RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 SYNE3Q6ZMZ3 975 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 WDR24Q96S15 920 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 ORAI2Q96SN7 254 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 SLC52A2Q9HAB3 445 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 TADA3O75528 432 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 CAPN2P17655 700 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 CASP7P55210 303 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 TMCO3Q6UWJ1 677 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 CCDC34Q96HJ3 373 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 PUS3Q9BZE2 481 aaKnown RBP16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 PRC1O43663 620 aa16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 YEATS4O95619 227 aa16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 IFIT1P09914 478 aaKnown RBP16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 FOXO4P98177 505 aa16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 FANCLQ9NW38 375 aa16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 VWA3AA6NCI4 1184 aa16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 UBE2Q2LH0YL09 131 aa16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 FOXN1O15353 648 aa16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 RNF113AO15541 343 aaKnown RBP16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 CDC27P30260 824 aa16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 GYS2P54840 703 aa16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 ANTXR2P58335 489 aa16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 KIF23Q02241 960 aaPredicted RBP16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 INTS13Q9NVM9 706 aa16.1■□□□□ 0.17
SCNN1A-215ENST00000540037 ZC3H6P61129 1189 aaKnown RBP16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 TPM4P67936 248 aa16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 SPECC1Q5M775 1068 aa16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 SHC4Q6S5L8 630 aa16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 FOXP4Q8IVH2 680 aaPredicted RBP16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 PHLPP2Q6ZVD8 1323 aa16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 ARHGAP23Q9P227 1491 aa16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 CPLX1O14810 134 aa16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 SYKP43405 635 aa16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 EVCP57679 992 aa16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 PDE4BQ07343 736 aa16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 WASHC4Q2M389 1173 aa16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 KDM6AO15550 1401 aaPredicted RBP16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 SIPA1L3O60292 1781 aaPredicted RBP16.09■□□□□ 0.17
SCNN1A-215ENST00000540037 FGAP02671 866 aa16.08■□□□□ 0.17
SCNN1A-215ENST00000540037 CMA1P23946 247 aa16.08■□□□□ 0.17
SCNN1A-215ENST00000540037 PI16Q6UXB8 463 aa16.08■□□□□ 0.17
SCNN1A-215ENST00000540037 A0A1B0GUL7 405 aa16.08■□□□□ 0.16
SCNN1A-215ENST00000540037 TMEM139Q8IV31 216 aa16.08■□□□□ 0.16
SCNN1A-215ENST00000540037 NRDCO43847 1150 aa16.08■□□□□ 0.16
SCNN1A-215ENST00000540037 KCNJ6P48051 423 aa16.08■□□□□ 0.16
SCNN1A-215ENST00000540037 STK11IPQ8N1F8 1099 aa16.08■□□□□ 0.16
SCNN1A-215ENST00000540037 THEMISQ8N1K5 641 aaPredicted RBP16.08■□□□□ 0.16
SCNN1A-215ENST00000540037 AFDNP55196 1824 aaKnown RBP16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 TBC1D8O95759 1140 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 BMP6P22004 513 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 ADKP55263 362 aaKnown RBP16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 GNL2Q13823 731 aaKnown RBP16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 TOGARAM2Q6ZUX3 1019 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 PDILTQ8N807 584 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 PHKBQ93100 1093 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 SMARCE1Q969G3 411 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 CCDC85AQ96PX6 553 aaPredicted RBP16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 PPP2R2CQ9Y2T4 447 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 IKBKBO14920 756 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 TOP1P11387 765 aaKnown RBP16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 ADORA1P30542 326 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 MYL5Q02045 173 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 SCARF1Q14162 830 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 TEX35Q5T0J7 233 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 VSTM4Q8IW00 320 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 DESI2Q9BSY9 194 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 PUS7LQ9H0K6 701 aaKnown RBP16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 SENP2Q9HC62 589 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 CALCOCO1Q9P1Z2 691 aa16.07■□□□□ 0.16
SCNN1A-215ENST00000540037 GNG11P61952 73 aa16.06■□□□□ 0.16
SCNN1A-215ENST00000540037 LONRF3Q496Y0 759 aa16.06■□□□□ 0.16
SCNN1A-215ENST00000540037 METTL16Q86W50 562 aaKnown RBP16.06■□□□□ 0.16
SCNN1A-215ENST00000540037 MB21D2Q8IYB1 491 aaPredicted RBP16.06■□□□□ 0.16
SCNN1A-215ENST00000540037 IRX2Q9BZI1 471 aaPredicted RBP16.06■□□□□ 0.16
SCNN1A-215ENST00000540037 ZSWIM4Q9H7M6 989 aa16.06■□□□□ 0.16
SCNN1A-215ENST00000540037 NLRP2Q9NX02 1062 aa16.06■□□□□ 0.16
SCNN1A-215ENST00000540037 SLC39A14Q15043 492 aa16.06■□□□□ 0.16
SCNN1A-215ENST00000540037 BRAPQ7Z569 592 aa16.06■□□□□ 0.16
SCNN1A-215ENST00000540037 ARGLU1Q9NWB6 273 aaPredicted RBP16.06■□□□□ 0.16
SCNN1A-215ENST00000540037 TUBE1Q9UJT0 475 aa16.06■□□□□ 0.16
SCNN1A-215ENST00000540037 SNRPA1P09661 255 aaKnown RBP16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 LRRFIP1Q32MZ4 808 aaKnown RBP16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 TTLL7Q6ZT98 887 aa16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 VPS37DQ86XT2 251 aa16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 OVOS2A0A0G2JMS6 1433 aa16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 NWD2Q9ULI1 1742 aa16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 OAS2P29728 719 aaKnown RBP16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 ZNF827Q17R98 1081 aa16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 PCDHA5Q9Y5H7 936 aa16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 A0A0U1RQJ8 604 aa16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 EFCAB8A8MWE9 144 aa16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 PHKG2P15735 406 aa16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 KARSQ15046 597 aaKnown RBP16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 IMMTQ16891 758 aaKnown RBP16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 CC2D1AQ6P1N0 951 aaPredicted RBP16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 TRMT44Q8IYL2 757 aaKnown RBP16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 TTC5Q8N0Z6 440 aa16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 ATRIPQ8WXE1 791 aa16.05■□□□□ 0.16
SCNN1A-215ENST00000540037 MTF1Q14872 753 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms