RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-222ENST00000527718 EMILIN3Q9NT22 766 aa7.46□□□□□ -1.22
PABPC4-222ENST00000527718 RIPOR2Q9Y4F9 1068 aa7.46□□□□□ -1.22
PABPC4-222ENST00000527718 RPAP1Q9BWH6 1393 aaPredicted RBP7.46□□□□□ -1.22
PABPC4-222ENST00000527718 SPEF2Q9C093 1822 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 GOLIM4O00461 696 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 DHX16O60231 1041 aaKnown RBP7.45□□□□□ -1.22
PABPC4-222ENST00000527718 FRAT2O75474 233 aaPredicted RBP7.45□□□□□ -1.22
PABPC4-222ENST00000527718 PHF14O94880 888 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 NCLP19338 710 aaKnown RBP7.45□□□□□ -1.22
PABPC4-222ENST00000527718 BRD2P25440 801 aaKnown RBP7.45□□□□□ -1.22
PABPC4-222ENST00000527718 BCAMP50895 628 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 UBE3CQ15386 1083 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 IMMTQ16891 758 aaKnown RBP7.45□□□□□ -1.22
PABPC4-222ENST00000527718 TSGA10IPQ3SY00 556 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 TSHZ3Q63HK5 1081 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 TYW1BQ6NUM6 668 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 SLF2Q8IX21 1173 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 LINC00116Q8NCU8 138 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 KLHDC4Q8TBB5 520 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 APPBP2Q92624 585 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 RPGRQ92834 1020 aaKnown RBP7.45□□□□□ -1.22
PABPC4-222ENST00000527718 MAP4K1Q92918 833 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 DDX27Q96GQ7 796 aaKnown RBP7.45□□□□□ -1.22
PABPC4-222ENST00000527718 RBM17Q96I25 401 aaKnown RBP7.45□□□□□ -1.22
PABPC4-222ENST00000527718 ALDH8A1Q9H2A2 487 aaPredicted RBP7.45□□□□□ -1.22
PABPC4-222ENST00000527718 DENND2AQ9ULE3 1009 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 LIMCH1Q9UPQ0 1083 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 PDS5AQ29RF7 1337 aaKnown RBP7.45□□□□□ -1.22
PABPC4-222ENST00000527718 BTAF1O14981 1849 aa7.45□□□□□ -1.22
PABPC4-222ENST00000527718 RREB1Q92766 1687 aa7.44□□□□□ -1.22
PABPC4-222ENST00000527718 RIC1Q4ADV7 1423 aa7.44□□□□□ -1.22
PABPC4-222ENST00000527718 TJP1Q07157 1748 aa7.44□□□□□ -1.22
PABPC4-222ENST00000527718 LCE2BO14633 110 aa7.44□□□□□ -1.22
PABPC4-222ENST00000527718 MAP4K4O95819 1239 aaPredicted RBP7.44□□□□□ -1.22
PABPC4-222ENST00000527718 ARID4AP29374 1257 aaPredicted RBP7.44□□□□□ -1.22
PABPC4-222ENST00000527718 TIMM10P62072 90 aa7.44□□□□□ -1.22
PABPC4-222ENST00000527718 RPS8P62241 208 aaKnown RBP7.44□□□□□ -1.22
PABPC4-222ENST00000527718 EN1Q05925 392 aaPredicted RBP7.44□□□□□ -1.22
PABPC4-222ENST00000527718 NMIQ13287 307 aaPredicted RBP7.44□□□□□ -1.22
PABPC4-222ENST00000527718 LRRC24Q50LG9 513 aa7.44□□□□□ -1.22
PABPC4-222ENST00000527718 USPL1Q5W0Q7 1092 aa7.44□□□□□ -1.22
PABPC4-222ENST00000527718 AMOTL1Q8IY63 956 aa7.44□□□□□ -1.22
PABPC4-222ENST00000527718 JARID2Q92833 1246 aaPredicted RBP7.44□□□□□ -1.22
PABPC4-222ENST00000527718 ZFRQ96KR1 1074 aaKnown RBP7.44□□□□□ -1.22
PABPC4-222ENST00000527718 NOL10Q9BSC4 688 aaKnown RBP7.44□□□□□ -1.22
PABPC4-222ENST00000527718 LSG1Q9H089 658 aaKnown RBP7.44□□□□□ -1.22
PABPC4-222ENST00000527718 SLKQ9H2G2 1235 aaPredicted RBP7.44□□□□□ -1.22
PABPC4-222ENST00000527718 PDRG1Q9NUG6 133 aa7.44□□□□□ -1.22
PABPC4-222ENST00000527718 LEMD3Q9Y2U8 911 aa7.44□□□□□ -1.22
PABPC4-222ENST00000527718 RBM8AQ9Y5S9 174 aaKnown RBP7.44□□□□□ -1.22
PABPC4-222ENST00000527718 UBN2Q6ZU65 1347 aa7.44□□□□□ -1.22
PABPC4-222ENST00000527718 FAM177BA6PVY3 158 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 GTPBP6O43824 516 aaPredicted RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 BBOX1O75936 387 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 SLC3A2P08195 630 aaKnown RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 PCP11498 1178 aaKnown RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 HCLS1P14317 486 aaPredicted RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 CASTP20810 708 aaKnown RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 GSTO1P78417 241 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 PDE4CQ08493 712 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 LAPTM4AQ15012 233 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 SART3Q15020 963 aaKnown RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 GRIPAP1Q4V328 841 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 ZMYM1Q5SVZ6 1142 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 PRPF40BQ6NWY9 871 aaKnown RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 CPLX2Q6PUV4 134 aaKnown RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 RUFY3Q7L099 469 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 RALYLQ86SE5 291 aaKnown RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 ARHGEF1Q92888 912 aaKnown RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 KCNB2Q92953 911 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 AIDAQ96BJ3 306 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 JAKMIP1Q96N16 626 aaKnown RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 CAMKK2Q96RR4 588 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 RNF41Q9H4P4 317 aaPredicted RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 CNNM2Q9H8M5 875 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 TFCP2L1Q9NZI6 479 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 ISY1Q9ULR0 285 aaKnown RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 WDR33Q9C0J8 1336 aaKnown RBP7.43□□□□□ -1.22
PABPC4-222ENST00000527718 ANKRD36CQ5JPF3 1778 aa7.43□□□□□ -1.22
PABPC4-222ENST00000527718 RGPD3A6NKT7 1758 aaPredicted RBP7.42□□□□□ -1.22
PABPC4-222ENST00000527718 RGPD4Q7Z3J3 1758 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.42□□□□□ -1.22
PABPC4-222ENST00000527718 ALDH1B1P30837 517 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 PDE6BP35913 854 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 MAP3K9P80192 1104 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 KCNC4Q03721 635 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 EZH2Q15910 746 aaKnown RBP7.42□□□□□ -1.22
PABPC4-222ENST00000527718 CREB3L3Q68CJ9 461 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 CCDC102BQ68D86 513 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 BICDL1Q6ZP65 573 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 ZNF804AQ7Z570 1209 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 SPATA5Q8NB90 893 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 ZNF594Q96JF6 807 aaPredicted RBP7.42□□□□□ -1.22
PABPC4-222ENST00000527718 NEK1Q96PY6 1258 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 LARP6Q9BRS8 491 aaKnown RBP7.42□□□□□ -1.22
PABPC4-222ENST00000527718 ZNF287Q9HBT7 754 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 WBP1LQ9NX94 342 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 TLR7Q9NYK1 1049 aaKnown RBP7.42□□□□□ -1.22
PABPC4-222ENST00000527718 LRP2BPQ9P2M1 347 aa7.42□□□□□ -1.22
PABPC4-222ENST00000527718 SMC3Q9UQE7 1217 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms