RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 VPS37DQ86XT2 251 aa21.68■■□□□ 1.06
PDCD2-207ENST00000539212 IFNL1Q8IU54 200 aa21.68■■□□□ 1.06
PDCD2-207ENST00000539212 MANSC4A6NHS7 340 aaPredicted RBP21.67■■□□□ 1.06
PDCD2-207ENST00000539212 ZBTB48P10074 688 aaPredicted RBP21.67■■□□□ 1.06
PDCD2-207ENST00000539212 BCAMP50895 628 aa21.67■■□□□ 1.06
PDCD2-207ENST00000539212 CACNB3P54284 484 aa21.67■■□□□ 1.06
PDCD2-207ENST00000539212 TEPSINQ96N21 525 aa21.67■■□□□ 1.06
PDCD2-207ENST00000539212 CFHR5Q9BXR6 569 aa21.67■■□□□ 1.06
PDCD2-207ENST00000539212 TMEM39BQ9GZU3 492 aa21.67■■□□□ 1.06
PDCD2-207ENST00000539212 FKTNO75072 461 aa21.66■■□□□ 1.06
PDCD2-207ENST00000539212 IREB2P48200 963 aaKnown RBP21.66■■□□□ 1.06
PDCD2-207ENST00000539212 ELP3Q9H9T3 547 aa21.66■■□□□ 1.06
PDCD2-207ENST00000539212 SMC4Q9NTJ3 1288 aa21.66■■□□□ 1.06
PDCD2-207ENST00000539212 FRAT2O75474 233 aaPredicted RBP21.65■■□□□ 1.06
PDCD2-207ENST00000539212 RFX5P48382 616 aaPredicted RBP21.65■■□□□ 1.06
PDCD2-207ENST00000539212 NOM1Q5C9Z4 860 aaKnown RBP21.65■■□□□ 1.06
PDCD2-207ENST00000539212 CNKSR2Q8WXI2 1034 aa21.65■■□□□ 1.06
PDCD2-207ENST00000539212 CENPFP49454 3210 aa21.65■■□□□ 1.06
PDCD2-207ENST00000539212 TNFAIP1Q13829 316 aa21.64■■□□□ 1.05
PDCD2-207ENST00000539212 CAVIN4Q5BKX8 364 aa21.64■■□□□ 1.05
PDCD2-207ENST00000539212 ANKRD13AQ8IZ07 590 aa21.64■■□□□ 1.05
PDCD2-207ENST00000539212 FGFR2P21802 821 aa21.63■■□□□ 1.05
PDCD2-207ENST00000539212 PUM3Q15397 648 aaKnown RBP21.63■■□□□ 1.05
PDCD2-207ENST00000539212 OPTNQ96CV9 577 aa21.63■■□□□ 1.05
PDCD2-207ENST00000539212 ZSWIM8A7E2V4 1837 aa21.63■■□□□ 1.05
PDCD2-207ENST00000539212 ALDH1A1P00352 501 aa21.62■■□□□ 1.05
PDCD2-207ENST00000539212 PKN2Q16513 984 aaKnown RBP21.62■■□□□ 1.05
PDCD2-207ENST00000539212 ALDH1L2Q3SY69 923 aa21.62■■□□□ 1.05
PDCD2-207ENST00000539212 PTPN18Q99952 460 aa21.62■■□□□ 1.05
PDCD2-207ENST00000539212 EYA2O00167 538 aa21.61■■□□□ 1.05
PDCD2-207ENST00000539212 CRHR2Q13324 411 aa21.61■■□□□ 1.05
PDCD2-207ENST00000539212 FBXO46Q6PJ61 603 aaPredicted RBP21.61■■□□□ 1.05
PDCD2-207ENST00000539212 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.61■■□□□ 1.05
PDCD2-207ENST00000539212 TBC1D22AQ8WUA7 517 aa21.61■■□□□ 1.05
PDCD2-207ENST00000539212 TEKT1Q969V4 418 aa21.61■■□□□ 1.05
PDCD2-207ENST00000539212 AK9Q5TCS8 1911 aa21.61■■□□□ 1.05
PDCD2-207ENST00000539212 UNCXA6NJT0 531 aa21.6■■□□□ 1.05
PDCD2-207ENST00000539212 IFIT1P09914 478 aaKnown RBP21.6■■□□□ 1.05
PDCD2-207ENST00000539212 INHBEP58166 350 aa21.6■■□□□ 1.05
PDCD2-207ENST00000539212 VGLL4Q14135 290 aa21.6■■□□□ 1.05
PDCD2-207ENST00000539212 ATG9AQ7Z3C6 839 aa21.6■■□□□ 1.05
PDCD2-207ENST00000539212 TRMT2AQ8IZ69 625 aaKnown RBP21.6■■□□□ 1.05
PDCD2-207ENST00000539212 SIL1Q9H173 461 aa21.6■■□□□ 1.05
PDCD2-207ENST00000539212 PDE4DIPQ5VU43 2346 aa21.6■■□□□ 1.05
PDCD2-207ENST00000539212 TNNI2P48788 182 aa21.59■■□□□ 1.05
PDCD2-207ENST00000539212 NOB1Q9ULX3 412 aaKnown RBP21.59■■□□□ 1.05
PDCD2-207ENST00000539212 TRIM17Q9Y577 477 aa21.59■■□□□ 1.05
PDCD2-207ENST00000539212 KIF16BQ96L93 1317 aa21.58■■□□□ 1.05
PDCD2-207ENST00000539212 BRCA2P51587 3418 aa21.58■■□□□ 1.05
PDCD2-207ENST00000539212 SLC5A1P13866 664 aa21.58■■□□□ 1.05
PDCD2-207ENST00000539212 HDLBPQ00341 1268 aaKnown RBP21.58■■□□□ 1.05
PDCD2-207ENST00000539212 CAP1Q01518 475 aa21.58■■□□□ 1.05
PDCD2-207ENST00000539212 APOBEC3HQ6NTF7 200 aaKnown RBP21.58■■□□□ 1.05
PDCD2-207ENST00000539212 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.58■■□□□ 1.051e-10■□□□□ 8.2
PDCD2-207ENST00000539212 CD99L2Q8TCZ2 262 aa21.58■■□□□ 1.05
PDCD2-207ENST00000539212 ZDHHC15Q96MV8 337 aa21.58■■□□□ 1.05
PDCD2-207ENST00000539212 TESPA1A2RU30 521 aaPredicted RBP21.57■■□□□ 1.04
PDCD2-207ENST00000539212 UBTFL1P0CB47 393 aaPredicted RBP21.57■■□□□ 1.04
PDCD2-207ENST00000539212 OTOP1Q7RTM1 612 aa21.57■■□□□ 1.04
PDCD2-207ENST00000539212 OTUD5Q96G74 571 aa21.57■■□□□ 1.04
PDCD2-207ENST00000539212 MYH2Q9UKX2 1941 aa21.57■■□□□ 1.04
PDCD2-207ENST00000539212 RBBP6Q7Z6E9 1792 aaKnown RBP21.56■■□□□ 1.04
PDCD2-207ENST00000539212 MAP3K9P80192 1104 aa21.56■■□□□ 1.04
PDCD2-207ENST00000539212 BRI3BPQ8WY22 251 aa21.56■■□□□ 1.04
PDCD2-207ENST00000539212 LPIN2Q92539 896 aa21.56■■□□□ 1.04
PDCD2-207ENST00000539212 MS4A4AQ96JQ5 239 aa21.56■■□□□ 1.04
PDCD2-207ENST00000539212 PA2G4Q9UQ80 394 aaKnown RBP21.56■■□□□ 1.04
PDCD2-207ENST00000539212 LRRFIP2Q9Y608 721 aaKnown RBP21.56■■□□□ 1.04
PDCD2-207ENST00000539212 DOCK2Q92608 1830 aa21.56■■□□□ 1.04
PDCD2-207ENST00000539212 DIXDC1Q155Q3 683 aa21.55■■□□□ 1.04
PDCD2-207ENST00000539212 SNCAIPQ9Y6H5 919 aa21.55■■□□□ 1.04
PDCD2-207ENST00000539212 MAST3O60307 1309 aa21.55■■□□□ 1.04
PDCD2-207ENST00000539212 CCL15-CCL14A0A0B4J2E2 113 aa21.54■■□□□ 1.04
PDCD2-207ENST00000539212 CCL15Q16663 113 aa21.54■■□□□ 1.04
PDCD2-207ENST00000539212 ATP2B3Q16720 1220 aa21.54■■□□□ 1.04
PDCD2-207ENST00000539212 ZKSCAN4Q969J2 545 aaPredicted RBP21.54■■□□□ 1.04
PDCD2-207ENST00000539212 MEIS3Q99687 375 aa21.54■■□□□ 1.04
PDCD2-207ENST00000539212 TMOD2Q9NZR1 351 aa21.54■■□□□ 1.04
PDCD2-207ENST00000539212 CSADQ9Y600 493 aa21.54■■□□□ 1.04
PDCD2-207ENST00000539212 MKI67P46013 3256 aaKnown RBP21.54■■□□□ 1.04
PDCD2-207ENST00000539212 PRDX5P30044 214 aa21.53■■□□□ 1.04
PDCD2-207ENST00000539212 OTUD7BQ6GQQ9 843 aa21.53■■□□□ 1.04
PDCD2-207ENST00000539212 FAM43AQ8N2R8 423 aa21.53■■□□□ 1.04
PDCD2-207ENST00000539212 WRNIP1Q96S55 665 aa21.53■■□□□ 1.04
PDCD2-207ENST00000539212 DAGLAQ9Y4D2 1042 aa21.53■■□□□ 1.04
PDCD2-207ENST00000539212 SLC34A2O95436 690 aa21.52■■□□□ 1.04
PDCD2-207ENST00000539212 ADORA1P30542 326 aa21.52■■□□□ 1.04
PDCD2-207ENST00000539212 HHIPL2Q6UWX4 724 aa21.52■■□□□ 1.04
PDCD2-207ENST00000539212 ERO1AQ96HE7 468 aa21.52■■□□□ 1.04
PDCD2-207ENST00000539212 SUGT1Q9Y2Z0 365 aa21.52■■□□□ 1.04
PDCD2-207ENST00000539212 RPAP1Q9BWH6 1393 aaPredicted RBP21.51■■□□□ 1.03
PDCD2-207ENST00000539212 SPDYE5A6NIY4 337 aa21.51■■□□□ 1.03
PDCD2-207ENST00000539212 CIAO1O76071 339 aa21.51■■□□□ 1.03
PDCD2-207ENST00000539212 PHKA1P46020 1223 aa21.51■■□□□ 1.03
PDCD2-207ENST00000539212 TAF1CQ15572 869 aaPredicted RBP21.51■■□□□ 1.03
PDCD2-207ENST00000539212 MIGA2Q7L4E1 593 aa21.51■■□□□ 1.03
PDCD2-207ENST00000539212 FAM83AQ86UY5 434 aa21.51■■□□□ 1.03
PDCD2-207ENST00000539212 WDR66Q8TBY9 1149 aa21.51■■□□□ 1.03
PDCD2-207ENST00000539212 MRIQ9BWK5 157 aa21.51■■□□□ 1.03
PDCD2-207ENST00000539212 API5Q9BZZ5 524 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms