RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 PRDX5P30044 214 aa16.5■□□□□ 0.23
SCARB1-209ENST00000545305 HSPA4P34932 840 aa16.5■□□□□ 0.23
SCARB1-209ENST00000545305 ANAPC15P60006 121 aa16.5■□□□□ 0.23
SCARB1-209ENST00000545305 MECOMQ03112 1051 aa16.5■□□□□ 0.23
SCARB1-209ENST00000545305 MFSD14BQ5SR56 506 aa16.5■□□□□ 0.23
SCARB1-209ENST00000545305 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
SCARB1-209ENST00000545305 NLGN2Q8NFZ4 835 aa16.5■□□□□ 0.23
SCARB1-209ENST00000545305 MAP4K1Q92918 833 aa16.5■□□□□ 0.23
SCARB1-209ENST00000545305 DBNDD1Q9H9R9 158 aa16.5■□□□□ 0.23
SCARB1-209ENST00000545305 RBM8AQ9Y5S9 174 aaKnown RBP16.5■□□□□ 0.23
SCARB1-209ENST00000545305 MBD4O95243 580 aa16.49■□□□□ 0.23
SCARB1-209ENST00000545305 NSUN4Q96CB9 384 aaKnown RBP16.49■□□□□ 0.23
SCARB1-209ENST00000545305 TAOK3Q9H2K8 898 aa16.49■□□□□ 0.23
SCARB1-209ENST00000545305 ARFGEF1Q9Y6D6 1849 aa16.49■□□□□ 0.23
SCARB1-209ENST00000545305 MAGEB6P1A0A0J9YX57 407 aa16.48■□□□□ 0.23
SCARB1-209ENST00000545305 LDHCP07864 332 aa16.48■□□□□ 0.23
SCARB1-209ENST00000545305 ZKSCAN1P17029 563 aaPredicted RBP16.48■□□□□ 0.23
SCARB1-209ENST00000545305 GNAT2P19087 354 aa16.48■□□□□ 0.23
SCARB1-209ENST00000545305 TTLL5Q6EMB2 1281 aa16.48■□□□□ 0.23
SCARB1-209ENST00000545305 SLF2Q8IX21 1173 aa16.48■□□□□ 0.23
SCARB1-209ENST00000545305 LARGE2Q8N3Y3 721 aa16.48■□□□□ 0.23
SCARB1-209ENST00000545305 NOL10Q9BSC4 688 aaKnown RBP16.48■□□□□ 0.23
SCARB1-209ENST00000545305 FHDC1Q9C0D6 1143 aaPredicted RBP16.48■□□□□ 0.23
SCARB1-209ENST00000545305 SUGT1Q9Y2Z0 365 aa16.48■□□□□ 0.23
SCARB1-209ENST00000545305 HSPD1P10809 573 aaKnown RBP16.47■□□□□ 0.23
SCARB1-209ENST00000545305 RABEP1Q15276 862 aa16.47■□□□□ 0.23
SCARB1-209ENST00000545305 ZNF277Q9NRM2 450 aaPredicted RBP16.47■□□□□ 0.23
SCARB1-209ENST00000545305 CTNNA3Q9UI47 895 aa16.47■□□□□ 0.23
SCARB1-209ENST00000545305 FER1L6Q2WGJ9 1857 aa16.47■□□□□ 0.23
SCARB1-209ENST00000545305 CHD4Q14839 1912 aa16.47■□□□□ 0.23
SCARB1-209ENST00000545305 USP17L3A6NCW0 530 aa16.46■□□□□ 0.23
SCARB1-209ENST00000545305 USP17L4A6NCW7 530 aa16.46■□□□□ 0.23
SCARB1-209ENST00000545305 IARSP41252 1262 aaKnown RBP16.46■□□□□ 0.23
SCARB1-209ENST00000545305 FKBP1AP62942 108 aaKnown RBP16.46■□□□□ 0.23
SCARB1-209ENST00000545305 VPS53Q5VIR6 699 aa16.46■□□□□ 0.23
SCARB1-209ENST00000545305 STRIP1Q5VSL9 837 aa16.46■□□□□ 0.23
SCARB1-209ENST00000545305 CREB3L3Q68CJ9 461 aa16.46■□□□□ 0.23
SCARB1-209ENST00000545305 USP17L1Q7RTZ2 530 aa16.46■□□□□ 0.23
SCARB1-209ENST00000545305 NIM1KQ8IY84 436 aa16.46■□□□□ 0.23
SCARB1-209ENST00000545305 MIGA1Q8NAN2 632 aa16.46■□□□□ 0.23
SCARB1-209ENST00000545305 STRBPQ96SI9 672 aaKnown RBP16.46■□□□□ 0.23
SCARB1-209ENST00000545305 ARMT1Q9H993 441 aa16.46■□□□□ 0.23
SCARB1-209ENST00000545305 LTBP3Q9NS15 1303 aa16.45■□□□□ 0.22
SCARB1-209ENST00000545305 APPP05067 770 aa16.45■□□□□ 0.22
SCARB1-209ENST00000545305 NECTIN1Q15223 517 aa16.45■□□□□ 0.22
SCARB1-209ENST00000545305 ADGRA1Q86SQ6 560 aa16.45■□□□□ 0.22
SCARB1-209ENST00000545305 CERS3Q8IU89 383 aa16.45■□□□□ 0.22
SCARB1-209ENST00000545305 LCORLQ8N3X6 602 aa16.45■□□□□ 0.22
SCARB1-209ENST00000545305 NACAP1Q9BZK3 213 aa16.45■□□□□ 0.22
SCARB1-209ENST00000545305 PALD1Q9ULE6 856 aa16.45■□□□□ 0.22
SCARB1-209ENST00000545305 SNX14Q9Y5W7 946 aa16.45■□□□□ 0.22
SCARB1-209ENST00000545305 RPAP1Q9BWH6 1393 aaPredicted RBP16.45■□□□□ 0.22
SCARB1-209ENST00000545305 MROH7-TTC4A0A0A0MT08 1334 aa16.45■□□□□ 0.22
SCARB1-209ENST00000545305 SLC27A2O14975 620 aa16.44■□□□□ 0.22
SCARB1-209ENST00000545305 BAG3O95817 575 aa16.44■□□□□ 0.22
SCARB1-209ENST00000545305 BECN1Q14457 450 aa16.44■□□□□ 0.22
SCARB1-209ENST00000545305 ZNF384Q8TF68 577 aa16.44■□□□□ 0.22
SCARB1-209ENST00000545305 IL17RAQ96F46 866 aa16.44■□□□□ 0.22
SCARB1-209ENST00000545305 KIF2CQ99661 725 aa16.44■□□□□ 0.22
SCARB1-209ENST00000545305 SLC4A4Q9Y6R1 1079 aa16.44■□□□□ 0.22
SCARB1-209ENST00000545305 PATL2C9JE40 543 aaKnown RBP16.43■□□□□ 0.22
SCARB1-209ENST00000545305 NFKBIEO00221 500 aa16.43■□□□□ 0.22
SCARB1-209ENST00000545305 KRT32Q14532 448 aa16.43■□□□□ 0.22
SCARB1-209ENST00000545305 GRIK5Q16478 980 aa16.43■□□□□ 0.22
SCARB1-209ENST00000545305 IMMTQ16891 758 aaKnown RBP16.43■□□□□ 0.22
SCARB1-209ENST00000545305 DACT2Q5SW24 774 aa16.43■□□□□ 0.22
SCARB1-209ENST00000545305 JDP2Q8WYK2 163 aa16.43■□□□□ 0.22
SCARB1-209ENST00000545305 KCNB2Q92953 911 aa16.43■□□□□ 0.22
SCARB1-209ENST00000545305 RIOK1Q9BRS2 568 aaKnown RBP16.43■□□□□ 0.22
SCARB1-209ENST00000545305 CRNKL1Q9BZJ0 848 aaKnown RBP16.43■□□□□ 0.22
SCARB1-209ENST00000545305 DAXXQ9UER7 740 aaPredicted RBP16.43■□□□□ 0.22
SCARB1-209ENST00000545305 MYH2Q9UKX2 1941 aa16.43■□□□□ 0.22
SCARB1-209ENST00000545305 ZMYM6O95789 1325 aa16.43■□□□□ 0.22
SCARB1-209ENST00000545305 PSME4Q14997 1843 aa16.42■□□□□ 0.22
SCARB1-209ENST00000545305 SCN9AQ15858 1988 aa16.42■□□□□ 0.22
SCARB1-209ENST00000545305 TDO2P48775 406 aa16.42■□□□□ 0.22
SCARB1-209ENST00000545305 DIXDC1Q155Q3 683 aa16.42■□□□□ 0.22
SCARB1-209ENST00000545305 ALX1Q15699 326 aa16.42■□□□□ 0.22
SCARB1-209ENST00000545305 CERS5Q8N5B7 392 aa16.42■□□□□ 0.22
SCARB1-209ENST00000545305 IL27Q8NEV9 243 aa16.42■□□□□ 0.22
SCARB1-209ENST00000545305 NAPBQ9H115 298 aa16.42■□□□□ 0.22
SCARB1-209ENST00000545305 AATFQ9NY61 560 aaKnown RBP eCLIP16.42■□□□□ 0.226e-8■■■□□ 16.7
SCARB1-209ENST00000545305 ZNRF3Q9ULT6 936 aa16.42■□□□□ 0.22
SCARB1-209ENST00000545305 TTF2Q9UNY4 1162 aaKnown RBP16.42■□□□□ 0.22
SCARB1-209ENST00000545305 MYO3BQ8WXR4 1341 aa16.42■□□□□ 0.22
SCARB1-209ENST00000545305 ZNF646O15015 1829 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-209ENST00000545305 YDJCA8MPS7 323 aa16.41■□□□□ 0.22
SCARB1-209ENST00000545305 F8W031 263 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-209ENST00000545305 FOXP2O15409 715 aa16.41■□□□□ 0.22
SCARB1-209ENST00000545305 ST18O60284 1047 aa16.41■□□□□ 0.22
SCARB1-209ENST00000545305 PLCG2P16885 1265 aa16.41■□□□□ 0.22
SCARB1-209ENST00000545305 PSMA5P28066 241 aa16.41■□□□□ 0.22
SCARB1-209ENST00000545305 DYNLL1P63167 89 aaKnown RBP16.41■□□□□ 0.22
SCARB1-209ENST00000545305 HSCBQ8IWL3 235 aa16.41■□□□□ 0.22
SCARB1-209ENST00000545305 RASEFQ8IZ41 740 aa16.41■□□□□ 0.22
SCARB1-209ENST00000545305 JAKMIP1Q96N16 626 aaKnown RBP16.41■□□□□ 0.22
SCARB1-209ENST00000545305 IPO9Q96P70 1041 aaKnown RBP16.41■□□□□ 0.22
SCARB1-209ENST00000545305 SYT17Q9BSW7 474 aa16.41■□□□□ 0.22
SCARB1-209ENST00000545305 GAKO14976 1311 aa16.41■□□□□ 0.22
SCARB1-209ENST00000545305 LAMA4Q16363 1823 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms