RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 UTP4Q969X6 686 aaKnown RBP7.65□□□□□ -1.18
RAB3IP-214ENST00000550847 BCO2Q9BYV7 579 aa7.65□□□□□ -1.18
RAB3IP-214ENST00000550847 RAXQ9Y2V3 346 aa7.65□□□□□ -1.18
RAB3IP-214ENST00000550847 P4HBP07237 508 aaKnown RBP7.64□□□□□ -1.19
RAB3IP-214ENST00000550847 DRD2P14416 443 aa7.64□□□□□ -1.19
RAB3IP-214ENST00000550847 ZNF157P51786 506 aaPredicted RBP7.64□□□□□ -1.19
RAB3IP-214ENST00000550847 FCGRTP55899 365 aa7.64□□□□□ -1.19
RAB3IP-214ENST00000550847 PTPN12Q05209 780 aaKnown RBP7.64□□□□□ -1.19
RAB3IP-214ENST00000550847 UVSSAQ2YD98 709 aa7.64□□□□□ -1.19
RAB3IP-214ENST00000550847 TMCO4Q5TGY1 634 aa7.64□□□□□ -1.19
RAB3IP-214ENST00000550847 NXPE4Q6UWF7 544 aa7.64□□□□□ -1.19
RAB3IP-214ENST00000550847 FAM20CQ8IXL6 584 aa7.64□□□□□ -1.19
RAB3IP-214ENST00000550847 HMX2A2RU54 273 aa7.63□□□□□ -1.19
RAB3IP-214ENST00000550847 DHX15O43143 795 aaKnown RBP7.63□□□□□ -1.19
RAB3IP-214ENST00000550847 FDX2Q6P4F2 183 aa7.63□□□□□ -1.19
RAB3IP-214ENST00000550847 SMG8Q8ND04 991 aaKnown RBP7.63□□□□□ -1.19
RAB3IP-214ENST00000550847 C7orf69Q9H7B7 122 aa7.63□□□□□ -1.19
RAB3IP-214ENST00000550847 TRAK1Q9UPV9 953 aa7.63□□□□□ -1.19
RAB3IP-214ENST00000550847 BMP3P12645 472 aa7.62□□□□□ -1.19
RAB3IP-214ENST00000550847 POU4F3Q15319 338 aa7.62□□□□□ -1.19
RAB3IP-214ENST00000550847 SGO2Q562F6 1265 aa7.62□□□□□ -1.19
RAB3IP-214ENST00000550847 EXOSC6Q5RKV6 272 aaKnown RBP7.62□□□□□ -1.19
RAB3IP-214ENST00000550847 NUTM2GQ5VZR2 741 aa7.62□□□□□ -1.19
RAB3IP-214ENST00000550847 ZSCAN29Q8IWY8 852 aaPredicted RBP7.62□□□□□ -1.19
RAB3IP-214ENST00000550847 TRIM42Q8IWZ5 723 aa7.62□□□□□ -1.19
RAB3IP-214ENST00000550847 C3orf58Q8NDZ4 430 aa7.62□□□□□ -1.19
RAB3IP-214ENST00000550847 SUGCTQ9HAC7 445 aa7.62□□□□□ -1.19
RAB3IP-214ENST00000550847 NLRP2Q9NX02 1062 aa7.62□□□□□ -1.19
RAB3IP-214ENST00000550847 RPS26P11Q5JNZ5 115 aaPredicted RBP7.61□□□□□ -1.19
RAB3IP-214ENST00000550847 XP32Q5T750 250 aa7.61□□□□□ -1.19
RAB3IP-214ENST00000550847 DTHD1Q6ZMT9 781 aa7.61□□□□□ -1.19
RAB3IP-214ENST00000550847 SND1Q7KZF4 910 aaKnown RBP eCLIP7.61□□□□□ -1.19
RAB3IP-214ENST00000550847 C12orf50Q8NA57 414 aaPredicted RBP7.61□□□□□ -1.19
RAB3IP-214ENST00000550847 OSBPL7Q9BZF2 842 aa7.61□□□□□ -1.19
RAB3IP-214ENST00000550847 STOML1Q9UBI4 398 aa7.61□□□□□ -1.19
RAB3IP-214ENST00000550847 SART1O43290 800 aaKnown RBP7.6□□□□□ -1.19
RAB3IP-214ENST00000550847 CYP11A1P05108 521 aa7.6□□□□□ -1.19
RAB3IP-214ENST00000550847 MFAP1P55081 439 aaKnown RBP7.6□□□□□ -1.19
RAB3IP-214ENST00000550847 C2CD4AQ8NCU7 369 aaPredicted RBP7.6□□□□□ -1.19
RAB3IP-214ENST00000550847 STK35Q8TDR2 534 aa7.6□□□□□ -1.19
RAB3IP-214ENST00000550847 PATL2C9JE40 543 aaKnown RBP7.59□□□□□ -1.19
RAB3IP-214ENST00000550847 ADH5P11766 374 aa7.59□□□□□ -1.19
RAB3IP-214ENST00000550847 CDPF1Q6NVV7 123 aa7.59□□□□□ -1.19
RAB3IP-214ENST00000550847 BEND4Q6ZU67 534 aa7.59□□□□□ -1.19
RAB3IP-214ENST00000550847 WDR89Q96FK6 387 aaPredicted RBP7.59□□□□□ -1.19
RAB3IP-214ENST00000550847 GZF1Q9H116 711 aaPredicted RBP7.59□□□□□ -1.19
RAB3IP-214ENST00000550847 KCNF1Q9H3M0 494 aa7.59□□□□□ -1.19
RAB3IP-214ENST00000550847 CYP4F12Q9HCS2 524 aa7.59□□□□□ -1.19
RAB3IP-214ENST00000550847 RNF19AQ9NV58 838 aa7.59□□□□□ -1.19
RAB3IP-214ENST00000550847 IGLV1-40P01703 118 aa7.58□□□□□ -1.2
RAB3IP-214ENST00000550847 MAP4P27816 1152 aaKnown RBP7.58□□□□□ -1.2
RAB3IP-214ENST00000550847 SOX4Q06945 474 aaPredicted RBP7.58□□□□□ -1.2
RAB3IP-214ENST00000550847 SHISA5Q8N114 240 aa7.58□□□□□ -1.2
RAB3IP-214ENST00000550847 FBF1Q8TES7 1133 aa7.58□□□□□ -1.2
RAB3IP-214ENST00000550847 FAM83CQ9BQN1 747 aa7.58□□□□□ -1.2
RAB3IP-214ENST00000550847 CORO1BQ9BR76 489 aa7.58□□□□□ -1.2
RAB3IP-214ENST00000550847 ZC3H12CQ9C0D7 883 aaKnown RBP7.58□□□□□ -1.2
RAB3IP-214ENST00000550847 CCDC86Q9H6F5 360 aaKnown RBP7.58□□□□□ -1.2
RAB3IP-214ENST00000550847 AKAP2Q9Y2D5 859 aa7.58□□□□□ -1.2
RAB3IP-214ENST00000550847 ACTL7BQ9Y614 415 aa7.58□□□□□ -1.2
RAB3IP-214ENST00000550847 GAS2O43903 313 aaKnown RBP7.57□□□□□ -1.2
RAB3IP-214ENST00000550847 NFIAQ12857 509 aa7.57□□□□□ -1.2
RAB3IP-214ENST00000550847 ZDHHC13Q8IUH4 622 aa7.57□□□□□ -1.2
RAB3IP-214ENST00000550847 CLEC10AQ8IUN9 316 aa7.57□□□□□ -1.2
RAB3IP-214ENST00000550847 WDR18Q9BV38 432 aa7.57□□□□□ -1.2
RAB3IP-214ENST00000550847 RNF112Q9ULX5 631 aa7.57□□□□□ -1.2
RAB3IP-214ENST00000550847 HIF3AQ9Y2N7 669 aa7.57□□□□□ -1.2
RAB3IP-214ENST00000550847 SCO2A0A1W2PP80 73 aa7.56□□□□□ -1.2
RAB3IP-214ENST00000550847 ANKRD33BA6NCL7 494 aa7.56□□□□□ -1.2
RAB3IP-214ENST00000550847 AP3B2Q13367 1082 aa7.56□□□□□ -1.2
RAB3IP-214ENST00000550847 AKAP4Q5JQC9 854 aa7.56□□□□□ -1.2
RAB3IP-214ENST00000550847 RNF43Q68DV7 783 aa7.56□□□□□ -1.2
RAB3IP-214ENST00000550847 DNAJC14Q6Y2X3 702 aaPredicted RBP7.56□□□□□ -1.2
RAB3IP-214ENST00000550847 PDZD3Q86UT5 571 aa7.56□□□□□ -1.2
RAB3IP-214ENST00000550847 GPN3Q9UHW5 284 aaPredicted RBP7.56□□□□□ -1.2
RAB3IP-214ENST00000550847 ZNF862O60290 1169 aa7.55□□□□□ -1.2
RAB3IP-214ENST00000550847 AOC2O75106 756 aa7.55□□□□□ -1.2
RAB3IP-214ENST00000550847 FBXO24O75426 580 aa7.55□□□□□ -1.2
RAB3IP-214ENST00000550847 PAGE1O75459 146 aa7.55□□□□□ -1.2
RAB3IP-214ENST00000550847 TGFB1P01137 390 aa7.55□□□□□ -1.2
RAB3IP-214ENST00000550847 LDHBP07195 334 aaKnown RBP7.55□□□□□ -1.2
RAB3IP-214ENST00000550847 LIG1P18858 919 aa7.55□□□□□ -1.2
RAB3IP-214ENST00000550847 ARTNQ5T4W7 220 aa7.55□□□□□ -1.2
RAB3IP-214ENST00000550847 ALG1LQ6GMV1 187 aa7.55□□□□□ -1.2
RAB3IP-214ENST00000550847 FBLIM1Q8WUP2 373 aa7.55□□□□□ -1.2
RAB3IP-214ENST00000550847 FAM105AQ9NUU6 356 aa7.55□□□□□ -1.2
RAB3IP-214ENST00000550847 TMEM39AQ9NV64 488 aa7.55□□□□□ -1.2
RAB3IP-214ENST00000550847 PPP1R9AQ9ULJ8 1098 aa7.55□□□□□ -1.2
RAB3IP-214ENST00000550847 HYAL3O43820 417 aaPredicted RBP7.54□□□□□ -1.2
RAB3IP-214ENST00000550847 EIF4EBP3O60516 100 aaPredicted RBP7.54□□□□□ -1.2
RAB3IP-214ENST00000550847 MED26O95402 600 aa7.54□□□□□ -1.2
RAB3IP-214ENST00000550847 GSTP1P09211 210 aaKnown RBP7.54□□□□□ -1.2
RAB3IP-214ENST00000550847 XRCC5P13010 732 aaKnown RBP7.54□□□□□ -1.2
RAB3IP-214ENST00000550847 PDE3AQ14432 1141 aa7.54□□□□□ -1.2
RAB3IP-214ENST00000550847 MPRIPQ6WCQ1 1025 aa7.54□□□□□ -1.2
RAB3IP-214ENST00000550847 TPTE2Q6XPS3 522 aa7.54□□□□□ -1.2
RAB3IP-214ENST00000550847 DDX54Q8TDD1 881 aaKnown RBP7.54□□□□□ -1.2
RAB3IP-214ENST00000550847 PCDHGC5Q9Y5F6 944 aa7.54□□□□□ -1.2
RAB3IP-214ENST00000550847 PRR19A6NJB7 356 aa7.53□□□□□ -1.2
RAB3IP-214ENST00000550847 ENC1O14682 589 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms