RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 GOLGA8BA8MQT2 603 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 MAP3K9P80192 1104 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 ANO1Q5XXA6 986 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 TOGARAM2Q6ZUX3 1019 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 FCHSD1Q86WN1 690 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 DBNDD2Q9BQY9 259 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 CACNA1FO60840 1977 aa14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 FANCGO15287 622 aa14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 WDHD1O75717 1129 aaPredicted RBP14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 HAND2P61296 217 aa14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 C1orf141Q5JVX7 400 aa14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 CPLX3Q8WVH0 158 aa14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 TNRQ92752 1358 aa14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 ROBO2Q9HCK4 1378 aa14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 BRD3Q15059 726 aa14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 NFATC2IPQ8NCF5 419 aa14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 FAN1Q9Y2M0 1017 aa14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 APPP05067 770 aa14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 ATP5JP18859 108 aa14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 CNNM3Q8NE01 707 aa14.74□□□□□ -0.05
SFSWAP-209ENST00000540469 E7EWF7 191 aa14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 KIF5CO60282 957 aa14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 MYCNP04198 464 aaPredicted RBP14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 TNNI3KQ59H18 835 aa14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 WWC2Q6AWC2 1192 aa14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 TEX2Q8IWB9 1127 aa14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 STK11IPQ8N1F8 1099 aa14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 JMYQ8N9B5 988 aa14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 IRX2Q9BZI1 471 aaPredicted RBP14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 FPGT-TNNI3KV9GXZ4 949 aa14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 CHD2O14647 1828 aaKnown RBP14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 KLF18A0A0U1RQI7 1052 aa14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 DRC1Q96MC2 740 aa14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 ACBD3Q9H3P7 528 aa14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 DEF6Q9H4E7 631 aa14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 GPHNQ9NQX3 736 aaPredicted RBP14.73□□□□□ -0.05
SFSWAP-209ENST00000540469 CCDC175P0C221 793 aa14.72□□□□□ -0.05
SFSWAP-209ENST00000540469 ICE2Q659A1 982 aa14.72□□□□□ -0.05
SFSWAP-209ENST00000540469 POLR3EQ9NVU0 708 aa14.72□□□□□ -0.05
SFSWAP-209ENST00000540469 SPATA31D1Q6ZQQ2 1576 aa14.72□□□□□ -0.05
SFSWAP-209ENST00000540469 PRAMEF22A3QJZ6 481 aa14.72□□□□□ -0.05
SFSWAP-209ENST00000540469 CMA1P23946 247 aa14.72□□□□□ -0.05
SFSWAP-209ENST00000540469 BRAPQ7Z569 592 aa14.72□□□□□ -0.05
SFSWAP-209ENST00000540469 MYD88Q99836 296 aa14.72□□□□□ -0.05
SFSWAP-209ENST00000540469 ZNF609O15014 1411 aa14.72□□□□□ -0.05
SFSWAP-209ENST00000540469 PLEKHA4Q9H4M7 779 aa14.72□□□□□ -0.05
SFSWAP-209ENST00000540469 COL15A1P39059 1388 aa14.72□□□□□ -0.05
SFSWAP-209ENST00000540469 RALYLQ86SE5 291 aaKnown RBP14.71□□□□□ -0.05
SFSWAP-209ENST00000540469 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
SFSWAP-209ENST00000540469 STX10O60499 249 aa14.71□□□□□ -0.05
SFSWAP-209ENST00000540469 ZNF569Q5MCW4 686 aa14.71□□□□□ -0.05
SFSWAP-209ENST00000540469 CCDC102BQ68D86 513 aa14.71□□□□□ -0.05
SFSWAP-209ENST00000540469 RSRC2Q7L4I2 434 aaKnown RBP14.71□□□□□ -0.05
SFSWAP-209ENST00000540469 ZNF274Q96GC6 653 aaPredicted RBP14.71□□□□□ -0.05
SFSWAP-209ENST00000540469 KAZALD1Q96I82 304 aa14.71□□□□□ -0.05
SFSWAP-209ENST00000540469 UBXN6Q9BZV1 441 aa14.71□□□□□ -0.05
SFSWAP-209ENST00000540469 PSD3Q9NYI0 1048 aa14.71□□□□□ -0.05
SFSWAP-209ENST00000540469 A0A0G2JLW4 131 aa14.71□□□□□ -0.06
SFSWAP-209ENST00000540469 POTEB2H3BUK9 544 aa14.71□□□□□ -0.06
SFSWAP-209ENST00000540469 N4BP1O75113 896 aaKnown RBP14.71□□□□□ -0.06
SFSWAP-209ENST00000540469 WASHC4Q2M389 1173 aa14.71□□□□□ -0.06
SFSWAP-209ENST00000540469 SPECC1LQ69YQ0 1117 aa14.71□□□□□ -0.06
SFSWAP-209ENST00000540469 SRGAP1Q7Z6B7 1085 aa14.71□□□□□ -0.06
SFSWAP-209ENST00000540469 PPFIBP1Q86W92 1011 aa14.71□□□□□ -0.06
SFSWAP-209ENST00000540469 CEP112Q8N8E3 955 aa14.71□□□□□ -0.06
SFSWAP-209ENST00000540469 TRMT44Q8IYL2 757 aaKnown RBP14.7□□□□□ -0.06
SFSWAP-209ENST00000540469 SIRT1Q96EB6 747 aa14.7□□□□□ -0.06
SFSWAP-209ENST00000540469 SUGCTQ9HAC7 445 aa14.7□□□□□ -0.06
SFSWAP-209ENST00000540469 HOOK1Q9UJC3 728 aaKnown RBP14.7□□□□□ -0.06
SFSWAP-209ENST00000540469 JRKLQ9Y4A0 524 aa14.7□□□□□ -0.06
SFSWAP-209ENST00000540469 FDPSP14324 419 aaKnown RBP14.7□□□□□ -0.06
SFSWAP-209ENST00000540469 SART3Q15020 963 aaKnown RBP14.7□□□□□ -0.06
SFSWAP-209ENST00000540469 NFE2L3Q9Y4A8 694 aa14.7□□□□□ -0.06
SFSWAP-209ENST00000540469 FOXR1Q6PIV2 292 aa14.7□□□□□ -0.06
SFSWAP-209ENST00000540469 KBTBD3Q8NAB2 608 aa14.7□□□□□ -0.06
SFSWAP-209ENST00000540469 EIF3CLB5ME19 914 aaKnown RBP14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 NOP2P46087 812 aaKnown RBP14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 MTF1Q14872 753 aa14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 CLIC6Q96NY7 704 aa14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 EIF3CQ99613 913 aaKnown RBP14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 ABCB6Q9NP58 842 aa14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 EID1Q9Y6B2 187 aa14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 GBP3Q9H0R5 595 aa14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 PCDHA5Q9Y5H7 936 aa14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 MROH7-TTC4A0A0A0MT08 1334 aa14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 MAGEA9P43362 315 aa14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 TRIM29Q14134 588 aa14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 PLEKHO1Q53GL0 409 aaPredicted RBP14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 SPECC1Q5M775 1068 aa14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 UBE3BQ7Z3V4 1068 aa14.69□□□□□ -0.06
SFSWAP-209ENST00000540469 AKAP12Q02952 1782 aa14.68□□□□□ -0.06
SFSWAP-209ENST00000540469 CUTAO60888 179 aa14.68□□□□□ -0.06
SFSWAP-209ENST00000540469 AKAP17AQ02040 695 aaKnown RBP14.68□□□□□ -0.06
SFSWAP-209ENST00000540469 EPHA10Q5JZY3 1008 aa14.68□□□□□ -0.06
SFSWAP-209ENST00000540469 PPM1EQ8WY54 764 aa14.68□□□□□ -0.06
SFSWAP-209ENST00000540469 PAG1Q9NWQ8 432 aa14.68□□□□□ -0.06
SFSWAP-209ENST00000540469 SOWAHDA6NJG2 315 aa14.68□□□□□ -0.06
SFSWAP-209ENST00000540469 PRC1O43663 620 aa14.68□□□□□ -0.06
SFSWAP-209ENST00000540469 HSPD1P10809 573 aaKnown RBP14.68□□□□□ -0.06
SFSWAP-209ENST00000540469 EXOSC10Q01780 885 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms