RNA–Protein interactions for RNA: ENST00000535458.6

KPNB1-202, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-202ENST00000535458 FAM89AQ96GI7 184 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 GJB4Q9NTQ9 266 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 OGFRQ9NZT2 677 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 HPS5Q9UPZ3 1129 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 ROBO1Q9Y6N7 1651 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 WDR17Q8IZU2 1322 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 A0A1W2PQ27 194 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 A0A1W2PQ64 194 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 A0A1W2PQD8 194 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 DHX16O60231 1041 aaKnown RBP10.28□□□□□ -0.76
KPNB1-202ENST00000535458 NEMFO60524 1076 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 PI16Q6UXB8 463 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 FBXO18Q8NFZ0 1043 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 NCOA7Q8NI08 942 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 NAT10Q9H0A0 1025 aaKnown RBP10.28□□□□□ -0.76
KPNB1-202ENST00000535458 PRDM11Q9NQV5 511 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 NWD2Q9ULI1 1742 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 UBR2Q8IWV8 1755 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 ZNF213O14771 459 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 CPLX1O14810 134 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 ANTXR2P58335 489 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 RBM6P78332 1123 aaKnown RBP10.28□□□□□ -0.76
KPNB1-202ENST00000535458 PTPN14Q15678 1187 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 RALYLQ86SE5 291 aaKnown RBP10.28□□□□□ -0.76
KPNB1-202ENST00000535458 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 PAXBP1Q9Y5B6 917 aa10.28□□□□□ -0.76
KPNB1-202ENST00000535458 CCDC69A6NI79 296 aa10.27□□□□□ -0.77
KPNB1-202ENST00000535458 SPTLC2O15270 562 aa10.27□□□□□ -0.77
KPNB1-202ENST00000535458 SKILP12757 684 aa10.27□□□□□ -0.77
KPNB1-202ENST00000535458 NKX1-1Q15270 411 aaPredicted RBP10.27□□□□□ -0.77
KPNB1-202ENST00000535458 MYSM1Q5VVJ2 828 aa10.27□□□□□ -0.77
KPNB1-202ENST00000535458 KCNG4Q8TDN1 519 aa10.27□□□□□ -0.77
KPNB1-202ENST00000535458 GPAA1O43292 621 aa10.27□□□□□ -0.77
KPNB1-202ENST00000535458 YEATS4O95619 227 aa10.27□□□□□ -0.77
KPNB1-202ENST00000535458 IFIT5Q13325 482 aaKnown RBP10.27□□□□□ -0.77
KPNB1-202ENST00000535458 ZRSR1Q15695 479 aaKnown RBP10.27□□□□□ -0.77
KPNB1-202ENST00000535458 FAM177A1Q8N128 213 aaPredicted RBP10.27□□□□□ -0.77
KPNB1-202ENST00000535458 POLR3EQ9NVU0 708 aa10.27□□□□□ -0.77
KPNB1-202ENST00000535458 KIAA1468Q9P260 1216 aa10.27□□□□□ -0.77
KPNB1-202ENST00000535458 KIF28PB7ZC32 967 aa10.26□□□□□ -0.77
KPNB1-202ENST00000535458 SYNE3Q6ZMZ3 975 aa10.26□□□□□ -0.77
KPNB1-202ENST00000535458 ZFP91Q96JP5 570 aaPredicted RBP10.26□□□□□ -0.77
KPNB1-202ENST00000535458 POLR3GO15318 223 aaPredicted RBP10.26□□□□□ -0.77
KPNB1-202ENST00000535458 PCCAP05165 728 aaPredicted RBP10.26□□□□□ -0.77
KPNB1-202ENST00000535458 IL2RBP14784 551 aa10.26□□□□□ -0.77
KPNB1-202ENST00000535458 DPCR1Q3MIW9 517 aa10.26□□□□□ -0.77
KPNB1-202ENST00000535458 BRAPQ7Z569 592 aa10.26□□□□□ -0.77
KPNB1-202ENST00000535458 FEZ1Q99689 392 aa10.26□□□□□ -0.77
KPNB1-202ENST00000535458 CSF1RP07333 972 aa10.26□□□□□ -0.77
KPNB1-202ENST00000535458 CCZ1BP86790 482 aa10.26□□□□□ -0.77
KPNB1-202ENST00000535458 CCZ1P86791 482 aaPredicted RBP10.26□□□□□ -0.77
KPNB1-202ENST00000535458 TRIM28Q13263 835 aaKnown RBP10.26□□□□□ -0.77
KPNB1-202ENST00000535458 HOMER1Q86YM7 354 aa10.26□□□□□ -0.77
KPNB1-202ENST00000535458 SYNE4Q8N205 404 aa10.26□□□□□ -0.77
KPNB1-202ENST00000535458 TMX1Q9H3N1 280 aa10.26□□□□□ -0.77
KPNB1-202ENST00000535458 NHSL1Q5SYE7 1610 aa10.26□□□□□ -0.77
KPNB1-202ENST00000535458 ZNF202O95125 648 aa10.25□□□□□ -0.77
KPNB1-202ENST00000535458 KIF23Q02241 960 aaPredicted RBP10.25□□□□□ -0.77
KPNB1-202ENST00000535458 METTL24Q5JXM2 366 aa10.25□□□□□ -0.77
KPNB1-202ENST00000535458 KIF6Q6ZMV9 814 aa10.25□□□□□ -0.77
KPNB1-202ENST00000535458 KRT222Q8N1A0 295 aa10.25□□□□□ -0.77
KPNB1-202ENST00000535458 PLA2G12BQ9BX93 195 aa10.25□□□□□ -0.77
KPNB1-202ENST00000535458 DENND2AQ9ULE3 1009 aa10.25□□□□□ -0.77
KPNB1-202ENST00000535458 BIN1O00499 593 aa10.25□□□□□ -0.77
KPNB1-202ENST00000535458 SMC2O95347 1197 aa10.25□□□□□ -0.77
KPNB1-202ENST00000535458 SLC3A2P08195 630 aaKnown RBP10.25□□□□□ -0.77
KPNB1-202ENST00000535458 MCAMP43121 646 aa10.25□□□□□ -0.77
KPNB1-202ENST00000535458 ANO1Q5XXA6 986 aa10.25□□□□□ -0.77
KPNB1-202ENST00000535458 NBPF11Q86T75 865 aa10.25□□□□□ -0.77
KPNB1-202ENST00000535458 ZBTB38Q8NAP3 1195 aaPredicted RBP10.25□□□□□ -0.77
KPNB1-202ENST00000535458 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.25□□□□□ -0.771e-6■■□□□ 14.4
KPNB1-202ENST00000535458 NEDD4P46934 1319 aa10.25□□□□□ -0.77
KPNB1-202ENST00000535458 TNS2Q63HR2 1409 aa10.25□□□□□ -0.77
KPNB1-202ENST00000535458 TRDNQ13061 729 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 SYCP1Q15431 976 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 KMT5BQ4FZB7 885 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 ISM2Q6H9L7 571 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 LDHAL6AQ6ZMR3 332 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 NBPF3Q9H094 633 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 RIPOR2Q9Y4F9 1068 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 PAPPAQ13219 1627 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 ADD2P35612 726 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 GSDMDP57764 484 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 AXDND1Q5T1B0 1012 aaPredicted RBP10.24□□□□□ -0.77
KPNB1-202ENST00000535458 FBXO38Q6PIJ6 1188 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 NYAP1Q6ZVC0 841 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 DNAJC10Q8IXB1 793 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 WDR19Q8NEZ3 1342 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 NKX2-3Q8TAU0 364 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 ABCC12Q96J65 1359 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 AIFM3Q96NN9 605 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 STRN4Q9NRL3 753 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 TMOD3Q9NYL9 352 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 PFKFB1P16118 471 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 GPTP24298 496 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 GTF2E1P29083 439 aaPredicted RBP10.24□□□□□ -0.77
KPNB1-202ENST00000535458 MARCKSP29966 332 aaPredicted RBP10.24□□□□□ -0.77
KPNB1-202ENST00000535458 PTPN21Q16825 1174 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 SLC9C2Q5TAH2 1124 aa10.24□□□□□ -0.77
KPNB1-202ENST00000535458 CYB5R4Q7L1T6 521 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms