RNA–Protein interactions for RNA: ENST00000534749.5

PITPNM1-216, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITPNM1, Length 4,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-216ENST00000534749 SCRN1Q12765 414 aa17.06■□□□□ 0.32
PITPNM1-216ENST00000534749 CRACR2BQ8N4Y2 399 aaPredicted RBP17.06■□□□□ 0.32
PITPNM1-216ENST00000534749 DRC1Q96MC2 740 aa17.06■□□□□ 0.32
PITPNM1-216ENST00000534749 MCM9Q9NXL9 1143 aa17.06■□□□□ 0.32
PITPNM1-216ENST00000534749 PYCARDQ9ULZ3 195 aa17.06■□□□□ 0.32
PITPNM1-216ENST00000534749 ZNF532Q9HCE3 1301 aa17.06■□□□□ 0.32
PITPNM1-216ENST00000534749 FGAP02671 866 aa17.06■□□□□ 0.32
PITPNM1-216ENST00000534749 PTPN21Q16825 1174 aa17.06■□□□□ 0.32
PITPNM1-216ENST00000534749 EPHA10Q5JZY3 1008 aa17.06■□□□□ 0.32
PITPNM1-216ENST00000534749 KRT40Q6A162 431 aa17.06■□□□□ 0.32
PITPNM1-216ENST00000534749 CWC15Q9P013 229 aaKnown RBP17.06■□□□□ 0.32
PITPNM1-216ENST00000534749 RNF17Q9BXT8 1623 aaKnown RBP17.05■□□□□ 0.32
PITPNM1-216ENST00000534749 TMTC2Q8N394 836 aa17.05■□□□□ 0.32
PITPNM1-216ENST00000534749 CCDC148Q8NFR7 591 aa17.05■□□□□ 0.32
PITPNM1-216ENST00000534749 CRNKL1Q9BZJ0 848 aaKnown RBP17.05■□□□□ 0.32
PITPNM1-216ENST00000534749 KIF5BP33176 963 aa17.05■□□□□ 0.32
PITPNM1-216ENST00000534749 KRI1Q8N9T8 703 aaKnown RBP17.05■□□□□ 0.32
PITPNM1-216ENST00000534749 V9GY48 417 aaPredicted RBP17.05■□□□□ 0.32
PITPNM1-216ENST00000534749 E9PCH4 1651 aa17.05■□□□□ 0.32
PITPNM1-216ENST00000534749 CCDC178Q5BJE1 867 aa17.05■□□□□ 0.32
PITPNM1-216ENST00000534749 LLPHQ9BRT6 129 aaKnown RBP17.05■□□□□ 0.32
PITPNM1-216ENST00000534749 KCNH3Q9ULD8 1083 aa17.05■□□□□ 0.32
PITPNM1-216ENST00000534749 MYL5Q02045 173 aa17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 FKBP15Q5T1M5 1219 aa17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 KANK3Q6NY19 840 aa17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 GPIHBP1Q8IV16 184 aa17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 ZNF397Q8NF99 534 aaPredicted RBP17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 GPHNQ9NQX3 736 aaPredicted RBP17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 CCT6AP40227 531 aaKnown RBP17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 TRMT44Q8IYL2 757 aaKnown RBP17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 MYRIPQ8NFW9 859 aa17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 NLRP3Q96P20 1036 aa17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 CRACR2AQ9BSW2 395 aa17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 PUF60Q9UHX1 559 aaKnown RBP17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 TRIM21P19474 475 aaKnown RBP17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 RPGRQ92834 1020 aaKnown RBP17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 TSPYL1Q9H0U9 437 aa17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 SSH2Q76I76 1423 aa17.04■□□□□ 0.32
PITPNM1-216ENST00000534749 STAT6P42226 847 aa17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 ABCA9Q8IUA7 1624 aa17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 PNPLA6Q8IY17 1366 aa17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 TSPY3P0CV98 308 aa17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 TSPY8P0CW00 308 aa17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 HAUS7Q99871 368 aa17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 CDK12Q9NYV4 1490 aaPredicted RBP17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 FANCCQ00597 558 aa17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 ZNF287Q9HBT7 754 aa17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 COPRSQ9NQ92 184 aa17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 JADE2Q9NQC1 790 aa17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 ABCA6Q8N139 1617 aa17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 ZNF500O60304 480 aaPredicted RBP17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 BMS1Q14692 1282 aaKnown RBP17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 SETDB2Q96T68 719 aa17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 XPO4Q9C0E2 1151 aaKnown RBP17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 AXIN2Q9Y2T1 843 aa17.03■□□□□ 0.32
PITPNM1-216ENST00000534749 MYSM1Q5VVJ2 828 aa17.02■□□□□ 0.32
PITPNM1-216ENST00000534749 SPTY2D1Q68D10 685 aaPredicted RBP17.02■□□□□ 0.32
PITPNM1-216ENST00000534749 KRT222Q8N1A0 295 aa17.02■□□□□ 0.32
PITPNM1-216ENST00000534749 CCDC94Q9BW85 323 aaPredicted RBP17.02■□□□□ 0.32
PITPNM1-216ENST00000534749 SH3TC1Q8TE82 1336 aa17.02■□□□□ 0.32
PITPNM1-216ENST00000534749 MYO1BO43795 1136 aa17.02■□□□□ 0.32
PITPNM1-216ENST00000534749 TCIRG1Q13488 830 aa17.02■□□□□ 0.32
PITPNM1-216ENST00000534749 GJB4Q9NTQ9 266 aa17.02■□□□□ 0.32
PITPNM1-216ENST00000534749 ERCC3P19447 782 aa17.02■□□□□ 0.31
PITPNM1-216ENST00000534749 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.02■□□□□ 0.31
PITPNM1-216ENST00000534749 SPHKAPQ2M3C7 1700 aa17.02■□□□□ 0.31
PITPNM1-216ENST00000534749 SETQ01105 290 aaPredicted RBP17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 POLA2Q14181 598 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 NECTIN1Q15223 517 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 ZNF827Q17R98 1081 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 BCL2L12Q9HB09 334 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 PTPN12Q05209 780 aaKnown RBP17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 PICALMQ13492 652 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 PNOCQ13519 176 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 TCERG1LQ5VWI1 586 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 LUC7LQ9NQ29 371 aaKnown RBP17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 PCDHA7Q9UN72 937 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 GLI2P10070 1586 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 LRRC7Q96NW7 1537 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 PHACTR2O75167 634 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 BAG3O95817 575 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 CHGBP05060 677 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 CLIC6Q96NY7 704 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 ASAP1Q9ULH1 1129 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 ELP1O95163 1332 aa17.01■□□□□ 0.31
PITPNM1-216ENST00000534749 IGKV5-2P06315 115 aa17■□□□□ 0.31
PITPNM1-216ENST00000534749 PDIA3P30101 505 aaKnown RBP17■□□□□ 0.31
PITPNM1-216ENST00000534749 RFC4P35249 363 aa17■□□□□ 0.31
PITPNM1-216ENST00000534749 UIMC1Q96RL1 719 aa17■□□□□ 0.31
PITPNM1-216ENST00000534749 VPS16Q9H269 839 aa17■□□□□ 0.31
PITPNM1-216ENST00000534749 TFCP2L1Q9NZI6 479 aa17■□□□□ 0.31
PITPNM1-216ENST00000534749 LMAN1P49257 510 aa17■□□□□ 0.31
PITPNM1-216ENST00000534749 ODF2Q5BJF6 829 aa17■□□□□ 0.31
PITPNM1-216ENST00000534749 DSCC1Q9BVC3 393 aa17■□□□□ 0.31
PITPNM1-216ENST00000534749 CLIC4Q9Y696 253 aa17■□□□□ 0.31
PITPNM1-216ENST00000534749 ELF2Q15723 593 aa17■□□□□ 0.31
PITPNM1-216ENST00000534749 IL25Q9H293 177 aa17■□□□□ 0.31
PITPNM1-216ENST00000534749 NFE2L3Q9Y4A8 694 aa17■□□□□ 0.31
PITPNM1-216ENST00000534749 MRVI1Q9Y6F6 885 aa17■□□□□ 0.31
PITPNM1-216ENST00000534749 AKR1B10O60218 316 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms