RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 LDHBP07195 334 aaKnown RBP23.74■■□□□ 1.39
DDX55-207ENST00000540763 HIRAP54198 1017 aaPredicted RBP23.74■■□□□ 1.39
DDX55-207ENST00000540763 CHADLQ6NUI6 762 aa23.74■■□□□ 1.39
DDX55-207ENST00000540763 ZBED3Q96IU2 234 aaPredicted RBP23.74■■□□□ 1.39
DDX55-207ENST00000540763 EGFRP00533 1210 aa23.73■■□□□ 1.39
DDX55-207ENST00000540763 POTEIP0CG38 1075 aa23.73■■□□□ 1.39
DDX55-207ENST00000540763 POTEJP0CG39 1038 aa23.73■■□□□ 1.39
DDX55-207ENST00000540763 GPATCH3Q96I76 525 aa23.73■■□□□ 1.39
DDX55-207ENST00000540763 MYH7P12883 1935 aa23.72■■□□□ 1.39
DDX55-207ENST00000540763 F8W031 263 aaPredicted RBP23.72■■□□□ 1.39
DDX55-207ENST00000540763 ATP5JP18859 108 aa23.72■■□□□ 1.39
DDX55-207ENST00000540763 PRDX5P30044 214 aa23.72■■□□□ 1.39
DDX55-207ENST00000540763 GRIK5Q16478 980 aa23.72■■□□□ 1.39
DDX55-207ENST00000540763 ANKRD45Q5TZF3 282 aa23.72■■□□□ 1.39
DDX55-207ENST00000540763 PI16Q6UXB8 463 aa23.72■■□□□ 1.39
DDX55-207ENST00000540763 PITPNM2Q9BZ72 1349 aa23.72■■□□□ 1.39
DDX55-207ENST00000540763 TRPM7Q96QT4 1865 aa23.72■■□□□ 1.39
DDX55-207ENST00000540763 TTC41PQ6P2S7 1318 aa23.71■■□□□ 1.39
DDX55-207ENST00000540763 WNT10BO00744 389 aa23.71■■□□□ 1.39
DDX55-207ENST00000540763 DLGAP5Q15398 846 aa23.71■■□□□ 1.39
DDX55-207ENST00000540763 CFAP100Q494V2 611 aa23.71■■□□□ 1.39
DDX55-207ENST00000540763 HHIPL2Q6UWX4 724 aa23.71■■□□□ 1.39
DDX55-207ENST00000540763 TEKT1Q969V4 418 aa23.71■■□□□ 1.39
DDX55-207ENST00000540763 CLEC11AQ9Y240 323 aa23.71■■□□□ 1.39
DDX55-207ENST00000540763 SPDYE2BA6NHP3 402 aa23.7■■□□□ 1.38
DDX55-207ENST00000540763 SPDYE6P0CI01 402 aa23.7■■□□□ 1.38
DDX55-207ENST00000540763 CRKP46108 304 aa23.7■■□□□ 1.38
DDX55-207ENST00000540763 RBM26Q5T8P6 1007 aaKnown RBP23.7■■□□□ 1.38
DDX55-207ENST00000540763 TMED8Q6PL24 325 aaPredicted RBP23.7■■□□□ 1.38
DDX55-207ENST00000540763 ERICH6Q7L0X2 663 aa23.7■■□□□ 1.38
DDX55-207ENST00000540763 ECHDC1Q9NTX5 307 aa23.7■■□□□ 1.38
DDX55-207ENST00000540763 ABCF2Q9UG63 623 aa23.7■■□□□ 1.38
DDX55-207ENST00000540763 SALL3Q9BXA9 1300 aa23.69■■□□□ 1.38
DDX55-207ENST00000540763 CYP2E1P05181 493 aaPredicted RBP23.69■■□□□ 1.38
DDX55-207ENST00000540763 ZAP70P43403 619 aa23.69■■□□□ 1.38
DDX55-207ENST00000540763 COL13A1Q5TAT6 717 aaPredicted RBP23.69■■□□□ 1.38
DDX55-207ENST00000540763 SLF2Q8IX21 1173 aa23.69■■□□□ 1.38
DDX55-207ENST00000540763 ZDHHC15Q96MV8 337 aa23.69■■□□□ 1.38
DDX55-207ENST00000540763 NUCB1Q02818 461 aa23.68■■□□□ 1.38
DDX55-207ENST00000540763 TTF1Q15361 905 aaPredicted RBP23.68■■□□□ 1.38
DDX55-207ENST00000540763 ERICH6BQ5W0A0 696 aa23.68■■□□□ 1.38
DDX55-207ENST00000540763 DZIP1Q86YF9 867 aaKnown RBP23.68■■□□□ 1.38
DDX55-207ENST00000540763 SNRKQ9NRH2 765 aa23.68■■□□□ 1.38
DDX55-207ENST00000540763 PCNTO95613 3336 aa23.68■■□□□ 1.38
DDX55-207ENST00000540763 MYO1BO43795 1136 aa23.67■■□□□ 1.38
DDX55-207ENST00000540763 NBPF9Q3BBW0 867 aa23.67■■□□□ 1.38
DDX55-207ENST00000540763 CHD1LQ86WJ1 897 aa23.67■■□□□ 1.38
DDX55-207ENST00000540763 FAM163AQ96GL9 167 aaPredicted RBP23.67■■□□□ 1.38
DDX55-207ENST00000540763 HAUS7Q99871 368 aa23.67■■□□□ 1.38
DDX55-207ENST00000540763 GGA3Q9NZ52 723 aa23.67■■□□□ 1.38
DDX55-207ENST00000540763 GAKO14976 1311 aa23.66■■□□□ 1.38
DDX55-207ENST00000540763 MX1P20591 662 aa23.66■■□□□ 1.38
DDX55-207ENST00000540763 RBM5P52756 815 aaKnown RBP eCLIP23.66■■□□□ 1.384e-6■■□□□ 12.4
DDX55-207ENST00000540763 DCPSQ96C86 337 aaKnown RBP23.66■■□□□ 1.38
DDX55-207ENST00000540763 BCL11AQ9H165 835 aa23.66■■□□□ 1.38
DDX55-207ENST00000540763 LRP2BPQ9P2M1 347 aa23.66■■□□□ 1.38
DDX55-207ENST00000540763 ERC2O15083 957 aa23.65■■□□□ 1.38
DDX55-207ENST00000540763 GSTO1P78417 241 aa23.65■■□□□ 1.38
DDX55-207ENST00000540763 MAP1SQ66K74 1059 aaPredicted RBP23.65■■□□□ 1.38
DDX55-207ENST00000540763 TBC1D9Q6ZT07 1266 aa23.65■■□□□ 1.38
DDX55-207ENST00000540763 CDC37L1Q7L3B6 337 aa23.65■■□□□ 1.38
DDX55-207ENST00000540763 CNTROBQ8N137 903 aa23.65■■□□□ 1.38
DDX55-207ENST00000540763 NSUN4Q96CB9 384 aaKnown RBP23.65■■□□□ 1.38
DDX55-207ENST00000540763 ITGBL1O95965 494 aaPredicted RBP23.64■■□□□ 1.37
DDX55-207ENST00000540763 MECOMQ03112 1051 aa23.64■■□□□ 1.37
DDX55-207ENST00000540763 ANGEL2Q5VTE6 544 aaKnown RBP23.64■■□□□ 1.37
DDX55-207ENST00000540763 APOBEC3FQ8IUX4 373 aaKnown RBP23.64■■□□□ 1.37
DDX55-207ENST00000540763 PRMT6Q96LA8 375 aaPredicted RBP23.64■■□□□ 1.37
DDX55-207ENST00000540763 LNPKQ9C0E8 428 aa23.64■■□□□ 1.37
DDX55-207ENST00000540763 STAP2Q9UGK3 403 aa23.64■■□□□ 1.37
DDX55-207ENST00000540763 DAGLAQ9Y4D2 1042 aa23.64■■□□□ 1.37
DDX55-207ENST00000540763 AOX1Q06278 1338 aa23.63■■□□□ 1.37
DDX55-207ENST00000540763 PASKQ96RG2 1323 aa23.63■■□□□ 1.37
DDX55-207ENST00000540763 GLRX3O76003 335 aaKnown RBP23.63■■□□□ 1.37
DDX55-207ENST00000540763 LDHCP07864 332 aa23.63■■□□□ 1.37
DDX55-207ENST00000540763 HSPA1AP0DMV8 641 aaKnown RBP23.63■■□□□ 1.37
DDX55-207ENST00000540763 HSPA1BP0DMV9 641 aaKnown RBP23.63■■□□□ 1.37
DDX55-207ENST00000540763 DIXDC1Q155Q3 683 aa23.63■■□□□ 1.37
DDX55-207ENST00000540763 SPDYE2Q495Y8 402 aa23.63■■□□□ 1.37
DDX55-207ENST00000540763 BOLA2Q9H3K6 86 aa23.63■■□□□ 1.37
DDX55-207ENST00000540763 PIH1D3Q9NQM4 214 aaKnown RBP23.63■■□□□ 1.37
DDX55-207ENST00000540763 CREBZFQ9NS37 354 aa23.63■■□□□ 1.37
DDX55-207ENST00000540763 PAG1Q9NWQ8 432 aa23.63■■□□□ 1.37
DDX55-207ENST00000540763 RAI14Q9P0K7 980 aa23.63■■□□□ 1.37
DDX55-207ENST00000540763 MROH7-TTC4A0A0A0MT08 1334 aa23.62■■□□□ 1.37
DDX55-207ENST00000540763 ASTN2O75129 1339 aaPredicted RBP23.62■■□□□ 1.37
DDX55-207ENST00000540763 FOCADQ5VW36 1801 aa23.62■■□□□ 1.37
DDX55-207ENST00000540763 B4GALNT3Q6L9W6 998 aa23.62■■□□□ 1.37
DDX55-207ENST00000540763 APOBEC3HQ6NTF7 200 aaKnown RBP23.62■■□□□ 1.37
DDX55-207ENST00000540763 SULF1Q8IWU6 871 aa23.62■■□□□ 1.37
DDX55-207ENST00000540763 OTUD7AQ8TE49 926 aaPredicted RBP23.62■■□□□ 1.37
DDX55-207ENST00000540763 ZNF384Q8TF68 577 aa23.62■■□□□ 1.37
DDX55-207ENST00000540763 DNAJC2Q99543 621 aaKnown RBP23.62■■□□□ 1.37
DDX55-207ENST00000540763 PCDHAC2Q9Y5I4 1007 aa23.62■■□□□ 1.37
DDX55-207ENST00000540763 CDK5RAP2Q96SN8 1893 aa23.62■■□□□ 1.37
DDX55-207ENST00000540763 MAP3K12Q12852 859 aa23.61■■□□□ 1.37
DDX55-207ENST00000540763 CENPQQ7L2Z9 268 aaPredicted RBP23.61■■□□□ 1.37
DDX55-207ENST00000540763 KRT26Q7Z3Y9 468 aa23.61■■□□□ 1.37
DDX55-207ENST00000540763 PI4K2BQ8TCG2 481 aa23.61■■□□□ 1.37
DDX55-207ENST00000540763 ANTXR1Q9H6X2 564 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms