RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
CLNS1A-207ENST00000527133 TAF7LQ5H9L4 462 aa16.55■□□□□ 0.24
CLNS1A-207ENST00000527133 FAM43AQ8N2R8 423 aa16.55■□□□□ 0.24
CLNS1A-207ENST00000527133 SH3TC2Q8TF17 1288 aa16.55■□□□□ 0.24
CLNS1A-207ENST00000527133 ZNF594Q96JF6 807 aaPredicted RBP16.55■□□□□ 0.24
CLNS1A-207ENST00000527133 TMEM39BQ9GZU3 492 aa16.55■□□□□ 0.24
CLNS1A-207ENST00000527133 SERPINA10Q9UK55 444 aa16.55■□□□□ 0.24
CLNS1A-207ENST00000527133 CSADQ9Y600 493 aa16.55■□□□□ 0.24
CLNS1A-207ENST00000527133 H0YGN5 161 aa16.54■□□□□ 0.24
CLNS1A-207ENST00000527133 CCDC57Q2TAC2 916 aa16.54■□□□□ 0.24
CLNS1A-207ENST00000527133 LMBR1LQ6UX01 489 aa16.54■□□□□ 0.24
CLNS1A-207ENST00000527133 LDHAL6AQ6ZMR3 332 aa16.54■□□□□ 0.24
CLNS1A-207ENST00000527133 DZIP1LQ8IYY4 767 aaKnown RBP16.54■□□□□ 0.24
CLNS1A-207ENST00000527133 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.54■□□□□ 0.24
CLNS1A-207ENST00000527133 CNNM1Q9NRU3 951 aa16.54■□□□□ 0.24
CLNS1A-207ENST00000527133 GYG1P46976 350 aa16.53■□□□□ 0.24
CLNS1A-207ENST00000527133 TDRD7Q8NHU6 1098 aaKnown RBP16.53■□□□□ 0.24
CLNS1A-207ENST00000527133 ARHGAP39Q9C0H5 1083 aa16.53■□□□□ 0.24
CLNS1A-207ENST00000527133 WDHD1O75717 1129 aaPredicted RBP16.52■□□□□ 0.24
CLNS1A-207ENST00000527133 CRKP46108 304 aa16.52■□□□□ 0.24
CLNS1A-207ENST00000527133 TNNI2P48788 182 aa16.52■□□□□ 0.24
CLNS1A-207ENST00000527133 EPHA10Q5JZY3 1008 aa16.52■□□□□ 0.24
CLNS1A-207ENST00000527133 WWC1Q8IX03 1113 aa16.52■□□□□ 0.24
CLNS1A-207ENST00000527133 ZSWIM8A7E2V4 1837 aa16.52■□□□□ 0.23
CLNS1A-207ENST00000527133 ARAP2Q8WZ64 1704 aa16.51■□□□□ 0.23
CLNS1A-207ENST00000527133 SPDYE5A6NIY4 337 aa16.51■□□□□ 0.23
CLNS1A-207ENST00000527133 F6X3S4 739 aa16.51■□□□□ 0.23
CLNS1A-207ENST00000527133 TLR2O60603 784 aa16.51■□□□□ 0.23
CLNS1A-207ENST00000527133 ECM2O94769 699 aaPredicted RBP16.51■□□□□ 0.23
CLNS1A-207ENST00000527133 HIBADHP31937 336 aaKnown RBP16.51■□□□□ 0.23
CLNS1A-207ENST00000527133 KIF22Q14807 665 aa16.51■□□□□ 0.23
CLNS1A-207ENST00000527133 BTBD19C9JJ37 291 aa16.5■□□□□ 0.23
CLNS1A-207ENST00000527133 CETPP11597 493 aa16.5■□□□□ 0.23
CLNS1A-207ENST00000527133 CACNB3P54284 484 aa16.5■□□□□ 0.23
CLNS1A-207ENST00000527133 LACTBP83111 547 aaPredicted RBP16.5■□□□□ 0.23
CLNS1A-207ENST00000527133 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
CLNS1A-207ENST00000527133 BEND3Q5T5X7 828 aa16.5■□□□□ 0.23
CLNS1A-207ENST00000527133 FAM84BQ96KN1 310 aaPredicted RBP16.5■□□□□ 0.23
CLNS1A-207ENST00000527133 SNCAIPQ9Y6H5 919 aa16.5■□□□□ 0.23
CLNS1A-207ENST00000527133 GRM8O00222 908 aa16.49■□□□□ 0.23
CLNS1A-207ENST00000527133 UBE4AQ14139 1066 aa16.49■□□□□ 0.23
CLNS1A-207ENST00000527133 GRIK5Q16478 980 aa16.49■□□□□ 0.23
CLNS1A-207ENST00000527133 CHRDL2Q6WN34 429 aa16.49■□□□□ 0.23
CLNS1A-207ENST00000527133 WRNIP1Q96S55 665 aa16.49■□□□□ 0.23
CLNS1A-207ENST00000527133 IL16Q14005 1332 aa16.48■□□□□ 0.23
CLNS1A-207ENST00000527133 FANCIQ9NVI1 1328 aa16.48■□□□□ 0.23
CLNS1A-207ENST00000527133 CHAF1AQ13111 956 aaPredicted RBP16.48■□□□□ 0.23
CLNS1A-207ENST00000527133 SNAPC2Q13487 334 aa16.48■□□□□ 0.23
CLNS1A-207ENST00000527133 ERO1BQ86YB8 467 aa16.48■□□□□ 0.23
CLNS1A-207ENST00000527133 ZKSCAN4Q969J2 545 aaPredicted RBP16.48■□□□□ 0.23
CLNS1A-207ENST00000527133 ZCCHC17Q9NP64 241 aaKnown RBP16.48■□□□□ 0.23
CLNS1A-207ENST00000527133 IQSEC3Q9UPP2 1182 aaPredicted RBP16.48■□□□□ 0.23
CLNS1A-207ENST00000527133 IRF6O14896 467 aa16.47■□□□□ 0.23
CLNS1A-207ENST00000527133 GNRH1P01148 92 aa16.47■□□□□ 0.23
CLNS1A-207ENST00000527133 MTFR1Q15390 333 aa16.47■□□□□ 0.23
CLNS1A-207ENST00000527133 DPF3Q92784 378 aa16.47■□□□□ 0.23
CLNS1A-207ENST00000527133 SHISA4Q96DD7 197 aa16.47■□□□□ 0.23
CLNS1A-207ENST00000527133 PUS3Q9BZE2 481 aaKnown RBP16.47■□□□□ 0.23
CLNS1A-207ENST00000527133 CACNA1FO60840 1977 aa16.46■□□□□ 0.23
CLNS1A-207ENST00000527133 VAMP4O75379 141 aa16.46■□□□□ 0.23
CLNS1A-207ENST00000527133 PRMT2P55345 433 aa16.46■□□□□ 0.23
CLNS1A-207ENST00000527133 PPIL2Q13356 520 aa16.46■□□□□ 0.23
CLNS1A-207ENST00000527133 VPS37DQ86XT2 251 aa16.46■□□□□ 0.23
CLNS1A-207ENST00000527133 TEKT1Q969V4 418 aa16.46■□□□□ 0.23
CLNS1A-207ENST00000527133 C9orf78Q9NZ63 289 aaPredicted RBP16.46■□□□□ 0.23
CLNS1A-207ENST00000527133 A0A0C4DFX4 3053 aa16.45■□□□□ 0.22
CLNS1A-207ENST00000527133 FRAT2O75474 233 aaPredicted RBP16.45■□□□□ 0.22
CLNS1A-207ENST00000527133 TMOD2Q9NZR1 351 aa16.45■□□□□ 0.22
CLNS1A-207ENST00000527133 RBM27Q9P2N5 1060 aaKnown RBP16.45■□□□□ 0.22
CLNS1A-207ENST00000527133 CPA4Q9UI42 421 aa16.45■□□□□ 0.22
CLNS1A-207ENST00000527133 COL6A3P12111 3177 aa16.44■□□□□ 0.22
CLNS1A-207ENST00000527133 CTGFP29279 349 aa16.44■□□□□ 0.22
CLNS1A-207ENST00000527133 PSMC4P43686 418 aa16.44■□□□□ 0.22
CLNS1A-207ENST00000527133 HDLBPQ00341 1268 aaKnown RBP16.44■□□□□ 0.22
CLNS1A-207ENST00000527133 EXOSC9Q06265 439 aaKnown RBP16.44■□□□□ 0.22
CLNS1A-207ENST00000527133 CCDC184Q52MB2 194 aa16.44■□□□□ 0.22
CLNS1A-207ENST00000527133 C17orf99Q6UX52 265 aa16.44■□□□□ 0.22
CLNS1A-207ENST00000527133 FBXO33Q7Z6M2 555 aa16.44■□□□□ 0.22
CLNS1A-207ENST00000527133 TBC1D22AQ8WUA7 517 aa16.44■□□□□ 0.22
CLNS1A-207ENST00000527133 HOOK2Q96ED9 719 aa16.44■□□□□ 0.22
CLNS1A-207ENST00000527133 TRIM47Q96LD4 638 aa16.44■□□□□ 0.22
CLNS1A-207ENST00000527133 SRRDQ9UH36 339 aa16.44■□□□□ 0.22
CLNS1A-207ENST00000527133 LAMA3Q16787 3333 aa16.44■□□□□ 0.22
CLNS1A-207ENST00000527133 FAM83AQ86UY5 434 aa16.43■□□□□ 0.22
CLNS1A-207ENST00000527133 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.43■□□□□ 0.22
CLNS1A-207ENST00000527133 RAET1EQ8TD07 263 aa16.43■□□□□ 0.22
CLNS1A-207ENST00000527133 SUCLG2Q96I99 432 aa16.43■□□□□ 0.22
CLNS1A-207ENST00000527133 ZDHHC15Q96MV8 337 aa16.43■□□□□ 0.22
CLNS1A-207ENST00000527133 RIPOR2Q9Y4F9 1068 aa16.43■□□□□ 0.22
CLNS1A-207ENST00000527133 MROH5Q6ZUA9 1318 aa16.43■□□□□ 0.22
CLNS1A-207ENST00000527133 FMNL1O95466 1100 aaPredicted RBP16.42■□□□□ 0.22
CLNS1A-207ENST00000527133 OSBPP22059 807 aa16.42■□□□□ 0.22
CLNS1A-207ENST00000527133 GRK4P32298 578 aa16.42■□□□□ 0.22
CLNS1A-207ENST00000527133 PPATQ06203 517 aa16.42■□□□□ 0.22
CLNS1A-207ENST00000527133 CAVIN4Q5BKX8 364 aa16.42■□□□□ 0.22
CLNS1A-207ENST00000527133 DCAF15Q66K64 600 aa16.42■□□□□ 0.22
CLNS1A-207ENST00000527133 APOBEC3HQ6NTF7 200 aaKnown RBP16.42■□□□□ 0.22
CLNS1A-207ENST00000527133 SLC4A10Q6U841 1118 aa16.42■□□□□ 0.22
CLNS1A-207ENST00000527133 MIGA2Q7L4E1 593 aa16.42■□□□□ 0.22
CLNS1A-207ENST00000527133 NKX2-3Q8TAU0 364 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms