RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ATP6V0A2Q9Y487 856 aa11.1□□□□□ -0.63
GNE-206ENST00000543356 DLEC1Q9Y238 1755 aa11.09□□□□□ -0.63
GNE-206ENST00000543356 UFL1O94874 794 aa11.09□□□□□ -0.63
GNE-206ENST00000543356 GNAT2P19087 354 aa11.09□□□□□ -0.63
GNE-206ENST00000543356 ALDH1B1P30837 517 aa11.09□□□□□ -0.63
GNE-206ENST00000543356 ALX1Q15699 326 aa11.09□□□□□ -0.63
GNE-206ENST00000543356 IMMTQ16891 758 aaKnown RBP11.09□□□□□ -0.63
GNE-206ENST00000543356 STOX1Q6ZVD7 989 aa11.09□□□□□ -0.63
GNE-206ENST00000543356 MASTLQ96GX5 879 aa11.09□□□□□ -0.63
GNE-206ENST00000543356 SH2B1Q9NRF2 756 aaPredicted RBP11.09□□□□□ -0.63
GNE-206ENST00000543356 FRAT2O75474 233 aaPredicted RBP11.09□□□□□ -0.63
GNE-206ENST00000543356 MBD4O95243 580 aa11.09□□□□□ -0.63
GNE-206ENST00000543356 FGAP02671 866 aa11.09□□□□□ -0.63
GNE-206ENST00000543356 NFKBIBQ15653 356 aa11.09□□□□□ -0.63
GNE-206ENST00000543356 NOL8Q76FK4 1167 aaKnown RBP11.09□□□□□ -0.63
GNE-206ENST00000543356 TDRD7Q8NHU6 1098 aaKnown RBP11.09□□□□□ -0.63
GNE-206ENST00000543356 E7EWF7 191 aa11.08□□□□□ -0.64
GNE-206ENST00000543356 RAB3GAP1Q15042 981 aa11.08□□□□□ -0.64
GNE-206ENST00000543356 STYK1Q6J9G0 422 aa11.08□□□□□ -0.64
GNE-206ENST00000543356 CCDC125Q86Z20 511 aa11.08□□□□□ -0.64
GNE-206ENST00000543356 ZGPATQ8N5A5 531 aaKnown RBP11.08□□□□□ -0.64
GNE-206ENST00000543356 RAI14Q9P0K7 980 aa11.08□□□□□ -0.64
GNE-206ENST00000543356 ABCF2Q9UG63 623 aa11.08□□□□□ -0.64
GNE-206ENST00000543356 NSFL1CQ9UNZ2 370 aaKnown RBP11.08□□□□□ -0.64
GNE-206ENST00000543356 CYP7A1P22680 504 aa11.08□□□□□ -0.64
GNE-206ENST00000543356 TTLL5Q6EMB2 1281 aa11.08□□□□□ -0.64
GNE-206ENST00000543356 DEFB132Q7Z7B7 95 aa11.08□□□□□ -0.64
GNE-206ENST00000543356 TBC1D16Q8TBP0 767 aa11.08□□□□□ -0.64
GNE-206ENST00000543356 PATL2C9JE40 543 aaKnown RBP11.07□□□□□ -0.64
GNE-206ENST00000543356 IL1R1P14778 569 aa11.07□□□□□ -0.64
GNE-206ENST00000543356 NUCB2P80303 420 aa11.07□□□□□ -0.64
GNE-206ENST00000543356 SPTY2D1Q68D10 685 aaPredicted RBP11.07□□□□□ -0.64
GNE-206ENST00000543356 WDR66Q8TBY9 1149 aa11.07□□□□□ -0.64
GNE-206ENST00000543356 ARMT1Q9H993 441 aa11.07□□□□□ -0.64
GNE-206ENST00000543356 C10orf71Q711Q0 1435 aa11.07□□□□□ -0.64
GNE-206ENST00000543356 CHD4Q14839 1912 aa11.07□□□□□ -0.64
GNE-206ENST00000543356 A0A0G2JLW4 131 aa11.07□□□□□ -0.64
GNE-206ENST00000543356 ZNF213O14771 459 aa11.07□□□□□ -0.64
GNE-206ENST00000543356 COL9A3Q14050 684 aaPredicted RBP11.07□□□□□ -0.64
GNE-206ENST00000543356 TOB2Q14106 344 aaPredicted RBP11.07□□□□□ -0.64
GNE-206ENST00000543356 NAA16Q6N069 864 aaPredicted RBP11.07□□□□□ -0.64
GNE-206ENST00000543356 DHX32Q7L7V1 743 aaKnown RBP11.07□□□□□ -0.64
GNE-206ENST00000543356 LCORLQ8N3X6 602 aa11.07□□□□□ -0.64
GNE-206ENST00000543356 NSUN4Q96CB9 384 aaKnown RBP11.07□□□□□ -0.64
GNE-206ENST00000543356 ADGRA1Q86SQ6 560 aa11.06□□□□□ -0.64
GNE-206ENST00000543356 C2CD5Q86YS7 1000 aa11.06□□□□□ -0.64
GNE-206ENST00000543356 ZNF384Q8TF68 577 aa11.06□□□□□ -0.64
GNE-206ENST00000543356 EPB41L4AQ9HCS5 686 aaPredicted RBP11.06□□□□□ -0.64
GNE-206ENST00000543356 POLLQ9UGP5 575 aa11.06□□□□□ -0.64
GNE-206ENST00000543356 WDR19Q8NEZ3 1342 aa11.06□□□□□ -0.64
GNE-206ENST00000543356 MAGEB6P1A0A0J9YX57 407 aa11.06□□□□□ -0.64
GNE-206ENST00000543356 EXOSC10Q01780 885 aaKnown RBP11.06□□□□□ -0.64
GNE-206ENST00000543356 MECOMQ03112 1051 aa11.06□□□□□ -0.64
GNE-206ENST00000543356 CHAF1AQ13111 956 aaPredicted RBP11.06□□□□□ -0.64
GNE-206ENST00000543356 IFNL3Q8IZI9 196 aa11.06□□□□□ -0.64
GNE-206ENST00000543356 FBXL16Q8N461 479 aa11.06□□□□□ -0.64
GNE-206ENST00000543356 SLC16A10Q8TF71 515 aa11.06□□□□□ -0.64
GNE-206ENST00000543356 RIOK1Q9BRS2 568 aaKnown RBP11.06□□□□□ -0.64
GNE-206ENST00000543356 AGXT2Q9BYV1 514 aa11.06□□□□□ -0.64
GNE-206ENST00000543356 TPCN1Q9ULQ1 816 aa11.06□□□□□ -0.64
GNE-206ENST00000543356 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.06□□□□□ -0.64
GNE-206ENST00000543356 KIF13BQ9NQT8 1826 aa11.06□□□□□ -0.64
GNE-206ENST00000543356 GSG1L2A8MUP6 293 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 H0YIN7 160 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 LARGE1O95461 756 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 APPP05067 770 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 FAM43AQ8N2R8 423 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 GPR101Q96P66 508 aaPredicted RBP11.05□□□□□ -0.64
GNE-206ENST00000543356 NACAP1Q9BZK3 213 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 CD209Q9NNX6 404 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 SLC4A4Q9Y6R1 1079 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 LAMB1P07942 1786 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 ME3Q16798 604 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 Q6ZUG5 572 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 MIGA1Q8NAN2 632 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 NBPF3Q9H094 633 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 NAPBQ9H115 298 aa11.05□□□□□ -0.64
GNE-206ENST00000543356 C6orf229H3BNL8 230 aa11.04□□□□□ -0.64
GNE-206ENST00000543356 HAND2P61296 217 aa11.04□□□□□ -0.64
GNE-206ENST00000543356 MB21D2Q8IYB1 491 aaPredicted RBP11.04□□□□□ -0.64
GNE-206ENST00000543356 MPNDQ8N594 471 aa11.04□□□□□ -0.64
GNE-206ENST00000543356 NCOA7Q8NI08 942 aa11.04□□□□□ -0.64
GNE-206ENST00000543356 TNPO1Q92973 898 aaKnown RBP11.04□□□□□ -0.64
GNE-206ENST00000543356 TCEANC2Q96MN5 208 aa11.04□□□□□ -0.64
GNE-206ENST00000543356 TMX4Q9H1E5 349 aaPredicted RBP11.04□□□□□ -0.64
GNE-206ENST00000543356 PRDX5P30044 214 aa11.04□□□□□ -0.64
GNE-206ENST00000543356 ST3GAL1Q11201 340 aa11.04□□□□□ -0.64
GNE-206ENST00000543356 LARP6Q9BRS8 491 aaKnown RBP11.04□□□□□ -0.64
GNE-206ENST00000543356 SLX4Q8IY92 1834 aa11.04□□□□□ -0.64
GNE-206ENST00000543356 FAM205AQ6ZU69 1335 aa11.03□□□□□ -0.64
GNE-206ENST00000543356 PRKAB2O43741 272 aa11.03□□□□□ -0.64
GNE-206ENST00000543356 LDHBP07195 334 aaKnown RBP11.03□□□□□ -0.64
GNE-206ENST00000543356 GSTO1P78417 241 aa11.03□□□□□ -0.64
GNE-206ENST00000543356 GIMAP6Q6P9H5 292 aa11.03□□□□□ -0.64
GNE-206ENST00000543356 DPP8Q6V1X1 898 aaPredicted RBP11.03□□□□□ -0.64
GNE-206ENST00000543356 CLEC17AQ6ZS10 378 aa11.03□□□□□ -0.64
GNE-206ENST00000543356 RALYLQ86SE5 291 aaKnown RBP11.03□□□□□ -0.64
GNE-206ENST00000543356 DZIP1Q86YF9 867 aaKnown RBP11.03□□□□□ -0.64
GNE-206ENST00000543356 TBC1D10CQ8IV04 446 aa11.03□□□□□ -0.64
GNE-206ENST00000543356 CNKSR1Q969H4 720 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms