□□□ -0.09
PRPF40B-212ENST00000551111 CCL15Q16663 113 aa14.46□□□□□ -0.09
PRPF40B-212ENST00000551111 MIGA2Q7L4E1 593 aa14.46□□□□□ -0.09
PRPF40B-212ENST00000551111 LPIN2Q92539 896 aa14.46□□□□□ -0.09
PRPF40B-212ENST00000551111 LRRFIP2Q9Y608 721 aaKnown RBP14.46□□□□□ -0.09
PRPF40B-212ENST00000551111 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.46□□□□□ -0.09
PRPF40B-212ENST00000551111 KIF16BQ96L93 1317 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 SLC5A1P13866 664 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 PRDX5P30044 214 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 ADORA1P30542 326 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 PHKA1P46020 1223 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 SP3Q02447 781 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 NFIAQ12857 509 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 HHIPL2Q6UWX4 724 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 ZFPM1Q8IX07 1006 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 WRNIP1Q96S55 665 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 MEIS3Q99687 375 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 MRIQ9BWK5 157 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 TNNQ9UQP3 1299 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 PTPN22Q9Y2R2 807 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 DAGLAQ9Y4D2 1042 aa14.45□□□□□ -0.1
PRPF40B-212ENST00000551111 MYO5AQ9Y4I1 1855 aaKnown RBP14.44□□□□□ -0.1
PRPF40B-212ENST00000551111 DOCK2Q92608 1830 aa14.44□□□□□ -0.1
PRPF40B-212ENST00000551111 SPDYE5A6NIY4 337 aa14.44□□□□□ -0.1
PRPF40B-212ENST00000551111 IRF6O14896 467 aa14.44□□□□□ -0.1
PRPF40B-212ENST00000551111 UBTFL1P0CB47 393 aaPredicted RBP14.44□□□□□ -0.1
PRPF40B-212ENST00000551111 SLURP2P0DP57 97 aa14.44□□□□□ -0.1
PRPF40B-212ENST00000551111 INPP5BP32019 993 aa14.44□□□□□ -0.1
PRPF40B-212ENST00000551111 TCP10Q12799 353 aa14.44□□□□□ -0.1
PRPF40B-212ENST00000551111 OTUD7BQ6GQQ9 843 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms