RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 FAM177BA6PVY3 158 aa20.97■□□□□ 0.95
GNE-204ENST00000539208 RGL2O15211 777 aa20.97■□□□□ 0.95
GNE-204ENST00000539208 APPP05067 770 aa20.97■□□□□ 0.95
GNE-204ENST00000539208 PTMAP06454 111 aaKnown RBP20.97■□□□□ 0.95
GNE-204ENST00000539208 ILDR1Q86SU0 546 aaPredicted RBP20.97■□□□□ 0.95
GNE-204ENST00000539208 USP28Q96RU2 1077 aa20.97■□□□□ 0.95
GNE-204ENST00000539208 FBXO18Q8NFZ0 1043 aa20.96■□□□□ 0.95
GNE-204ENST00000539208 TMEM87BQ96K49 555 aa20.96■□□□□ 0.95
GNE-204ENST00000539208 NUTM2BA6NNL0 878 aaPredicted RBP20.96■□□□□ 0.95
GNE-204ENST00000539208 NUTM2EB1AL46 878 aaPredicted RBP20.96■□□□□ 0.95
GNE-204ENST00000539208 SH2B2O14492 632 aaPredicted RBP20.96■□□□□ 0.95
GNE-204ENST00000539208 FOSBP53539 338 aa20.96■□□□□ 0.95
GNE-204ENST00000539208 NUTM2AQ8IVF1 878 aaPredicted RBP20.96■□□□□ 0.95
GNE-204ENST00000539208 C8orf76Q96K31 380 aa20.96■□□□□ 0.95
GNE-204ENST00000539208 NAP1L5Q96NT1 182 aaPredicted RBP20.96■□□□□ 0.95
GNE-204ENST00000539208 C4AP0C0L4 1744 aa20.95■□□□□ 0.94
GNE-204ENST00000539208 C4BP0C0L5 1744 aa20.95■□□□□ 0.94
GNE-204ENST00000539208 CPLX1O14810 134 aa20.95■□□□□ 0.94
GNE-204ENST00000539208 CYB5R4Q7L1T6 521 aa20.95■□□□□ 0.94
GNE-204ENST00000539208 MAGEB6Q8N7X4 407 aa20.95■□□□□ 0.94
GNE-204ENST00000539208 RTEL1Q9NZ71 1219 aa20.95■□□□□ 0.94
GNE-204ENST00000539208 ORC3Q9UBD5 711 aaPredicted RBP20.95■□□□□ 0.94
GNE-204ENST00000539208 CTAGE5O15320 804 aa20.95■□□□□ 0.94
GNE-204ENST00000539208 CAVIN2O95810 425 aa20.95■□□□□ 0.94
GNE-204ENST00000539208 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.95■□□□□ 0.94
GNE-204ENST00000539208 CKAP2LQ8IYA6 745 aa20.95■□□□□ 0.94
GNE-204ENST00000539208 IFNL3Q8IZI9 196 aa20.95■□□□□ 0.94
GNE-204ENST00000539208 CDC5LQ99459 802 aaKnown RBP20.95■□□□□ 0.94
GNE-204ENST00000539208 BCL9LQ86UU0 1499 aa20.94■□□□□ 0.94
GNE-204ENST00000539208 SNAP23O00161 211 aa20.94■□□□□ 0.94
GNE-204ENST00000539208 KCNQ2O43526 872 aa20.94■□□□□ 0.94
GNE-204ENST00000539208 GNAT2P19087 354 aa20.94■□□□□ 0.94
GNE-204ENST00000539208 GUCY1B3Q02153 619 aa20.94■□□□□ 0.94
GNE-204ENST00000539208 CEBPZQ03701 1054 aaKnown RBP20.94■□□□□ 0.94
GNE-204ENST00000539208 CHRNDQ07001 517 aa20.94■□□□□ 0.94
GNE-204ENST00000539208 BRAPQ7Z569 592 aa20.94■□□□□ 0.94
GNE-204ENST00000539208 PNPLA7Q6ZV29 1317 aa20.94■□□□□ 0.94
GNE-204ENST00000539208 BCAMP50895 628 aa20.93■□□□□ 0.94
GNE-204ENST00000539208 CCAR1Q8IX12 1150 aaKnown RBP20.93■□□□□ 0.94
GNE-204ENST00000539208 MBD4O95243 580 aa20.93■□□□□ 0.94
GNE-204ENST00000539208 SF3B3Q15393 1217 aaKnown RBP20.93■□□□□ 0.94
GNE-204ENST00000539208 SASS6Q6UVJ0 657 aa20.93■□□□□ 0.94
GNE-204ENST00000539208 SGMS1Q86VZ5 419 aa20.93■□□□□ 0.94
GNE-204ENST00000539208 IGDCC4Q8TDY8 1250 aa20.93■□□□□ 0.94
GNE-204ENST00000539208 FTOQ9C0B1 505 aaKnown RBP eCLIP20.93■□□□□ 0.94
GNE-204ENST00000539208 EPB41L4AQ9HCS5 686 aaPredicted RBP20.93■□□□□ 0.94
GNE-204ENST00000539208 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.93■□□□□ 0.94
GNE-204ENST00000539208 TIAM2Q8IVF5 1701 aa20.92■□□□□ 0.94
GNE-204ENST00000539208 PPFIA3O75145 1194 aa20.92■□□□□ 0.94
GNE-204ENST00000539208 CDKL5O76039 1030 aa20.92■□□□□ 0.94
GNE-204ENST00000539208 NAPBQ9H115 298 aa20.92■□□□□ 0.94
GNE-204ENST00000539208 CNNM2Q9H8M5 875 aa20.92■□□□□ 0.94
GNE-204ENST00000539208 GSG1L2A8MUP6 293 aa20.92■□□□□ 0.94
GNE-204ENST00000539208 AP5Z1O43299 807 aa20.92■□□□□ 0.94
GNE-204ENST00000539208 ENGASEQ8NFI3 743 aa20.92■□□□□ 0.94
GNE-204ENST00000539208 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.92■□□□□ 0.94
GNE-204ENST00000539208 DENND2AQ9ULE3 1009 aa20.92■□□□□ 0.94
GNE-204ENST00000539208 NEDD4P46934 1319 aa20.91■□□□□ 0.94
GNE-204ENST00000539208 B4E1Z4 1266 aa20.91■□□□□ 0.94
GNE-204ENST00000539208 LIFRP42702 1097 aa20.91■□□□□ 0.94
GNE-204ENST00000539208 METAP2P50579 478 aaKnown RBP eCLIP20.91■□□□□ 0.94
GNE-204ENST00000539208 SNW1Q13573 536 aaKnown RBP20.91■□□□□ 0.94
GNE-204ENST00000539208 ANO6Q4KMQ2 910 aa20.91■□□□□ 0.94
GNE-204ENST00000539208 APOA5Q6Q788 366 aa20.91■□□□□ 0.94
GNE-204ENST00000539208 CCDC73Q6ZRK6 1079 aa20.91■□□□□ 0.94
GNE-204ENST00000539208 LINC00116Q8NCU8 138 aa20.91■□□□□ 0.94
GNE-204ENST00000539208 NKX2-3Q8TAU0 364 aa20.91■□□□□ 0.94
GNE-204ENST00000539208 POLR3EQ9NVU0 708 aa20.91■□□□□ 0.94
GNE-204ENST00000539208 ZNF804BA4D1E1 1349 aa20.91■□□□□ 0.94
GNE-204ENST00000539208 CNTNAP4Q9C0A0 1308 aa20.91■□□□□ 0.94
GNE-204ENST00000539208 FAM160A1Q05DH4 1040 aa20.9■□□□□ 0.94
GNE-204ENST00000539208 ARMT1Q9H993 441 aa20.9■□□□□ 0.94
GNE-204ENST00000539208 A0A1W2PQ27 194 aa20.9■□□□□ 0.94
GNE-204ENST00000539208 A0A1W2PQ64 194 aa20.9■□□□□ 0.94
GNE-204ENST00000539208 A0A1W2PQD8 194 aa20.9■□□□□ 0.94
GNE-204ENST00000539208 YEATS4O95619 227 aa20.9■□□□□ 0.94
GNE-204ENST00000539208 ADALQ6DHV7 355 aa20.9■□□□□ 0.94
GNE-204ENST00000539208 CPLX2Q6PUV4 134 aaKnown RBP20.9■□□□□ 0.94
GNE-204ENST00000539208 NACAP1Q9BZK3 213 aa20.9■□□□□ 0.94
GNE-204ENST00000539208 KRT23Q9C075 422 aa20.9■□□□□ 0.94
GNE-204ENST00000539208 GOLPH3LQ9H4A5 285 aa20.9■□□□□ 0.94
GNE-204ENST00000539208 LY9Q9HBG7 655 aa20.9■□□□□ 0.94
GNE-204ENST00000539208 CBX8Q9HC52 389 aa20.9■□□□□ 0.94
GNE-204ENST00000539208 TOM1O60784 492 aa20.89■□□□□ 0.94
GNE-204ENST00000539208 ME1P48163 572 aa20.89■□□□□ 0.94
GNE-204ENST00000539208 TERF1P54274 439 aa20.89■□□□□ 0.94
GNE-204ENST00000539208 SLC10A5Q5PT55 438 aa20.89■□□□□ 0.94
GNE-204ENST00000539208 AKNAD1Q5T1N1 836 aa20.89■□□□□ 0.94
GNE-204ENST00000539208 ANKRD18AQ8IVF6 992 aa20.89■□□□□ 0.94
GNE-204ENST00000539208 LINC00301Q8NCQ3 95 aa20.89■□□□□ 0.94
GNE-204ENST00000539208 MTA3Q9BTC8 594 aa20.89■□□□□ 0.94
GNE-204ENST00000539208 ANO8Q9HCE9 1232 aaPredicted RBP20.89■□□□□ 0.94
GNE-204ENST00000539208 BSDC1Q9NW68 430 aaPredicted RBP20.89■□□□□ 0.94
GNE-204ENST00000539208 TPM3P06753 285 aa20.89■□□□□ 0.93
GNE-204ENST00000539208 UBE4AQ14139 1066 aa20.89■□□□□ 0.93
GNE-204ENST00000539208 VPS72Q15906 364 aa20.89■□□□□ 0.93
GNE-204ENST00000539208 ERFEQ4G0M1 354 aa20.89■□□□□ 0.93
GNE-204ENST00000539208 OTUD7BQ6GQQ9 843 aa20.89■□□□□ 0.93
GNE-204ENST00000539208 TDRD7Q8NHU6 1098 aaKnown RBP20.89■□□□□ 0.93
GNE-204ENST00000539208 KCNG4Q8TDN1 519 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms