RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 USP17L1Q7RTZ2 530 aa11.13□□□□□ -0.63
CDC27-208ENST00000532575 PLEKHM2Q8IWE5 1019 aa11.13□□□□□ -0.63
CDC27-208ENST00000532575 PURBQ96QR8 312 aaKnown RBP11.13□□□□□ -0.63
CDC27-208ENST00000532575 ZBTB1Q9Y2K1 713 aa11.13□□□□□ -0.63
CDC27-208ENST00000532575 MAFBQ9Y5Q3 323 aaPredicted RBP11.13□□□□□ -0.63
CDC27-208ENST00000532575 ATP5J2-PTCD1G3V325 749 aa11.12□□□□□ -0.63
CDC27-208ENST00000532575 LZTS3O60299 673 aaPredicted RBP11.12□□□□□ -0.63
CDC27-208ENST00000532575 UPP2O95045 317 aa11.12□□□□□ -0.63
CDC27-208ENST00000532575 CANXP27824 592 aaKnown RBP11.12□□□□□ -0.63
CDC27-208ENST00000532575 CYP2U1Q7Z449 544 aa11.12□□□□□ -0.63
CDC27-208ENST00000532575 NPM2Q86SE8 214 aaKnown RBP11.12□□□□□ -0.63
CDC27-208ENST00000532575 TTC5Q8N0Z6 440 aa11.12□□□□□ -0.63
CDC27-208ENST00000532575 ZNF622Q969S3 477 aaKnown RBP eCLIP11.12□□□□□ -0.631e-7■□□□□ 9.8
CDC27-208ENST00000532575 ZFP42Q96MM3 310 aa11.12□□□□□ -0.63
CDC27-208ENST00000532575 BRIP1Q9BX63 1249 aa11.12□□□□□ -0.63
CDC27-208ENST00000532575 TEX13AQ9BXU3 409 aaPredicted RBP11.12□□□□□ -0.63
CDC27-208ENST00000532575 GMPR2Q9P2T1 348 aaKnown RBP11.12□□□□□ -0.63
CDC27-208ENST00000532575 NFKBIEO00221 500 aa11.11□□□□□ -0.63
CDC27-208ENST00000532575 HSPA5P11021 654 aaKnown RBP11.11□□□□□ -0.63
CDC27-208ENST00000532575 BMP2P12643 396 aa11.11□□□□□ -0.63
CDC27-208ENST00000532575 PTGIRP43119 386 aa11.11□□□□□ -0.63
CDC27-208ENST00000532575 EIF5P55010 431 aaKnown RBP11.11□□□□□ -0.63
CDC27-208ENST00000532575 SCARF1Q14162 830 aa11.11□□□□□ -0.63
CDC27-208ENST00000532575 BICDL1Q6ZP65 573 aa11.11□□□□□ -0.63
CDC27-208ENST00000532575 ZNF395Q9H8N7 513 aaPredicted RBP11.11□□□□□ -0.63
CDC27-208ENST00000532575 TJP1Q07157 1748 aa11.1□□□□□ -0.63
CDC27-208ENST00000532575 SOGA3Q5TF21 947 aa11.1□□□□□ -0.63
CDC27-208ENST00000532575 CNKSR1Q969H4 720 aa11.1□□□□□ -0.63
CDC27-208ENST00000532575 SBF1O95248 1867 aa11.09□□□□□ -0.63
CDC27-208ENST00000532575 POTECB2RU33 542 aa11.09□□□□□ -0.63
CDC27-208ENST00000532575 NPHP1O15259 732 aa11.09□□□□□ -0.63
CDC27-208ENST00000532575 C21orf2O43822 256 aa11.09□□□□□ -0.63
CDC27-208ENST00000532575 DIAPH1O60610 1272 aaKnown RBP11.09□□□□□ -0.63
CDC27-208ENST00000532575 HMOX1P09601 288 aa11.09□□□□□ -0.63
CDC27-208ENST00000532575 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
CDC27-208ENST00000532575 NOD1Q9Y239 953 aa11.09□□□□□ -0.63
CDC27-208ENST00000532575 LTBP3Q9NS15 1303 aa11.09□□□□□ -0.63
CDC27-208ENST00000532575 ADAMTS7Q9UKP4 1686 aa11.08□□□□□ -0.64
CDC27-208ENST00000532575 PCNTO95613 3336 aa11.08□□□□□ -0.64
CDC27-208ENST00000532575 MRC1P22897 1456 aa11.08□□□□□ -0.64
CDC27-208ENST00000532575 SPINT1O43278 529 aa11.08□□□□□ -0.64
CDC27-208ENST00000532575 LMOD1P29536 600 aaPredicted RBP11.08□□□□□ -0.64
CDC27-208ENST00000532575 TEFQ10587 303 aa11.08□□□□□ -0.64
CDC27-208ENST00000532575 TBC1D9BQ66K14 1250 aa11.08□□□□□ -0.64
CDC27-208ENST00000532575 SETDB2Q96T68 719 aa11.08□□□□□ -0.64
CDC27-208ENST00000532575 TAOK3Q9H2K8 898 aa11.08□□□□□ -0.64
CDC27-208ENST00000532575 CARMIL3Q8ND23 1372 aa11.07□□□□□ -0.64
CDC27-208ENST00000532575 IQCA1LA6NCM1 817 aa11.07□□□□□ -0.64
CDC27-208ENST00000532575 IL6STP40189 918 aaPredicted RBP11.07□□□□□ -0.64
CDC27-208ENST00000532575 ST5P78524 1137 aa11.07□□□□□ -0.64
CDC27-208ENST00000532575 STYK1Q6J9G0 422 aa11.07□□□□□ -0.64
CDC27-208ENST00000532575 PRR5LQ6MZQ0 368 aa11.07□□□□□ -0.64
CDC27-208ENST00000532575 CCDC97Q96F63 343 aaPredicted RBP11.07□□□□□ -0.64
CDC27-208ENST00000532575 SENP2Q9HC62 589 aa11.07□□□□□ -0.64
CDC27-208ENST00000532575 SERPINA10Q9UK55 444 aa11.07□□□□□ -0.64
CDC27-208ENST00000532575 PCDHGA11Q9Y5H2 935 aa11.07□□□□□ -0.64
CDC27-208ENST00000532575 SCN11AQ9UI33 1791 aa11.07□□□□□ -0.64
CDC27-208ENST00000532575 NRXN2Q9P2S2 1712 aa11.06□□□□□ -0.64
CDC27-208ENST00000532575 A0A1W2PRU2 124 aa11.06□□□□□ -0.64
CDC27-208ENST00000532575 STAU1O95793 577 aaKnown RBP11.06□□□□□ -0.64
CDC27-208ENST00000532575 GNRH1P01148 92 aa11.06□□□□□ -0.64
CDC27-208ENST00000532575 ZNF790Q6PG37 636 aa11.06□□□□□ -0.64
CDC27-208ENST00000532575 CCDC82Q8N4S0 544 aa11.06□□□□□ -0.64
CDC27-208ENST00000532575 CNBD1Q8NA66 436 aa11.06□□□□□ -0.64
CDC27-208ENST00000532575 GAS2L2Q8NHY3 880 aa11.06□□□□□ -0.64
CDC27-208ENST00000532575 MASTLQ96GX5 879 aa11.06□□□□□ -0.64
CDC27-208ENST00000532575 ZNF496Q96IT1 587 aaPredicted RBP11.06□□□□□ -0.64
CDC27-208ENST00000532575 TRIM47Q96LD4 638 aa11.06□□□□□ -0.64
CDC27-208ENST00000532575 FMNL2Q96PY5 1086 aa11.06□□□□□ -0.64
CDC27-208ENST00000532575 INSM2Q96T92 566 aaPredicted RBP11.06□□□□□ -0.64
CDC27-208ENST00000532575 ARHGEF10LQ9HCE6 1279 aa11.06□□□□□ -0.64
CDC27-208ENST00000532575 RAB6BQ9NRW1 208 aa11.06□□□□□ -0.64
CDC27-208ENST00000532575 MKRN1Q9UHC7 482 aaKnown RBP11.06□□□□□ -0.64
CDC27-208ENST00000532575 HEG1Q9ULI3 1381 aa11.05□□□□□ -0.64
CDC27-208ENST00000532575 GNAT3A8MTJ3 354 aa11.05□□□□□ -0.64
CDC27-208ENST00000532575 DDNO94850 711 aaPredicted RBP11.05□□□□□ -0.64
CDC27-208ENST00000532575 GTF2IP78347 998 aa11.05□□□□□ -0.64
CDC27-208ENST00000532575 LDHDQ86WU2 507 aa11.05□□□□□ -0.64
CDC27-208ENST00000532575 KIFC2Q96AC6 838 aa11.05□□□□□ -0.64
CDC27-208ENST00000532575 AIDAQ96BJ3 306 aa11.05□□□□□ -0.64
CDC27-208ENST00000532575 SRGNP10124 158 aa11.04□□□□□ -0.64
CDC27-208ENST00000532575 RFX1P22670 979 aa11.04□□□□□ -0.64
CDC27-208ENST00000532575 CTSOP43234 321 aaPredicted RBP11.04□□□□□ -0.64
CDC27-208ENST00000532575 PRPF40BQ6NWY9 871 aaKnown RBP11.04□□□□□ -0.64
CDC27-208ENST00000532575 PCGF6Q9BYE7 350 aa11.04□□□□□ -0.64
CDC27-208ENST00000532575 PRDM10Q9NQV6 1147 aa11.04□□□□□ -0.64
CDC27-208ENST00000532575 AFDNP55196 1824 aaKnown RBP11.04□□□□□ -0.64
CDC27-208ENST00000532575 MEN1O00255 615 aa11.03□□□□□ -0.64
CDC27-208ENST00000532575 A1BGP04217 495 aa11.03□□□□□ -0.64
CDC27-208ENST00000532575 SNRPBP14678 240 aaKnown RBP11.03□□□□□ -0.64
CDC27-208ENST00000532575 CLEC4GQ6UXB4 293 aa11.03□□□□□ -0.64
CDC27-208ENST00000532575 TRIM50Q86XT4 487 aa11.03□□□□□ -0.64
CDC27-208ENST00000532575 IL17REQ8NFR9 667 aa11.03□□□□□ -0.64
CDC27-208ENST00000532575 ETNK1Q9HBU6 452 aa11.03□□□□□ -0.64
CDC27-208ENST00000532575 POLMQ9NP87 494 aaPredicted RBP11.03□□□□□ -0.64
CDC27-208ENST00000532575 ZNF652Q9Y2D9 606 aa11.03□□□□□ -0.64
CDC27-208ENST00000532575 DLEC1Q9Y238 1755 aa11.03□□□□□ -0.64
CDC27-208ENST00000532575 CNTNAP1P78357 1384 aa11.03□□□□□ -0.64
CDC27-208ENST00000532575 TMEM88BA6NKF7 163 aa11.02□□□□□ -0.65
CDC27-208ENST00000532575 CAMTA2O94983 1202 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms