RNA–Protein interactions for RNA: ENST00000523805.5

PTK2-253, Transcript of protein tyrosine kinase 2, human

TSL 3

Gene PTK2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-253	ENST00000523805	UTP14A	Q9BVJ6	771 aa	Known RBP	10.46	□□□□□ -0.73
PTK2-253	ENST00000523805	CHPF2	Q9P2E5	772 aa		10.46	□□□□□ -0.73
PTK2-253	ENST00000523805	HACL1	Q9UJ83	578 aa		10.46	□□□□□ -0.73
PTK2-253	ENST00000523805	TRPM7	Q96QT4	1865 aa		10.46	□□□□□ -0.74
PTK2-253	ENST00000523805	COL4A1	P02462	1669 aa		10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	ABCC4	O15439	1325 aa		10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	PPIP5K2	O43314	1243 aa		10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	WIPF1	O43516	503 aa		10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	EIF6	P56537	245 aa	Known RBP	10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	KCNH2	Q12809	1159 aa		10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	PARP10	Q53GL7	1025 aa		10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	RTL5	Q5HYW3	569 aa	Predicted RBP	10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	LCE2C	Q5TA81	110 aa		10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	LRP10	Q7Z4F1	713 aa		10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	LDHD	Q86WU2	507 aa		10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	JMY	Q8N9B5	988 aa		10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	RUNDC1	Q96C34	613 aa		10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	NLRP3	Q96P20	1036 aa		10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	ADAMTS8	Q9UP79	889 aa		10.45	□□□□□ -0.74
PTK2-253	ENST00000523805	LRRC37A	A6NMS7	1700 aa		10.44	□□□□□ -0.74
PTK2-253	ENST00000523805	AOC3	Q16853	763 aa		10.44	□□□□□ -0.74
PTK2-253	ENST00000523805	HDGFL1	Q5TGJ6	251 aa		10.44	□□□□□ -0.74
PTK2-253	ENST00000523805	MAP1S	Q66K74	1059 aa	Predicted RBP	10.44	□□□□□ -0.74
PTK2-253	ENST00000523805	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.44	□□□□□ -0.74
PTK2-253	ENST00000523805	NIM1K	Q8IY84	436 aa		10.44	□□□□□ -0.74
PTK2-253	ENST00000523805	TBC1D2	Q9BYX2	928 aa		10.44	□□□□□ -0.74
PTK2-253	ENST00000523805	TRMT112	Q9UI30	125 aa	Known RBP	10.44	□□□□□ -0.74
PTK2-253	ENST00000523805	ATP5J2-PTCD1	G3V325	749 aa		10.43	□□□□□ -0.74
PTK2-253	ENST00000523805	FZD9	O00144	591 aa		10.43	□□□□□ -0.74
PTK2-253	ENST00000523805	LMOD1	P29536	600 aa	Predicted RBP	10.43	□□□□□ -0.74
PTK2-253	ENST00000523805	HOXA10	P31260	410 aa	Predicted RBP	10.43	□□□□□ -0.74
PTK2-253	ENST00000523805	DIXDC1	Q155Q3	683 aa		10.43	□□□□□ -0.74
PTK2-253	ENST00000523805	NLRP10	Q86W26	655 aa		10.43	□□□□□ -0.74
PTK2-253	ENST00000523805	ZNF511	Q8NB15	262 aa		10.43	□□□□□ -0.74
PTK2-253	ENST00000523805	CRAMP1	Q96RY5	1269 aa		10.43	□□□□□ -0.74
PTK2-253	ENST00000523805	PSMD1	Q99460	953 aa		10.43	□□□□□ -0.74
PTK2-253	ENST00000523805	TMX4	Q9H1E5	349 aa	Predicted RBP	10.43	□□□□□ -0.74
PTK2-253	ENST00000523805	DUOX1	Q9NRD9	1551 aa		10.43	□□□□□ -0.74
PTK2-253	ENST00000523805	SH3TC1	Q8TE82	1336 aa		10.42	□□□□□ -0.74
PTK2-253	ENST00000523805	ELL2	O00472	640 aa	Predicted RBP	10.42	□□□□□ -0.74
PTK2-253	ENST00000523805	CHL1	O00533	1208 aa		10.42	□□□□□ -0.74
PTK2-253	ENST00000523805	FMR1	Q06787	632 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
PTK2-253	ENST00000523805	GRM1	Q13255	1194 aa		10.42	□□□□□ -0.74
PTK2-253	ENST00000523805	LINC01559	Q495D7	138 aa		10.42	□□□□□ -0.74
PTK2-253	ENST00000523805	HSP90AB3P	Q58FF7	597 aa		10.42	□□□□□ -0.74
PTK2-253	ENST00000523805	CC2D2B	Q6DHV5	1058 aa		10.42	□□□□□ -0.74
PTK2-253	ENST00000523805	TNS4	Q8IZW8	715 aa		10.42	□□□□□ -0.74
PTK2-253	ENST00000523805	GPC2	Q8N158	579 aa		10.42	□□□□□ -0.74
PTK2-253	ENST00000523805	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
PTK2-253	ENST00000523805	TLL2	Q9Y6L7	1015 aa		10.42	□□□□□ -0.74
PTK2-253	ENST00000523805	MYH3	P11055	1940 aa		10.42	□□□□□ -0.74
PTK2-253	ENST00000523805	PASK	Q96RG2	1323 aa		10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	APAF1	O14727	1248 aa		10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	TERT	O14746	1132 aa	Known RBP	10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	TRIM66	O15016	1216 aa		10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	SPTLC1	O15269	473 aa		10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	EPS15	P42566	896 aa		10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	TCIRG1	Q13488	830 aa		10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	DUSP27	Q5VZP5	1158 aa		10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	DPP8	Q6V1X1	898 aa	Predicted RBP	10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	DDX46	Q7L014	1031 aa	Known RBP	10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	TRIM46	Q7Z4K8	759 aa		10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	MPND	Q8N594	471 aa		10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	BAP1	Q92560	729 aa		10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	MBIP	Q9NS73	344 aa		10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	BABAM1	Q9NWV8	329 aa		10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	WASF2	Q9Y6W5	498 aa		10.41	□□□□□ -0.74
PTK2-253	ENST00000523805	CNTNAP1	P78357	1384 aa		10.4	□□□□□ -0.74
PTK2-253	ENST00000523805	POLR2A	P24928	1970 aa	Known RBP	10.4	□□□□□ -0.74
PTK2-253	ENST00000523805	TMEM88B	A6NKF7	163 aa		10.4	□□□□□ -0.74
PTK2-253	ENST00000523805	BMP1	P13497	986 aa		10.4	□□□□□ -0.74
PTK2-253	ENST00000523805	SCNN1D	P51172	638 aa		10.4	□□□□□ -0.74
PTK2-253	ENST00000523805	LYPD8	Q6UX82	237 aa		10.4	□□□□□ -0.74
PTK2-253	ENST00000523805	CNTROB	Q8N137	903 aa		10.4	□□□□□ -0.74
PTK2-253	ENST00000523805	FAM89A	Q96GI7	184 aa		10.4	□□□□□ -0.74
PTK2-253	ENST00000523805	ABT1	Q9ULW3	272 aa	Known RBP	10.4	□□□□□ -0.74
PTK2-253	ENST00000523805	ATP6V0A2	Q9Y487	856 aa		10.4	□□□□□ -0.74
PTK2-253	ENST00000523805	CFAP99	D6REC4	459 aa		10.39	□□□□□ -0.75
PTK2-253	ENST00000523805	CAPN5	O15484	640 aa	Predicted RBP	10.39	□□□□□ -0.75
PTK2-253	ENST00000523805	RAD17	O75943	681 aa		10.39	□□□□□ -0.75
PTK2-253	ENST00000523805	GRAP	Q13588	217 aa		10.39	□□□□□ -0.75
PTK2-253	ENST00000523805	SLC10A5	Q5PT55	438 aa		10.39	□□□□□ -0.75
PTK2-253	ENST00000523805	PNMA8A	Q86V59	439 aa	Predicted RBP	10.39	□□□□□ -0.75
PTK2-253	ENST00000523805	PLBD2	Q8NHP8	589 aa		10.39	□□□□□ -0.75
PTK2-253	ENST00000523805	GRAPL	Q8TC17	118 aa	Predicted RBP	10.39	□□□□□ -0.75
PTK2-253	ENST00000523805	JARID2	Q92833	1246 aa	Predicted RBP	10.39	□□□□□ -0.75
PTK2-253	ENST00000523805	GPR101	Q96P66	508 aa	Predicted RBP	10.39	□□□□□ -0.75
PTK2-253	ENST00000523805	DBF4	Q9UBU7	674 aa	Predicted RBP	10.39	□□□□□ -0.75
PTK2-253	ENST00000523805	PCDHB15	Q9Y5E8	787 aa		10.39	□□□□□ -0.75
PTK2-253	ENST00000523805	SCN9A	Q15858	1988 aa		10.39	□□□□□ -0.75
PTK2-253	ENST00000523805	TRAF5	O00463	557 aa		10.38	□□□□□ -0.75
PTK2-253	ENST00000523805	VARS	P26640	1264 aa	Known RBP	10.38	□□□□□ -0.75
PTK2-253	ENST00000523805	VEGFB	P49765	207 aa		10.38	□□□□□ -0.75
PTK2-253	ENST00000523805	RIC3	Q7Z5B4	369 aa		10.38	□□□□□ -0.75
PTK2-253	ENST00000523805	SUPT20H	Q8NEM7	779 aa		10.38	□□□□□ -0.75
PTK2-253	ENST00000523805	CELF1	Q92879	486 aa	Known RBP	10.38	□□□□□ -0.75
PTK2-253	ENST00000523805	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.38	□□□□□ -0.75
PTK2-253	ENST00000523805	BCL2L13	Q9BXK5	485 aa		10.38	□□□□□ -0.75
PTK2-253	ENST00000523805	PHAX	Q9H814	394 aa	Known RBP	10.38	□□□□□ -0.75

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