RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PACS2Q86VP3 889 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 BANK1Q8NDB2 785 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 PGBD1Q96JS3 809 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 RAI14Q9P0K7 980 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.05□□□□□ -1.44
PROM1-220ENST00000540805 USP16Q9Y5T5 823 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 DOT1LQ8TEK3 1739 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 BCL9LQ86UU0 1499 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 SPATA31A6Q5VVP1 1343 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 PI4KAP2A4QPH2 592 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 C6orf229H3BNL8 230 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 H2AFXP16104 143 aaPredicted RBP6.05□□□□□ -1.44
PROM1-220ENST00000540805 PLA2G4AP47712 749 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 CEBPZQ03701 1054 aaKnown RBP6.05□□□□□ -1.44
PROM1-220ENST00000540805 SLC39A6Q13433 755 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 PI4KAP1Q8N8J0 262 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 CCDC191Q8NCU4 936 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 KCND1Q9NSA2 647 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 ARGLU1Q9NWB6 273 aaPredicted RBP6.05□□□□□ -1.44
PROM1-220ENST00000540805 ANKRD36CQ5JPF3 1778 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 ATP5J2-PTCD1G3V325 749 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 RASSF4Q9H2L5 321 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 LRP2BPQ9P2M1 347 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 HIP1O00291 1037 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 SLC27A2O14975 620 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 MMP14P50281 582 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 CLCN6P51797 869 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 TPM4P67936 248 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 STK3Q13188 491 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 CCDC158Q5M9N0 1113 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 TTC39AQ5SRH9 613 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 TRMT1LQ7Z2T5 733 aaKnown RBP6.04□□□□□ -1.44
PROM1-220ENST00000540805 ZNF496Q96IT1 587 aaPredicted RBP6.04□□□□□ -1.44
PROM1-220ENST00000540805 ANO10Q9NW15 660 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 CFAP45Q9UL16 551 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 CASP7P55210 303 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 SAFBQ15424 915 aaKnown RBP eCLIP6.04□□□□□ -1.44
PROM1-220ENST00000540805 CCDC73Q6ZRK6 1079 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 CEP57L1Q8IYX8 460 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 EVI5LQ96CN4 794 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 L2HGDHQ9H9P8 463 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 ECHDC1Q9NTX5 307 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 FHOD1Q9Y613 1164 aa6.04□□□□□ -1.44
PROM1-220ENST00000540805 COL15A1P39059 1388 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 RPS6KB1P23443 525 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 RESTQ13127 1097 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 TTLL12Q14166 644 aaPredicted RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 CCDC150Q8NCX0 1101 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 NUP133Q8WUM0 1156 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 ZNF622Q969S3 477 aaKnown RBP eCLIP6.03□□□□□ -1.44
PROM1-220ENST00000540805 TCEANC2Q96MN5 208 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 ZSCAN16Q9H4T2 348 aaPredicted RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 GNL3LQ9NVN8 582 aaKnown RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 ANKIB1Q9P2G1 1089 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 COL5A3P25940 1745 aaPredicted RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 NWD2Q9ULI1 1742 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 NBPF26B4DH59 902 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 KINO60870 393 aaKnown RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 TUBB4AP04350 444 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 PNMA6AP0CW24 399 aaPredicted RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 TMEM132AQ24JP5 1023 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 SLC4A8Q2Y0W8 1093 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 ARHGAP29Q52LW3 1261 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 NBPF14Q5TI25 921 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 TTLL5Q6EMB2 1281 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 NBPF10Q6P3W6 841 aaKnown RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 TMCO3Q6UWJ1 677 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 NBPF15Q8N660 670 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 AOPEPQ8N6M6 819 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 MAP4K1Q92918 833 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 BRF1Q92994 677 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 IMPACTQ9P2X3 320 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 TRMT112Q9UI30 125 aaKnown RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.03□□□□□ -1.44
PROM1-220ENST00000540805 NMIQ13287 307 aaPredicted RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 PTPN21Q16825 1174 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 AACSQ86V21 672 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 DHX40Q8IX18 779 aaKnown RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 TXLNBQ8N3L3 684 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 CCDC82Q8N4S0 544 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 DNAAF4Q8WXU2 420 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 DCAF5Q96JK2 942 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 PPP1R13BQ96KQ4 1090 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 FMNL2Q96PY5 1086 aa6.03□□□□□ -1.44
PROM1-220ENST00000540805 NAT10Q9H0A0 1025 aaKnown RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 ALDH8A1Q9H2A2 487 aaPredicted RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 DDX21Q9NR30 783 aaKnown RBP eCLIP6.03□□□□□ -1.44
PROM1-220ENST00000540805 GEMIN8Q9NWZ8 242 aaKnown RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 DBF4Q9UBU7 674 aaPredicted RBP6.03□□□□□ -1.44
PROM1-220ENST00000540805 ZNF831Q5JPB2 1677 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 PSDA5PKW4 1024 aaPredicted RBP6.02□□□□□ -1.45
PROM1-220ENST00000540805 TOB2Q14106 344 aaPredicted RBP6.02□□□□□ -1.45
PROM1-220ENST00000540805 DHX8Q14562 1220 aaKnown RBP6.02□□□□□ -1.45
PROM1-220ENST00000540805 CWF19L2Q2TBE0 894 aaKnown RBP6.02□□□□□ -1.45
PROM1-220ENST00000540805 METTL24Q5JXM2 366 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 ICE2Q659A1 982 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 KRI1Q8N9T8 703 aaKnown RBP6.02□□□□□ -1.45
PROM1-220ENST00000540805 PRPF38AQ8NAV1 312 aaKnown RBP6.02□□□□□ -1.45
PROM1-220ENST00000540805 MYD88Q99836 296 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 CARD10Q9BWT7 1032 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms