RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 TCRBV5S4A2TA0A5A2 114 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 TRDNQ13061 729 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 ALX1Q15699 326 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 SLC9C2Q5TAH2 1124 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 BRAPQ7Z569 592 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.65□□□□□ -1.18
PTPRO-208ENST00000542557 PIH1D3Q9NQM4 214 aaKnown RBP7.65□□□□□ -1.18
PTPRO-208ENST00000542557 SPTLC3Q9NUV7 552 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 RTEL1Q9NZ71 1219 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 A0A1W2PQ27 194 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 A0A1W2PQ64 194 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 A0A1W2PQD8 194 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 YEATS4O95619 227 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 PDE6AP16499 860 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 PHKA1P46020 1223 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 FAM160A1Q05DH4 1040 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 PARP10Q53GL7 1025 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 CCDC73Q6ZRK6 1079 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 CCAR1Q8IX12 1150 aaKnown RBP7.65□□□□□ -1.18
PTPRO-208ENST00000542557 ENGASEQ8NFI3 743 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 NBPF3Q9H094 633 aa7.65□□□□□ -1.18
PTPRO-208ENST00000542557 NAP1L2Q9ULW6 460 aaPredicted RBP7.65□□□□□ -1.18
PTPRO-208ENST00000542557 ZNF532Q9HCE3 1301 aa7.65□□□□□ -1.19
PTPRO-208ENST00000542557 SLC5A1P13866 664 aa7.65□□□□□ -1.19
PTPRO-208ENST00000542557 SNW1Q13573 536 aaKnown RBP7.65□□□□□ -1.19
PTPRO-208ENST00000542557 LUZP1Q86V48 1076 aa7.65□□□□□ -1.19
PTPRO-208ENST00000542557 KCTD17Q8N5Z5 321 aa7.65□□□□□ -1.19
PTPRO-208ENST00000542557 FBXO18Q8NFZ0 1043 aa7.65□□□□□ -1.19
PTPRO-208ENST00000542557 C8orf76Q96K31 380 aa7.65□□□□□ -1.19
PTPRO-208ENST00000542557 GPHNQ9NQX3 736 aaPredicted RBP7.65□□□□□ -1.19
PTPRO-208ENST00000542557 CCDC87Q9NVE4 849 aa7.65□□□□□ -1.19
PTPRO-208ENST00000542557 POLR3EQ9NVU0 708 aa7.65□□□□□ -1.19
PTPRO-208ENST00000542557 ANGEL1Q9UNK9 670 aaKnown RBP7.65□□□□□ -1.19
PTPRO-208ENST00000542557 R3HCC1Q9Y3T6 440 aaKnown RBP7.65□□□□□ -1.19
PTPRO-208ENST00000542557 COL5A3P25940 1745 aaPredicted RBP7.64□□□□□ -1.19
PTPRO-208ENST00000542557 CHD4Q14839 1912 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 SH2B2O14492 632 aaPredicted RBP7.64□□□□□ -1.19
PTPRO-208ENST00000542557 ZNF165P49910 485 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 STX1AQ16623 288 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 INTS5Q6P9B9 1019 aaKnown RBP7.64□□□□□ -1.19
PTPRO-208ENST00000542557 PLA2G4DQ86XP0 818 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 TBC1D10CQ8IV04 446 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 KCNG4Q8TDN1 519 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 SYTL4Q96C24 671 aaPredicted RBP7.64□□□□□ -1.19
PTPRO-208ENST00000542557 TMEM87BQ96K49 555 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 GOLPH3LQ9H4A5 285 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 TTC12Q9H892 705 aaPredicted RBP7.64□□□□□ -1.19
PTPRO-208ENST00000542557 ORC3Q9UBD5 711 aaPredicted RBP7.64□□□□□ -1.19
PTPRO-208ENST00000542557 ECM29Q5VYK3 1845 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 NID2Q14112 1375 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 SPATA31A1Q5TZJ5 1347 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 CPLX1O14810 134 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 KINO60870 393 aaKnown RBP7.64□□□□□ -1.19
PTPRO-208ENST00000542557 IDH1O75874 414 aaKnown RBP7.64□□□□□ -1.19
PTPRO-208ENST00000542557 CDKL5O76039 1030 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 NOLC1Q14978 699 aaKnown RBP eCLIP7.64□□□□□ -1.19
PTPRO-208ENST00000542557 ADALQ6DHV7 355 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 SARM1Q6SZW1 724 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 MRPS27Q92552 414 aaKnown RBP7.64□□□□□ -1.19
PTPRO-208ENST00000542557 STRBPQ96SI9 672 aaKnown RBP7.64□□□□□ -1.19
PTPRO-208ENST00000542557 UTP14AQ9BVJ6 771 aaKnown RBP7.64□□□□□ -1.19
PTPRO-208ENST00000542557 FTOQ9C0B1 505 aaKnown RBP eCLIP7.64□□□□□ -1.19
PTPRO-208ENST00000542557 WWC3Q9ULE0 1092 aa7.64□□□□□ -1.19
PTPRO-208ENST00000542557 BCL9LQ86UU0 1499 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 A0A1B0GUL6 1792 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 RRP9O43818 475 aaKnown RBP7.63□□□□□ -1.19
PTPRO-208ENST00000542557 CAMTA2O94983 1202 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 CDC25BP30305 580 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 ME1P48163 572 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 FOSBP53539 338 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 CEBPZQ03701 1054 aaKnown RBP7.63□□□□□ -1.19
PTPRO-208ENST00000542557 MAP3K12Q12852 859 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 SUSD4Q5VX71 490 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 SGMS1Q86VZ5 419 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 FSIP1Q8NA03 581 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 SPATA5Q8NB90 893 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 LINC00301Q8NCQ3 95 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 DNAJC25Q9H1X3 360 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 KCNF1Q9H3M0 494 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 CRKLP46109 303 aaKnown RBP7.63□□□□□ -1.19
PTPRO-208ENST00000542557 ZNF75DP51815 510 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 GUCY1B3Q02153 619 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 IQCB1Q15051 598 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 CCDC152Q4G0S7 254 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 MYSM1Q5VVJ2 828 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 FMR1NBQ8N0W7 255 aaPredicted RBP7.63□□□□□ -1.19
PTPRO-208ENST00000542557 KIAA1524Q8TCG1 905 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 AIDAQ96BJ3 306 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 ZNF830Q96NB3 372 aaPredicted RBP7.63□□□□□ -1.19
PTPRO-208ENST00000542557 PNPLA7Q6ZV29 1317 aa7.63□□□□□ -1.19
PTPRO-208ENST00000542557 PATL2C9JE40 543 aaKnown RBP7.62□□□□□ -1.19
PTPRO-208ENST00000542557 NTSR2O95665 410 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 METAP2P50579 478 aaKnown RBP eCLIP7.62□□□□□ -1.19
PTPRO-208ENST00000542557 KIF23Q02241 960 aaPredicted RBP7.62□□□□□ -1.19
PTPRO-208ENST00000542557 RASGRF1Q13972 1273 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 DDB1Q16531 1140 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 CPLX2Q6PUV4 134 aaKnown RBP7.62□□□□□ -1.19
PTPRO-208ENST00000542557 CYB5R4Q7L1T6 521 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 PRIMPOLQ96LW4 560 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 MPHOSPH8Q99549 860 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms