RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 TRIM75PA6NK02 468 aa11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 MCM3P25205 808 aa11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 MTIF2P46199 727 aaKnown RBP11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 ADKP55263 362 aaKnown RBP11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 LUC7LQ9NQ29 371 aaKnown RBP11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 ATP10DQ9P241 1426 aa11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 AKR1B15C9JRZ8 316 aaPredicted RBP11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 KRT18P05783 430 aaKnown RBP11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 IBSPP21815 317 aaPredicted RBP11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 CCT6AP40227 531 aaKnown RBP11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 DRC1Q96MC2 740 aa11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 CTAGE1Q96RT6 745 aa11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 KCNF1Q9H3M0 494 aa11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 CLIC4Q9Y696 253 aa11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 OAS2P29728 719 aaKnown RBP11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 SOGA3Q5TF21 947 aa11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 KRT40Q6A162 431 aa11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 CAPZA3Q96KX2 299 aa11.66□□□□□ -0.54
SMARCC2-209ENST00000550164 WDHD1O75717 1129 aaPredicted RBP11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 SASH1O94885 1247 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 TRIM21P19474 475 aaKnown RBP11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 CCDC144BQ3MJ40 725 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 FKBP15Q5T1M5 1219 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 IGSF22Q8N9C0 903 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 NSUN7Q8NE18 718 aaKnown RBP11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 CABLES1Q8TDN4 633 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 PGBD1Q96JS3 809 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 TRIM47Q96LD4 638 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 DESI2Q9BSY9 194 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 ANGEL1Q9UNK9 670 aaKnown RBP11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 KDRP35968 1356 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 CCDC194A0A1B0GVG4 234 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 GPAA1O43292 621 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 LTKP29376 864 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 UBA7P41226 1012 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 PAFAH1B1P43034 410 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 CHMP4BP1P59074 171 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 GOLGA8FQ08AF8 430 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 GOLGA8DPQ0D2H9 430 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 NEK11Q8NG66 645 aa11.65□□□□□ -0.54
SMARCC2-209ENST00000550164 HSPD1P10809 573 aaKnown RBP11.65□□□□□ -0.55
SMARCC2-209ENST00000550164 RESTQ13127 1097 aa11.65□□□□□ -0.55
SMARCC2-209ENST00000550164 SLC4A8Q2Y0W8 1093 aa11.65□□□□□ -0.55
SMARCC2-209ENST00000550164 FBXO38Q6PIJ6 1188 aa11.65□□□□□ -0.55
SMARCC2-209ENST00000550164 RCOR1Q9UKL0 485 aa11.65□□□□□ -0.55
SMARCC2-209ENST00000550164 RPAP1Q9BWH6 1393 aaPredicted RBP11.65□□□□□ -0.55
SMARCC2-209ENST00000550164 ABCC3O15438 1527 aa11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 USO1O60763 962 aaKnown RBP11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 PDIA3P30101 505 aaKnown RBP11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 TDRD12Q587J7 1177 aaKnown RBP11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 CACNA2D4Q7Z3S7 1137 aa11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 PPP1R13BQ96KQ4 1090 aa11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 CABP5Q9NP86 173 aa11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 SLC4A4Q9Y6R1 1079 aa11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 IVLP07476 585 aa11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 ADD1P35611 737 aaKnown RBP11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 FAM89AQ96GI7 184 aa11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 DSCC1Q9BVC3 393 aa11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 KRT23Q9C075 422 aa11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 FANCLQ9NW38 375 aa11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 TBX22Q9Y458 520 aa11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 ADCY9O60503 1353 aa11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 USP8P40818 1118 aa11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 SAMD1Q6SPF0 538 aaPredicted RBP11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 DIS3L2Q8IYB7 885 aaKnown RBP11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 ZNF274Q96GC6 653 aaPredicted RBP11.64□□□□□ -0.55
SMARCC2-209ENST00000550164 CDC25BP30305 580 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 PIP4K2BP78356 416 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 SMC1AQ14683 1233 aaKnown RBP11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 ZNF827Q17R98 1081 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 PLCD3Q8N3E9 789 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 APPBP2Q92624 585 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 ATP2B2Q01814 1243 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 TOB2Q14106 344 aaPredicted RBP11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 HDXQ7Z353 690 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 XAGE2Q96GT9 111 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 VPS16Q9H269 839 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 USP27XA6NNY8 438 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 SPAG1Q07617 926 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 BICDL1Q6ZP65 573 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 MIGA1Q8NAN2 632 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 PLBD2Q8NHP8 589 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 SIRT1Q96EB6 747 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 CLIC6Q96NY7 704 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 HAUS7Q99871 368 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 RASSF4Q9H2L5 321 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 CNNM2Q9H8M5 875 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 CEP152O94986 1710 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 MLH3Q9UHC1 1453 aa11.63□□□□□ -0.55
SMARCC2-209ENST00000550164 AKR1B10O60218 316 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 CUTAO60888 179 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 UQCRFS1P1P0C7P4 283 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 IDEP14735 1019 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 LONRF3Q496Y0 759 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 FBXO18Q8NFZ0 1043 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 TAF4BQ92750 862 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 MAPK8IP1Q9UQF2 711 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 SEC31AO94979 1220 aaKnown RBP11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 ZAP70P43403 619 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 STAMQ92783 540 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms