RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 WDHD1O75717 1129 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-217ENST00000524534 ANTXR2P58335 489 aa13.32□□□□□ -0.28
PTPRK-217ENST00000524534 ETF1P62495 437 aaKnown RBP13.32□□□□□ -0.28
PTPRK-217ENST00000524534 BMS1Q14692 1282 aaKnown RBP13.32□□□□□ -0.28
PTPRK-217ENST00000524534 SLC39A14Q15043 492 aa13.32□□□□□ -0.28
PTPRK-217ENST00000524534 MROH7-TTC4A0A0A0MT08 1334 aa13.32□□□□□ -0.28
PTPRK-217ENST00000524534 PHLPP2Q6ZVD8 1323 aa13.32□□□□□ -0.28
PTPRK-217ENST00000524534 NBPF26B4DH59 902 aa13.32□□□□□ -0.28
PTPRK-217ENST00000524534 FGAP02671 866 aa13.32□□□□□ -0.28
PTPRK-217ENST00000524534 HAND2P61296 217 aa13.32□□□□□ -0.28
PTPRK-217ENST00000524534 LRRFIP1Q32MZ4 808 aaKnown RBP13.32□□□□□ -0.28
PTPRK-217ENST00000524534 NBPF14Q5TI25 921 aa13.32□□□□□ -0.28
PTPRK-217ENST00000524534 NBPF10Q6P3W6 841 aaKnown RBP13.32□□□□□ -0.28
PTPRK-217ENST00000524534 NBPF15Q8N660 670 aa13.32□□□□□ -0.28
PTPRK-217ENST00000524534 SYTL4Q96C24 671 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-217ENST00000524534 ZNF594Q96JF6 807 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-217ENST00000524534 TMX1Q9H3N1 280 aa13.32□□□□□ -0.28
PTPRK-217ENST00000524534 GJB4Q9NTQ9 266 aa13.32□□□□□ -0.28
PTPRK-217ENST00000524534 WDR19Q8NEZ3 1342 aa13.32□□□□□ -0.28
PTPRK-217ENST00000524534 KIF1AQ12756 1690 aa13.32□□□□□ -0.28
PTPRK-217ENST00000524534 NPHP1O15259 732 aa13.31□□□□□ -0.28
PTPRK-217ENST00000524534 ZFYP08048 801 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-217ENST00000524534 ATP1A3P13637 1013 aa13.31□□□□□ -0.28
PTPRK-217ENST00000524534 LMOD1P29536 600 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-217ENST00000524534 HPSEQ9Y251 543 aa13.31□□□□□ -0.28
PTPRK-217ENST00000524534 FHOD1Q9Y613 1164 aa13.31□□□□□ -0.28
PTPRK-217ENST00000524534 FAM237AA0A1B0GTK4 181 aa13.31□□□□□ -0.28
PTPRK-217ENST00000524534 CPLX1O14810 134 aa13.31□□□□□ -0.28
PTPRK-217ENST00000524534 CLCN6P51797 869 aa13.31□□□□□ -0.28
PTPRK-217ENST00000524534 TRIM65Q6PJ69 517 aa13.31□□□□□ -0.28
PTPRK-217ENST00000524534 CREBRFQ8IUR6 639 aa13.31□□□□□ -0.28
PTPRK-217ENST00000524534 NCOA7Q8NI08 942 aa13.31□□□□□ -0.28
PTPRK-217ENST00000524534 DDX60Q8IY21 1712 aaKnown RBP13.31□□□□□ -0.28
PTPRK-217ENST00000524534 LAMB4A4D0S4 1761 aa13.31□□□□□ -0.28
PTPRK-217ENST00000524534 TJP1Q07157 1748 aa13.3□□□□□ -0.28
PTPRK-217ENST00000524534 TTLL7Q6ZT98 887 aa13.3□□□□□ -0.28
PTPRK-217ENST00000524534 PUS3Q9BZE2 481 aaKnown RBP13.3□□□□□ -0.28
PTPRK-217ENST00000524534 CBFA2T2O43439 604 aa13.3□□□□□ -0.28
PTPRK-217ENST00000524534 PPP6R2O75170 966 aa13.3□□□□□ -0.28
PTPRK-217ENST00000524534 SYKP43405 635 aa13.3□□□□□ -0.28
PTPRK-217ENST00000524534 CABP4P57796 275 aa13.3□□□□□ -0.28
PTPRK-217ENST00000524534 FKBP4Q02790 459 aaKnown RBP eCLIP13.3□□□□□ -0.28
PTPRK-217ENST00000524534 ARHGAP29Q52LW3 1261 aa13.3□□□□□ -0.28
PTPRK-217ENST00000524534 HOMER1Q86YM7 354 aa13.3□□□□□ -0.28
PTPRK-217ENST00000524534 DPF2Q92785 391 aa13.3□□□□□ -0.28
PTPRK-217ENST00000524534 ST7Q9NRC1 585 aa13.3□□□□□ -0.28
PTPRK-217ENST00000524534 CPDO75976 1380 aa13.3□□□□□ -0.28
PTPRK-217ENST00000524534 MARCKSP29966 332 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-217ENST00000524534 UBASH3AP57075 661 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 MYL5Q02045 173 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 WASHC4Q2M389 1173 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 VSTM4Q8IW00 320 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 REXO1L1PQ8IX06 675 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 CCDC191Q8NCU4 936 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 CEP126Q9P2H0 1117 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 DNAI1Q9UI46 699 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 C4AP0C0L4 1744 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 C4BP0C0L5 1744 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 MYO1BO43795 1136 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 PTPAQ15257 358 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 CCDC158Q5M9N0 1113 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 ISM2Q6H9L7 571 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 SHC4Q6S5L8 630 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 FCHSD1Q86WN1 690 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 RAB11FIP4Q86YS3 637 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 APPBP2Q92624 585 aa13.29□□□□□ -0.28
PTPRK-217ENST00000524534 SRRTQ9BXP5 876 aaKnown RBP13.29□□□□□ -0.28
PTPRK-217ENST00000524534 NUP188Q5SRE5 1749 aa13.28□□□□□ -0.28
PTPRK-217ENST00000524534 FANCGO15287 622 aa13.28□□□□□ -0.28
PTPRK-217ENST00000524534 ZRANB2O95218 330 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTPRK-217ENST00000524534 TTC39AQ5SRH9 613 aa13.28□□□□□ -0.28
PTPRK-217ENST00000524534 RALYLQ86SE5 291 aaKnown RBP13.28□□□□□ -0.28
PTPRK-217ENST00000524534 XAGE2Q96GT9 111 aa13.28□□□□□ -0.28
PTPRK-217ENST00000524534 PUS7LQ9H0K6 701 aaKnown RBP13.28□□□□□ -0.28
PTPRK-217ENST00000524534 CCDC66A2RUB6 948 aa13.28□□□□□ -0.28
PTPRK-217ENST00000524534 ZNF213O14771 459 aa13.28□□□□□ -0.28
PTPRK-217ENST00000524534 PNMA6AP0CW24 399 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-217ENST00000524534 ADORA1P30542 326 aa13.28□□□□□ -0.28
PTPRK-217ENST00000524534 RESP18Q5W5W9 173 aa13.28□□□□□ -0.28
PTPRK-217ENST00000524534 JMYQ8N9B5 988 aa13.28□□□□□ -0.28
PTPRK-217ENST00000524534 ZMYM6O95789 1325 aa13.28□□□□□ -0.28
PTPRK-217ENST00000524534 ALS2Q96Q42 1657 aa13.28□□□□□ -0.28
PTPRK-217ENST00000524534 PKD1L3Q7Z443 1732 aa13.27□□□□□ -0.28
PTPRK-217ENST00000524534 ABCC12Q96J65 1359 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 TADA3O75528 432 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 SERPINC1P01008 464 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 PLA2G4AP47712 749 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 VPS37DQ86XT2 251 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 MAP3K14Q99558 947 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 ALG1Q9BT22 464 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 FBXO3Q9UK99 471 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 AKAP2Q9Y2D5 859 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 PNOCQ13519 176 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 SCARF1Q14162 830 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 CFAP100Q494V2 611 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 TMEM139Q8IV31 216 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 UBXN4Q92575 508 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 AIFM3Q96NN9 605 aa13.27□□□□□ -0.29
PTPRK-217ENST00000524534 NOL10Q9BSC4 688 aaKnown RBP13.27□□□□□ -0.29
PTPRK-217ENST00000524534 UTP14AQ9BVJ6 771 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms