RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 NBPF3Q9H094 633 aa13.5□□□□□ -0.25
C11orf54-214ENST00000540113 LAMB2P55268 1798 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 ZNF213O14771 459 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 ATP6V1AP38606 617 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 ME1P48163 572 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 BARGINQ6ZT62 677 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 C11orf57Q6ZUT1 292 aaPredicted RBP13.49□□□□□ -0.25
C11orf54-214ENST00000540113 MB21D2Q8IYB1 491 aaPredicted RBP13.49□□□□□ -0.25
C11orf54-214ENST00000540113 TSC1Q92574 1164 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 ZNF512BQ96KM6 892 aaPredicted RBP13.49□□□□□ -0.25
C11orf54-214ENST00000540113 FAM13BQ9NYF5 915 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 RCOR1Q9UKL0 485 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 HPS5Q9UPZ3 1129 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 COL4A1P02462 1669 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 SPATA31A6Q5VVP1 1343 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 ATRNO75882 1429 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 LOC102724428A0A0B4J2F2 783 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 CAMTA2O94983 1202 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 ZNF165P49910 485 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 SIK1P57059 783 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 LRRFIP1Q32MZ4 808 aaKnown RBP13.49□□□□□ -0.25
C11orf54-214ENST00000540113 RBM43Q6ZSC3 357 aaKnown RBP13.49□□□□□ -0.25
C11orf54-214ENST00000540113 SENP2Q9HC62 589 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 CTNNA3Q9UI47 895 aa13.49□□□□□ -0.25
C11orf54-214ENST00000540113 COL5A3P25940 1745 aaPredicted RBP13.48□□□□□ -0.25
C11orf54-214ENST00000540113 FGFR2P21802 821 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 ADD2P35612 726 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 CCDC102BQ68D86 513 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 TBC1D10CQ8IV04 446 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 DRC7Q8IY82 874 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 CCDC144CPQ8IYA2 1237 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 AIFM3Q96NN9 605 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 TRIM5Q9C035 493 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 WWC3Q9ULE0 1092 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 CLIC4Q9Y696 253 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 ARID4AP29374 1257 aaPredicted RBP13.48□□□□□ -0.25
C11orf54-214ENST00000540113 SNW1Q13573 536 aaKnown RBP13.48□□□□□ -0.25
C11orf54-214ENST00000540113 CYB5R4Q7L1T6 521 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 RALYLQ86SE5 291 aaKnown RBP13.48□□□□□ -0.25
C11orf54-214ENST00000540113 STK11IPQ8N1F8 1099 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 NCOA7Q8NI08 942 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 ARID3AQ99856 593 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 SEC31BQ9NQW1 1179 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 BCORQ6W2J9 1755 aa13.48□□□□□ -0.25
C11orf54-214ENST00000540113 DOCK2Q92608 1830 aa13.47□□□□□ -0.25
C11orf54-214ENST00000540113 ZNF532Q9HCE3 1301 aa13.47□□□□□ -0.25
C11orf54-214ENST00000540113 LRMPQ12912 555 aa13.47□□□□□ -0.25
C11orf54-214ENST00000540113 CCDC186Q7Z3E2 898 aa13.47□□□□□ -0.25
C11orf54-214ENST00000540113 FSIP1Q8NA03 581 aa13.47□□□□□ -0.25
C11orf54-214ENST00000540113 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
C11orf54-214ENST00000540113 ORC3Q9UBD5 711 aaPredicted RBP13.47□□□□□ -0.25
C11orf54-214ENST00000540113 A0A1B0GVL5 298 aa13.47□□□□□ -0.25
C11orf54-214ENST00000540113 KIF28PB7ZC32 967 aa13.47□□□□□ -0.25
C11orf54-214ENST00000540113 PUM3Q15397 648 aaKnown RBP13.47□□□□□ -0.25
C11orf54-214ENST00000540113 PCDHA7Q9UN72 937 aa13.47□□□□□ -0.25
C11orf54-214ENST00000540113 KCNQ2O43526 872 aa13.46□□□□□ -0.25
C11orf54-214ENST00000540113 FBXL16Q8N461 479 aa13.46□□□□□ -0.25
C11orf54-214ENST00000540113 C8orf76Q96K31 380 aa13.46□□□□□ -0.25
C11orf54-214ENST00000540113 AK7Q96M32 723 aa13.46□□□□□ -0.25
C11orf54-214ENST00000540113 ZNF396Q96N95 335 aaPredicted RBP13.46□□□□□ -0.25
C11orf54-214ENST00000540113 MYL10Q9BUA6 226 aa13.46□□□□□ -0.25
C11orf54-214ENST00000540113 UTP14AQ9BVJ6 771 aaKnown RBP13.46□□□□□ -0.25
C11orf54-214ENST00000540113 KIF3AQ9Y496 699 aa13.46□□□□□ -0.25
C11orf54-214ENST00000540113 MROH5Q6ZUA9 1318 aa13.46□□□□□ -0.26
C11orf54-214ENST00000540113 B4E1Z4 1266 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 CPLX1O14810 134 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 NTSR2O95665 410 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 EVCP57679 992 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 VPS72Q15906 364 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 CCDC73Q6ZRK6 1079 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
C11orf54-214ENST00000540113 FNBP4Q8N3X1 1017 aaPredicted RBP13.45□□□□□ -0.26
C11orf54-214ENST00000540113 NGLY1Q96IV0 654 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.45□□□□□ -0.26
C11orf54-214ENST00000540113 CASZ1Q86V15 1759 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 TCRBV5S4A2TA0A5A2 114 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 UBE2Q2LH0YL09 131 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 ZNF75DP51815 510 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 KIAA1524Q8TCG1 905 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 LPIN2Q92539 896 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 BCL9LQ86UU0 1499 aa13.45□□□□□ -0.26
C11orf54-214ENST00000540113 RRP9O43818 475 aaKnown RBP13.44□□□□□ -0.26
C11orf54-214ENST00000540113 PDE6AP16499 860 aa13.44□□□□□ -0.26
C11orf54-214ENST00000540113 TERF1P54274 439 aa13.44□□□□□ -0.26
C11orf54-214ENST00000540113 ENGASEQ8NFI3 743 aa13.44□□□□□ -0.26
C11orf54-214ENST00000540113 TDRD7Q8NHU6 1098 aaKnown RBP13.44□□□□□ -0.26
C11orf54-214ENST00000540113 PHKBQ93100 1093 aa13.44□□□□□ -0.26
C11orf54-214ENST00000540113 C8orf37Q96NL8 207 aa13.44□□□□□ -0.26
C11orf54-214ENST00000540113 KINO60870 393 aaKnown RBP13.44□□□□□ -0.26
C11orf54-214ENST00000540113 CTDSPL2Q05D32 466 aa13.44□□□□□ -0.26
C11orf54-214ENST00000540113 TTF1Q15361 905 aaPredicted RBP13.44□□□□□ -0.26
C11orf54-214ENST00000540113 UBE3CQ15386 1083 aa13.44□□□□□ -0.26
C11orf54-214ENST00000540113 C4AP0C0L4 1744 aa13.44□□□□□ -0.26
C11orf54-214ENST00000540113 C4BP0C0L5 1744 aa13.44□□□□□ -0.26
C11orf54-214ENST00000540113 NEDD4P46934 1319 aa13.44□□□□□ -0.26
C11orf54-214ENST00000540113 A0A1B0GUL6 1792 aa13.44□□□□□ -0.26
C11orf54-214ENST00000540113 UQCRFS1P1P0C7P4 283 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 NDUFA8P51970 172 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 RASGRF1Q13972 1273 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 IQCB1Q15051 598 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms