RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 MTMR3Q13615 1198 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 IER5Q5VY09 327 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 NUTM2GQ5VZR2 741 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 TREML1Q86YW5 311 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 ETFBKMTQ8IXQ9 262 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 HELQQ8TDG4 1101 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 CNTNAP3BQ96NU0 1288 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 CNTNAP3Q9BZ76 1288 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 BRD7Q9NPI1 651 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 MARK1Q9P0L2 795 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 DNMT3AQ9Y6K1 912 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-208ENST00000538266 MED1Q15648 1581 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-208ENST00000538266 SSH2Q76I76 1423 aa5.82□□□□□ -1.48
SNHG1-208ENST00000538266 COL22A1Q8NFW1 1626 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-208ENST00000538266 OPLAHO14841 1288 aa5.82□□□□□ -1.48
SNHG1-208ENST00000538266 ZBTB39O15060 712 aa5.82□□□□□ -1.48
SNHG1-208ENST00000538266 FGFR3P22607 806 aa5.82□□□□□ -1.48
SNHG1-208ENST00000538266 IDH3AP50213 366 aa5.82□□□□□ -1.48
SNHG1-208ENST00000538266 DDX10Q13206 875 aaKnown RBP5.82□□□□□ -1.48
SNHG1-208ENST00000538266 RNFT1Q5M7Z0 435 aa5.82□□□□□ -1.48
SNHG1-208ENST00000538266 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
SNHG1-208ENST00000538266 MEX3CQ5U5Q3 659 aaKnown RBP5.82□□□□□ -1.48
SNHG1-208ENST00000538266 NME9Q86XW9 330 aa5.82□□□□□ -1.48
SNHG1-208ENST00000538266 COG3Q96JB2 828 aa5.82□□□□□ -1.48
SNHG1-208ENST00000538266 KCNH4Q9UQ05 1017 aa5.82□□□□□ -1.48
SNHG1-208ENST00000538266 ABCA3Q99758 1704 aa5.82□□□□□ -1.48
SNHG1-208ENST00000538266 NSD2O96028 1365 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 EFSO43281 561 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 CD33P20138 364 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 INPP5BP32019 993 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 TYRO3Q06418 890 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 ZNF211Q13398 564 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-208ENST00000538266 SF3B2Q13435 895 aaKnown RBP5.81□□□□□ -1.48
SNHG1-208ENST00000538266 AAMPQ13685 434 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 LAMC2Q13753 1193 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 GAS6Q14393 721 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 NOM1Q5C9Z4 860 aaKnown RBP5.81□□□□□ -1.48
SNHG1-208ENST00000538266 FAM26DQ5JW98 314 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-208ENST00000538266 KCTD17Q8N5Z5 321 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 KCNH5Q8NCM2 988 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 GGNBP2Q9H3C7 697 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 STRN4Q9NRL3 753 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 HCN2Q9UL51 889 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 NSFL1CQ9UNZ2 370 aaKnown RBP5.81□□□□□ -1.48
SNHG1-208ENST00000538266 OVOS2A0A0J9YW53 1432 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 OVOS2Q6IE36 1432 aa5.81□□□□□ -1.48
SNHG1-208ENST00000538266 PHRF1Q9P1Y6 1649 aaKnown RBP5.81□□□□□ -1.48
SNHG1-208ENST00000538266 USP19O94966 1318 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 ANKRD26Q9UPS8 1709 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 USP54Q70EL1 1684 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 ZBTB7CA1YPR0 619 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 C2CD2LO14523 706 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 FYB1O15117 783 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 ICMTO60725 284 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 FAM13AO94988 1023 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 ADAMTS2O95450 1211 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 BMP4P12644 408 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 ARSDP51689 593 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 KCNQ4P56696 695 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 KRT76Q01546 638 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 KCNA1Q09470 495 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 CNGB1Q14028 1251 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-208ENST00000538266 CC2D1BQ5T0F9 858 aaKnown RBP5.8□□□□□ -1.48
SNHG1-208ENST00000538266 MORC1Q86VD1 984 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 CMTR1Q8N1G2 835 aaKnown RBP5.8□□□□□ -1.48
SNHG1-208ENST00000538266 PRDM11Q9NQV5 511 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 MBIPQ9NS73 344 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 PRR12Q9ULL5 1215 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 GNEQ9Y223 722 aaKnown RBP5.8□□□□□ -1.48
SNHG1-208ENST00000538266 USP20Q9Y2K6 914 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 RTCBQ9Y3I0 505 aaKnown RBP5.8□□□□□ -1.48
SNHG1-208ENST00000538266 USP31Q70CQ4 1352 aa5.8□□□□□ -1.48
SNHG1-208ENST00000538266 CRYBG1Q9Y4K1 1723 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 SLIT3O75094 1523 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 GCP02774 474 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 EPB42P16452 691 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 MPSTP25325 297 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 ZAP70P43403 619 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 SRSF11Q05519 484 aaKnown RBP5.79□□□□□ -1.48
SNHG1-208ENST00000538266 GRIN2CQ14957 1233 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 FAM182BQ5T319 152 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 ALKBH2Q6NS38 261 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 ATCAYQ86WG3 371 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 RGL4Q8IZJ4 473 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 PIK3R5Q8WYR1 880 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 FAM13BQ9NYF5 915 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 EGFL7Q9UHF1 273 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 MARF1Q9Y4F3 1742 aaKnown RBP5.79□□□□□ -1.48
SNHG1-208ENST00000538266 NPC1L1Q9UHC9 1359 aa5.79□□□□□ -1.48
SNHG1-208ENST00000538266 LRP6O75581 1613 aa5.78□□□□□ -1.48
SNHG1-208ENST00000538266 PATL2C9JE40 543 aaKnown RBP5.78□□□□□ -1.48
SNHG1-208ENST00000538266 NPR3P17342 541 aa5.78□□□□□ -1.48
SNHG1-208ENST00000538266 TNNT2P45379 298 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-208ENST00000538266 EIF1AXP47813 144 aaKnown RBP5.78□□□□□ -1.48
SNHG1-208ENST00000538266 ZC3H6P61129 1189 aaKnown RBP5.78□□□□□ -1.48
SNHG1-208ENST00000538266 GLYCTKQ8IVS8 523 aa5.78□□□□□ -1.48
SNHG1-208ENST00000538266 GPR152Q8TDT2 470 aa5.78□□□□□ -1.48
SNHG1-208ENST00000538266 C8orf37Q96NL8 207 aa5.78□□□□□ -1.48
SNHG1-208ENST00000538266 IVNS1ABPQ9Y6Y0 642 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms